RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 OR7A2PQ8NGA2 310 aa3.89□□□□□ -1.79
CCDC7-216ENST00000640058 LRRC15Q8TF66 581 aa3.89□□□□□ -1.79
CCDC7-216ENST00000640058 FAM71F1Q96KD3 344 aaPredicted RBP3.89□□□□□ -1.79
CCDC7-216ENST00000640058 C2orf48Q96LS8 159 aa3.89□□□□□ -1.79
CCDC7-216ENST00000640058 ZNF830Q96NB3 372 aaPredicted RBP3.89□□□□□ -1.79
CCDC7-216ENST00000640058 MRPL1Q9BYD6 325 aaKnown RBP3.89□□□□□ -1.79
CCDC7-216ENST00000640058 KLHL4Q9C0H6 718 aa3.89□□□□□ -1.79
CCDC7-216ENST00000640058 GDE1Q9NZC3 331 aa3.89□□□□□ -1.79
CCDC7-216ENST00000640058 TMEM5Q9Y2B1 443 aa3.89□□□□□ -1.79
CCDC7-216ENST00000640058 ZNF510Q9Y2H8 683 aa3.89□□□□□ -1.79
CCDC7-216ENST00000640058 RPS6KL1Q9Y6S9 549 aa3.89□□□□□ -1.79
CCDC7-216ENST00000640058 ANKRD18BA2A2Z9 1011 aa3.88□□□□□ -1.79
CCDC7-216ENST00000640058 A8MXK9 166 aa3.88□□□□□ -1.79
CCDC7-216ENST00000640058 H0YAE9 185 aa3.88□□□□□ -1.79
CCDC7-216ENST00000640058 BEST1O76090 585 aa3.88□□□□□ -1.79
CCDC7-216ENST00000640058 LINGO3P0C6S8 592 aa3.88□□□□□ -1.79
CCDC7-216ENST00000640058 ACTN2P35609 894 aa3.88□□□□□ -1.79
CCDC7-216ENST00000640058 CLNS1AP54105 237 aaKnown RBP3.88□□□□□ -1.79
CCDC7-216ENST00000640058 UBXN2AP68543 259 aa3.88□□□□□ -1.79
CCDC7-216ENST00000640058 MYL7Q01449 175 aa3.88□□□□□ -1.79
CCDC7-216ENST00000640058 CD300CQ08708 224 aa3.88□□□□□ -1.79
CCDC7-216ENST00000640058 PRR27Q6MZM9 219 aa3.88□□□□□ -1.79
CCDC7-216ENST00000640058 CHMP1BQ7LBR1 199 aa3.88□□□□□ -1.79
CCDC7-216ENST00000640058 SLC39A11Q8N1S5 342 aa3.88□□□□□ -1.79
CCDC7-216ENST00000640058 ABHD12Q8N2K0 398 aa3.88□□□□□ -1.79
CCDC7-216ENST00000640058 TEKT4Q8WW24 435 aa3.88□□□□□ -1.79
CCDC7-216ENST00000640058 FAM218AQ96MZ4 157 aa3.88□□□□□ -1.79
CCDC7-216ENST00000640058 GCNAQ96QF7 691 aa3.88□□□□□ -1.79
CCDC7-216ENST00000640058 ZNF577Q9BSK1 485 aa3.88□□□□□ -1.79
CCDC7-216ENST00000640058 RPP25Q9BUL9 199 aaKnown RBP3.88□□□□□ -1.79
CCDC7-216ENST00000640058 PRRG4Q9BZD6 226 aa3.88□□□□□ -1.79
CCDC7-216ENST00000640058 ZMYND12Q9H0C1 365 aa3.88□□□□□ -1.79
CCDC7-216ENST00000640058 HAO2Q9NYQ3 351 aa3.88□□□□□ -1.79
CCDC7-216ENST00000640058 CPSF2Q9P2I0 782 aaKnown RBP3.88□□□□□ -1.79
CCDC7-216ENST00000640058 CPSF3Q9UKF6 684 aaKnown RBP3.88□□□□□ -1.79
CCDC7-216ENST00000640058 CHKBQ9Y259 395 aa3.88□□□□□ -1.79
CCDC7-216ENST00000640058 TRBV5-5A0A0J9YX44 114 aa3.87□□□□□ -1.79
CCDC7-216ENST00000640058 A0A1W2PPQ1 181 aa3.87□□□□□ -1.79
CCDC7-216ENST00000640058 ACOD1A6NK06 481 aa3.87□□□□□ -1.79
CCDC7-216ENST00000640058 SRRM5B3KS81 715 aa3.87□□□□□ -1.79
CCDC7-216ENST00000640058 ACSL3O95573 720 aa3.87□□□□□ -1.79
CCDC7-216ENST00000640058 ATP1B1P05026 303 aa3.87□□□□□ -1.79
CCDC7-216ENST00000640058 ITIH1P19827 911 aa3.87□□□□□ -1.79
CCDC7-216ENST00000640058 IRX4P78413 519 aa3.87□□□□□ -1.79
CCDC7-216ENST00000640058 ZFP36L1Q07352 338 aaKnown RBP3.87□□□□□ -1.79
CCDC7-216ENST00000640058 PTPN14Q15678 1187 aa3.87□□□□□ -1.79
CCDC7-216ENST00000640058 TAB1Q15750 504 aa3.87□□□□□ -1.79
CCDC7-216ENST00000640058 GPR33Q49SQ1 333 aa3.87□□□□□ -1.79
CCDC7-216ENST00000640058 ZER1Q7Z7L7 766 aa3.87□□□□□ -1.79
CCDC7-216ENST00000640058 MOB3AQ96BX8 217 aa3.87□□□□□ -1.79
CCDC7-216ENST00000640058 PDLIM5Q96HC4 596 aaKnown RBP3.87□□□□□ -1.79
CCDC7-216ENST00000640058 CCDC106Q9BWC9 280 aa3.87□□□□□ -1.79
CCDC7-216ENST00000640058 MTMR12Q9C0I1 747 aa3.87□□□□□ -1.79
CCDC7-216ENST00000640058 HOXD1Q9GZZ0 328 aa3.87□□□□□ -1.79
CCDC7-216ENST00000640058 Q9H8V8 135 aa3.87□□□□□ -1.79
CCDC7-216ENST00000640058 GNB4Q9HAV0 340 aa3.87□□□□□ -1.79
CCDC7-216ENST00000640058 GPR83Q9NYM4 423 aa3.87□□□□□ -1.79
CCDC7-216ENST00000640058 CHORDC1Q9UHD1 332 aaPredicted RBP3.87□□□□□ -1.79
CCDC7-216ENST00000640058 WIPI2Q9Y4P8 454 aa3.87□□□□□ -1.79
CCDC7-216ENST00000640058 IGLV3-10A0A075B6K4 115 aa3.86□□□□□ -1.79
CCDC7-216ENST00000640058 LOC105371242A0A075B767 164 aa3.86□□□□□ -1.79
CCDC7-216ENST00000640058 TRBV4-1A0A0J9YWV2 114 aa3.86□□□□□ -1.79
CCDC7-216ENST00000640058 A0A1W2PPM1 405 aa3.86□□□□□ -1.79
CCDC7-216ENST00000640058 TRIM77I1YAP6 450 aa3.86□□□□□ -1.79
CCDC7-216ENST00000640058 CCL24O00175 119 aa3.86□□□□□ -1.79
CCDC7-216ENST00000640058 CLCN4P51793 760 aa3.86□□□□□ -1.79
CCDC7-216ENST00000640058 VAMP7P51809 220 aa3.86□□□□□ -1.79
CCDC7-216ENST00000640058 CUL3Q13618 768 aa3.86□□□□□ -1.79
CCDC7-216ENST00000640058 ITGA7Q13683 1181 aa3.86□□□□□ -1.79
CCDC7-216ENST00000640058 OR4A47Q6IF82 309 aa3.86□□□□□ -1.79
CCDC7-216ENST00000640058 NDUFAF2Q8N183 169 aa3.86□□□□□ -1.79
CCDC7-216ENST00000640058 TSPAN14Q8NG11 270 aa3.86□□□□□ -1.79
CCDC7-216ENST00000640058 SECISBP2LQ93073 1101 aaKnown RBP3.86□□□□□ -1.79
CCDC7-216ENST00000640058 DGAT2Q96PD7 388 aa3.86□□□□□ -1.79
CCDC7-216ENST00000640058 OLAHQ9NV23 265 aa3.86□□□□□ -1.79
CCDC7-216ENST00000640058 DDX25Q9UHL0 483 aaKnown RBP3.86□□□□□ -1.79
CCDC7-216ENST00000640058 TFECO14948 347 aaPredicted RBP3.85□□□□□ -1.79
CCDC7-216ENST00000640058 POP4O95707 220 aaKnown RBP3.85□□□□□ -1.79
CCDC7-216ENST00000640058 ABCB1P08183 1280 aaPredicted RBP3.85□□□□□ -1.79
CCDC7-216ENST00000640058 AZGP1P25311 298 aaKnown RBP3.85□□□□□ -1.79
CCDC7-216ENST00000640058 CAPGP40121 348 aa3.85□□□□□ -1.79
CCDC7-216ENST00000640058 OR3A2P47893 321 aa3.85□□□□□ -1.79
CCDC7-216ENST00000640058 LIG4P49917 911 aa3.85□□□□□ -1.79
CCDC7-216ENST00000640058 KRTAP12-2P59991 146 aa3.85□□□□□ -1.79
CCDC7-216ENST00000640058 TRAP1Q12931 704 aaKnown RBP3.85□□□□□ -1.79
CCDC7-216ENST00000640058 TRIM29Q14134 588 aa3.85□□□□□ -1.79
CCDC7-216ENST00000640058 IL11RAQ14626 422 aa3.85□□□□□ -1.79
CCDC7-216ENST00000640058 GARNL3Q5VVW2 1013 aa3.85□□□□□ -1.79
CCDC7-216ENST00000640058 FAM198BQ6UWH4 519 aa3.85□□□□□ -1.79
CCDC7-216ENST00000640058 LCLAT1Q6UWP7 414 aa3.85□□□□□ -1.79
CCDC7-216ENST00000640058 CAMKMTQ7Z624 323 aa3.85□□□□□ -1.79
CCDC7-216ENST00000640058 C11orf53Q8IXP5 236 aa3.85□□□□□ -1.79
CCDC7-216ENST00000640058 LGMNQ99538 433 aa3.85□□□□□ -1.79
CCDC7-216ENST00000640058 OVOL2Q9BRP0 275 aa3.85□□□□□ -1.79
CCDC7-216ENST00000640058 SLC2A11Q9BYW1 496 aa3.85□□□□□ -1.79
CCDC7-216ENST00000640058 ANKZF1Q9H8Y5 726 aa3.85□□□□□ -1.79
CCDC7-216ENST00000640058 CNOT10Q9H9A5 744 aaKnown RBP3.85□□□□□ -1.79
CCDC7-216ENST00000640058 PA2G4Q9UQ80 394 aaKnown RBP3.85□□□□□ -1.79
CCDC7-216ENST00000640058 MAGED1Q9Y5V3 778 aaPredicted RBP3.85□□□□□ -1.79
CCDC7-216ENST00000640058 G3V2L1 256 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms