RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Tbx4P70325 552 aa22.15■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Tra2aQ6PFR5 281 aaKnown RBP22.15■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Olfr1418Q7TQS3 318 aa22.15■■□□□ 1.14
Upf3a-201ENSMUST00000043767 RragdQ7TT45 449 aa22.15■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Trim50Q810I2 483 aa22.15■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Gm26657Q9CVR1 127 aa22.15■■□□□ 1.14
Upf3a-201ENSMUST00000043767 P33monoxQ9DBN4 303 aa22.15■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Sppl2aQ9JJF9 523 aa22.15■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Fem1aaQ9Z2G1 654 aa22.15■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Unc13cQ8K0T7 2210 aa22.14■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Mup6A2AV72 179 aa22.14■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Slfn9B1ARD6 910 aa22.14■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Capn5O08688 640 aaKnown RBP22.14■■□□□ 1.13
Upf3a-201ENSMUST00000043767 H2-M3Q31093 336 aa22.14■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Nr1h2Q60644 446 aa22.14■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Zfp324Q78F42 583 aa22.14■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Olfr320Q7TRZ4 306 aa22.14■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Galnt7Q80VA0 657 aa22.14■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Fndc11Q80WB0 326 aa22.14■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Rnf38Q8BI21 518 aa22.14■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Peli3Q8BXR6 445 aa22.14■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Nkiras1Q8CEC5 192 aa22.14■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Olfr1310Q8VF85 312 aa22.14■■□□□ 1.13
Upf3a-201ENSMUST00000043767 BsndQ8VIM4 307 aa22.14■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Mrpl37Q921S7 423 aaKnown RBP22.14■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Fam69bQ99ML4 431 aa22.14■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Asf1aQ9CQE6 204 aa22.14■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Stx12Q9ER00 274 aa22.14■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Rnf11Q9QYK7 154 aa22.14■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Fer1l5P0DM40 2038 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Igkv6-20A0A140T8P2 115 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Actl10A2AKE7 346 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Zfp352A2AML7 551 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 FgaE9PV24 789 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Psmd3P14685 530 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Hoxb9P20615 250 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Ccr3P51678 359 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Arl1P61211 181 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Fgf14P70379 247 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Slc45a4Q0P5V9 785 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Q3KNL4 93 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Fam189a1Q6A044 515 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Zzz3Q6KAQ7 910 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Ubfd1Q78JW9 368 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 PigtQ8BXQ2 582 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Galnt13Q8CF93 556 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Gpr18Q8K1Z6 331 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Vmn1r33Q8R2E0 305 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Cxxc5Q91WA4 317 aaKnown RBP22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Rab28Q99KL7 221 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Nudt14Q9D142 222 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Phospho2Q9D9M5 241 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Prl8a6Q9DAY2 240 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Syvn1Q9DBY1 612 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Gipc1Q9Z0G0 333 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Ssc4dA1L0T3 586 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Tmem245B1AZA5 876 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 G430095P16RikE9Q913 147 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Wbp1P97764 304 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Riiad1Q3KNY5 119 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Ag2Q3UPL5 249 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Gm11992Q5SS90 291 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Olfr1051Q7TR76 308 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Olfr295Q7TS08 309 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 SvopQ8BFT9 548 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Arhgap28Q8BN58 729 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Slc44a2Q8BY89 706 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Samd4aQ8CBY1 711 aaKnown RBP22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Rdh13Q8CEE7 334 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Trnt1Q8K1J6 434 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Klrb1fQ8VD98 217 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Syt17Q920M7 470 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Cyp2j9Q924D1 502 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 AasdhpptQ9CQF6 309 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Trpv4Q9EPK8 871 aa22.13■■□□□ 1.13
Upf3a-201ENSMUST00000043767 4921501E09RikA0A0R4J054 908 aa22.12■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Tgfb3P17125 410 aa22.12■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Impdh2P24547 514 aa22.12■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Fitm2P59266 262 aa22.12■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Naa20P61600 178 aa22.12■■□□□ 1.13
Upf3a-201ENSMUST00000043767 KdsrQ6GV12 332 aa22.12■■□□□ 1.13
Upf3a-201ENSMUST00000043767 IfneQ80ZF2 192 aa22.12■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Trmt2bQ8BQJ6 493 aa22.12■■□□□ 1.13
Upf3a-201ENSMUST00000043767 BtdQ8CIF4 520 aa22.12■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Mptx1Q8R1M8 219 aa22.12■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Uqcc2Q9CQY6 136 aa22.12■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Atp5oQ9DB20 213 aaKnown RBP22.12■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Rgs3Q9DC04 966 aa22.12■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Epb41l1Q9Z2H5 879 aa22.12■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Ceacam1P31809 521 aa22.11■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Psme3P61290 254 aa22.11■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Txnl4aP83877 142 aa22.11■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Bmp1P98063 991 aa22.11■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Zc3h12aQ5D1E7 596 aa22.11■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Akt2Q60823 481 aa22.11■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Cmtr2Q8BWQ4 767 aa22.11■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Nfatc4Q8K120 901 aa22.11■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Ceacam2Q925P2 520 aa22.11■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Cyc1Q9D0M3 325 aaKnown RBP22.11■■□□□ 1.13
Upf3a-201ENSMUST00000043767 Cts6Q9ET52 334 aa22.11■■□□□ 1.13
Retrieved 100 of 22,080 RNA–protein pairs in 24.2 ms