RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 C12orf4Q9NQ89 552 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 EVA1BQ9NVM1 165 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 FLRT1Q9NZU1 646 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 HS3ST4Q9Y661 456 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 MYO7AQ13402 2215 aa13.36□□□□□ -0.27
SCARB2-227ENST00000640957 PTGESO14684 152 aa13.36□□□□□ -0.27
SCARB2-227ENST00000640957 ERN1O75460 977 aaKnown RBP13.36□□□□□ -0.27
SCARB2-227ENST00000640957 ADORA3P0DMS8 318 aa13.36□□□□□ -0.27
SCARB2-227ENST00000640957 PSKH1P11801 424 aa13.36□□□□□ -0.27
SCARB2-227ENST00000640957 IL12RB1P42701 662 aa13.36□□□□□ -0.27
SCARB2-227ENST00000640957 RGS6P49758 472 aa13.36□□□□□ -0.27
SCARB2-227ENST00000640957 ZNF45Q02386 682 aa13.36□□□□□ -0.27
SCARB2-227ENST00000640957 GPR50Q13585 617 aa13.36□□□□□ -0.27
SCARB2-227ENST00000640957 CDH18Q13634 790 aa13.36□□□□□ -0.27
SCARB2-227ENST00000640957 MFSD14CQ5VZR4 134 aa13.36□□□□□ -0.27
SCARB2-227ENST00000640957 C2orf69Q8N8R5 385 aa13.36□□□□□ -0.27
SCARB2-227ENST00000640957 ZSCAN5AQ9BUG6 496 aa13.36□□□□□ -0.27
SCARB2-227ENST00000640957 SLC25A51Q9H1U9 297 aa13.36□□□□□ -0.27
SCARB2-227ENST00000640957 GORASP2Q9H8Y8 452 aa13.36□□□□□ -0.27
SCARB2-227ENST00000640957 IL1RAPQ9NPH3 570 aa13.36□□□□□ -0.27
SCARB2-227ENST00000640957 TMPRSS11EQ9UL52 423 aa13.36□□□□□ -0.27
SCARB2-227ENST00000640957 DNAH14Q0VDD8 3507 aa13.36□□□□□ -0.27
SCARB2-227ENST00000640957 A0A0B4J293 547 aa13.36□□□□□ -0.27
SCARB2-227ENST00000640957 MYADML2A6NDP7 307 aa13.36□□□□□ -0.27
SCARB2-227ENST00000640957 FAM227AF5H4B4 570 aa13.36□□□□□ -0.27
SCARB2-227ENST00000640957 SCAPQ12770 1279 aa13.36□□□□□ -0.27
SCARB2-227ENST00000640957 SPATA2LQ8IUW3 424 aaPredicted RBP13.36□□□□□ -0.27
SCARB2-227ENST00000640957 SLC43A3Q8NBI5 491 aa13.36□□□□□ -0.27
SCARB2-227ENST00000640957 OR8H1Q8NGG4 311 aa13.36□□□□□ -0.27
SCARB2-227ENST00000640957 RNF31Q96EP0 1072 aa13.36□□□□□ -0.27
SCARB2-227ENST00000640957 HSH2DQ96JZ2 352 aa13.36□□□□□ -0.27
SCARB2-227ENST00000640957 SLC9A7Q96T83 725 aa13.36□□□□□ -0.27
SCARB2-227ENST00000640957 FEVQ99581 238 aa13.36□□□□□ -0.27
SCARB2-227ENST00000640957 PTPN18Q99952 460 aa13.36□□□□□ -0.27
SCARB2-227ENST00000640957 LINC00597Q9H2U6 94 aa13.36□□□□□ -0.27
SCARB2-227ENST00000640957 TFB2MQ9H5Q4 396 aaKnown RBP13.36□□□□□ -0.27
SCARB2-227ENST00000640957 MS4A12Q9NXJ0 267 aa13.36□□□□□ -0.27
SCARB2-227ENST00000640957 RAPGEFL1Q9UHV5 662 aa13.36□□□□□ -0.27
SCARB2-227ENST00000640957 TRMT6Q9UJA5 497 aaKnown RBP13.36□□□□□ -0.27
SCARB2-227ENST00000640957 PCDHGC4Q9Y5F7 938 aa13.36□□□□□ -0.27
SCARB2-227ENST00000640957 PCDHGA6Q9Y5G7 932 aa13.36□□□□□ -0.27
SCARB2-227ENST00000640957 CCDC182A6NF36 153 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 NUPL2O15504 423 aaKnown RBP13.35□□□□□ -0.27
SCARB2-227ENST00000640957 SERPINF2P08697 491 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 ZNF250P15622 560 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 RRM2P31350 389 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 NRIP1P48552 1158 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 NFKB2Q00653 900 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 EFEMP1Q12805 493 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 GPAT3Q53EU6 434 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 COQ5Q5HYK3 327 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 WDR36Q8NI36 951 aaKnown RBP13.35□□□□□ -0.27
SCARB2-227ENST00000640957 C11orf54Q9H0W9 315 aaPredicted RBP13.35□□□□□ -0.27
SCARB2-227ENST00000640957 FAM105AQ9NUU6 356 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 FKBPLQ9UIM3 349 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 EVPLLA8MZ36 301 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 CYP2A6P11509 494 aaPredicted RBP13.35□□□□□ -0.27
SCARB2-227ENST00000640957 IL7P13232 177 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 CD52P31358 61 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 SOX6P35712 828 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 STC1P52823 247 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 DDX39BQ13838 428 aaKnown RBP13.35□□□□□ -0.27
SCARB2-227ENST00000640957 EFR3AQ14156 821 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 FLYWCH1Q4VC44 716 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 BHLHA9Q7RTU4 235 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 SLC46A3Q7Z3Q1 461 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 GLRX5Q86SX6 157 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 SKA2Q8WVK7 121 aaPredicted RBP13.35□□□□□ -0.27
SCARB2-227ENST00000640957 IMP4Q96G21 291 aaKnown RBP13.35□□□□□ -0.27
SCARB2-227ENST00000640957 ASB2Q96Q27 587 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 C1QTNF6Q9BXI9 259 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 REEP1Q9H902 201 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 NMUR1Q9HB89 426 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 NEU3Q9UQ49 428 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 PCDHGB1Q9Y5G3 927 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 CLDN24A6NM45 220 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 HAS3O00219 553 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 VPS4BO75351 444 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 GPX5O75715 221 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 WISP3O95389 354 aaPredicted RBP13.35□□□□□ -0.27
SCARB2-227ENST00000640957 YES1P07947 543 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 HNF4AP41235 474 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 SMSP52788 366 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 SLC14A2Q15849 920 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.35□□□□□ -0.27
SCARB2-227ENST00000640957 OVOS1Q6IE37 1185 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 SHQ1Q6PI26 577 aaKnown RBP13.35□□□□□ -0.27
SCARB2-227ENST00000640957 RGL4Q8IZJ4 473 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 DPP10Q8N608 796 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 OR4M1Q8NGD0 313 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 OR9Q2Q8NGE9 314 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 SLC7A6Q92536 515 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 MYEOVQ96EZ4 313 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 PDLIM5Q96HC4 596 aaKnown RBP13.35□□□□□ -0.27
SCARB2-227ENST00000640957 RDH12Q96NR8 316 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 TSGA13Q96PP4 275 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 BARHL1Q9BZE3 327 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 CATSPERBQ9H7T0 1116 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 RRAGCQ9HB90 399 aa13.35□□□□□ -0.27
SCARB2-227ENST00000640957 CLEC2DQ9UHP7 191 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms