RNA–Protein interactions for RNA: ENST00000641746.1

CASC19-256, Transcript of cancer susceptibility 19, human

Gene CASC19, Length 958 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-256	ENST00000641746	VPS50	Q96JG6	964 aa		5.05	□□□□□ -1.6
CASC19-256	ENST00000641746	TCEANC2	Q96MN5	208 aa		5.05	□□□□□ -1.6
CASC19-256	ENST00000641746	ZNF560	Q96MR9	790 aa		5.05	□□□□□ -1.6
CASC19-256	ENST00000641746	TEFM	Q96QE5	360 aa	Known RBP	5.05	□□□□□ -1.6
CASC19-256	ENST00000641746	LRRC61	Q9BV99	259 aa		5.05	□□□□□ -1.6
CASC19-256	ENST00000641746	NUDT9	Q9BW91	350 aa		5.05	□□□□□ -1.6
CASC19-256	ENST00000641746	COPS7B	Q9H9Q2	264 aa	Predicted RBP	5.05	□□□□□ -1.6
CASC19-256	ENST00000641746	SAYSD1	Q9NPB0	183 aa		5.05	□□□□□ -1.6
CASC19-256	ENST00000641746	SNTG1	Q9NSN8	517 aa		5.05	□□□□□ -1.6
CASC19-256	ENST00000641746	TMEM30A	Q9NV96	361 aa		5.05	□□□□□ -1.6
CASC19-256	ENST00000641746	TAS2R3	Q9NYW6	316 aa		5.05	□□□□□ -1.6
CASC19-256	ENST00000641746	HOOK1	Q9UJC3	728 aa	Known RBP	5.05	□□□□□ -1.6
CASC19-256	ENST00000641746	APPL1	Q9UKG1	709 aa		5.05	□□□□□ -1.6
CASC19-256	ENST00000641746	CDH9	Q9ULB4	789 aa		5.05	□□□□□ -1.6
CASC19-256	ENST00000641746	LIMCH1	Q9UPQ0	1083 aa		5.05	□□□□□ -1.6
CASC19-256	ENST00000641746	ZNF510	Q9Y2H8	683 aa		5.05	□□□□□ -1.6
CASC19-256	ENST00000641746	CAB39	Q9Y376	341 aa	Predicted RBP	5.05	□□□□□ -1.6
CASC19-256	ENST00000641746	TMED5	Q9Y3A6	229 aa		5.05	□□□□□ -1.6
CASC19-256	ENST00000641746	SNX9	Q9Y5X1	595 aa		5.05	□□□□□ -1.6
CASC19-256	ENST00000641746	CKAP5	Q14008	2032 aa		5.05	□□□□□ -1.6
CASC19-256	ENST00000641746	TNRC6A	Q8NDV7	1962 aa	Known RBP	5.05	□□□□□ -1.6
CASC19-256	ENST00000641746	SCN8A	Q9UQD0	1980 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746		A0A088AWK7	358 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	TRGV8	A0A0C4DH27	118 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746		A0A0G2JPF8	293 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	HMX3	A6NHT5	357 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	CGB1	A6NKQ9	187 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	HNRNPCL3	B7ZW38	293 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	CCL21	O00585	134 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	E2F3	O00716	465 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	ADAM20	O43506	726 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	TSPAN9	O75954	239 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	TUBB4A	P04350	444 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	CYP1A2	P05177	515 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	HNRNPCL4	P0DMR1	293 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	PECAM1	P16284	738 aa	Predicted RBP	5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	GCFC2	P16383	781 aa	Known RBP	5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	PBX1	P40424	430 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	PNPLA4	P41247	253 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	ZNF81	P51508	661 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	PRKAA2	P54646	552 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	CNTN1	Q12860	1018 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	TBCE	Q15813	527 aa	Predicted RBP	5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	ZNF284	Q2VY69	593 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	C2orf76	Q3KRA6	126 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	MPPE1	Q53F39	396 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	MDH1B	Q5I0G3	518 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	TPRG1L	Q5T0D9	272 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	ATPAF1	Q5TC12	328 aa	Predicted RBP	5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	METRNL	Q641Q3	311 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	PODNL1	Q6PEZ8	512 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	C16orf47	Q6ZP98	133 aa	Predicted RBP	5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	KCNK18	Q7Z418	384 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	CPLX4	Q7Z7G2	160 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	SLC47A2	Q86VL8	602 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	KRT73	Q86Y46	540 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	TAGAP	Q8N103	731 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	CDYL2	Q8N8U2	506 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	ATP11C	Q8NB49	1132 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	ERMN	Q8TAM6	284 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	MYCBPAP	Q8TBZ2	947 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	NOC3L	Q8WTT2	800 aa	Known RBP	5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	VPS33A	Q96AX1	596 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	RNF125	Q96EQ8	232 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	GIMAP5	Q96F15	307 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	DHTKD1	Q96HY7	919 aa	Predicted RBP	5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	RAX2	Q96IS3	184 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	HIST1H2AH	Q96KK5	128 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	ZNF778	Q96MU6	729 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	KCNK16	Q96T55	309 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	HIST1H2AJ	Q99878	128 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	NUDT22	Q9BRQ3	303 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	ACPT	Q9BZG2	426 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	PLA2G12A	Q9BZM1	189 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	ZNF518B	Q9C0D4	1074 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	LIME1	Q9H400	295 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	CRLF2	Q9HC73	371 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	FGF21	Q9NSA1	209 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	PSD3	Q9NYI0	1048 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	LRIT1	Q9P2V4	623 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	MYO1A	Q9UBC5	1043 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	CPSF3	Q9UKF6	684 aa	Known RBP	5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	AGO1	Q9UL18	857 aa	Known RBP	5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	AGAP1	Q9UPQ3	857 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	DERA	Q9Y315	318 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	CYP46A1	Q9Y6A2	500 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	SESN1	Q9Y6P5	492 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	FAM169A	Q9Y6X4	670 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	DOCK9	Q9BZ29	2069 aa		5.04	□□□□□ -1.6
CASC19-256	ENST00000641746	MXRA5	Q9NR99	2828 aa		5.03	□□□□□ -1.6
CASC19-256	ENST00000641746	EDDM13	A0A1B0GTR0	161 aa		5.03	□□□□□ -1.6
CASC19-256	ENST00000641746	SERINC4	A6NH21	518 aa		5.03	□□□□□ -1.6
CASC19-256	ENST00000641746	CCDC154	A6NI56	674 aa		5.03	□□□□□ -1.6
CASC19-256	ENST00000641746	GOLGA6L10	A6NI86	522 aa		5.03	□□□□□ -1.6
CASC19-256	ENST00000641746	PTGES3L	E9PB15	166 aa		5.03	□□□□□ -1.6
CASC19-256	ENST00000641746	CLDN5	O00501	218 aa		5.03	□□□□□ -1.6
CASC19-256	ENST00000641746	OGT	O15294	1046 aa		5.03	□□□□□ -1.6
CASC19-256	ENST00000641746	B4GAT1	O43505	415 aa		5.03	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms