RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 RAD23AP54725 363 aa11.75□□□□□ -0.53
CLN8-212ENST00000637083 TPD52P55327 224 aaPredicted RBP11.75□□□□□ -0.53
CLN8-212ENST00000637083 VAC14Q08AM6 782 aa11.75□□□□□ -0.53
CLN8-212ENST00000637083 TOP3AQ13472 1001 aaPredicted RBP11.75□□□□□ -0.53
CLN8-212ENST00000637083 DOC2AQ14183 400 aa11.75□□□□□ -0.53
CLN8-212ENST00000637083 GTDC1Q4AE62 458 aa11.75□□□□□ -0.53
CLN8-212ENST00000637083 SPIN4Q56A73 249 aa11.75□□□□□ -0.53
CLN8-212ENST00000637083 OR4F3Q6IEY1 312 aa11.75□□□□□ -0.53
CLN8-212ENST00000637083 FBXO46Q6PJ61 603 aaPredicted RBP11.75□□□□□ -0.53
CLN8-212ENST00000637083 TMEM220Q6QAJ8 160 aa11.75□□□□□ -0.53
CLN8-212ENST00000637083 TBPL2Q6SJ96 375 aa11.75□□□□□ -0.53
CLN8-212ENST00000637083 GRASPQ7Z6J2 395 aaPredicted RBP11.75□□□□□ -0.53
CLN8-212ENST00000637083 THAP5Q7Z6K1 395 aa11.75□□□□□ -0.53
CLN8-212ENST00000637083 PHACTR4Q8IZ21 702 aa11.75□□□□□ -0.53
CLN8-212ENST00000637083 TMIEQ8NEW7 156 aa11.75□□□□□ -0.53
CLN8-212ENST00000637083 ZNF420Q8TAQ5 688 aaPredicted RBP11.75□□□□□ -0.53
CLN8-212ENST00000637083 PHOSPHO2Q8TCD6 241 aa11.75□□□□□ -0.53
CLN8-212ENST00000637083 MED8Q96G25 268 aa11.75□□□□□ -0.53
CLN8-212ENST00000637083 PRM3Q9NNZ6 103 aa11.75□□□□□ -0.53
CLN8-212ENST00000637083 THG1LQ9NWX6 298 aaKnown RBP11.75□□□□□ -0.53
CLN8-212ENST00000637083 CHD7Q9P2D1 2997 aa11.75□□□□□ -0.53
CLN8-212ENST00000637083 BLOC1S6Q9UL45 172 aa11.75□□□□□ -0.53
CLN8-212ENST00000637083 PPT2Q9UMR5 302 aa11.75□□□□□ -0.53
CLN8-212ENST00000637083 MRPS23Q9Y3D9 190 aaKnown RBP11.75□□□□□ -0.53
CLN8-212ENST00000637083 PLXNA2O75051 1894 aa11.75□□□□□ -0.53
CLN8-212ENST00000637083 MYO7AQ13402 2215 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 A0A1B0GTW7 788 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 LRATO95237 230 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 GSNP06396 782 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 HPCAL1P37235 193 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 RPS6KA3P51812 740 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 CDH15P55291 814 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 NUP107P57740 925 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 FPGSQ05932 587 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 GTF2H3Q13889 308 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 BCL7AQ4VC05 210 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 PYCR3Q53H96 274 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 PAGE2BQ5JRK9 111 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 AP1ARQ63HQ0 302 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 CAPN13Q6MZZ7 669 aaPredicted RBP11.74□□□□□ -0.53
CLN8-212ENST00000637083 PSRC1Q6PGN9 363 aaPredicted RBP11.74□□□□□ -0.53
CLN8-212ENST00000637083 DOK6Q6PKX4 331 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 PARS2Q7L3T8 475 aaKnown RBP11.74□□□□□ -0.53
CLN8-212ENST00000637083 NLRP8Q86W28 1048 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 PJA1Q8NG27 643 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 NETO1Q8TDF5 533 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 SORCS1Q8WY21 1168 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 MYLIPQ8WY64 445 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 OR8D1Q8WZ84 308 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 DTD2Q96FN9 168 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 PPP1R16AQ96I34 528 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 CNDP2Q96KP4 475 aaKnown RBP11.74□□□□□ -0.53
CLN8-212ENST00000637083 INPP5KQ9BT40 448 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 REXO4Q9GZR2 422 aaKnown RBP11.74□□□□□ -0.53
CLN8-212ENST00000637083 BAG5Q9UL15 447 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 PTPRSQ13332 1948 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 DOCK6Q96HP0 2047 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 EDDM13A0A1B0GTR0 161 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 MAGEB17A8MXT2 336 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 E7EQ34 232 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 CLIC1O00299 241 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 PRAMEF4O60810 478 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 CYP17A1P05093 508 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 PTPN6P29350 595 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 CTSCP53634 463 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 IL18R1Q13478 541 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 HIST2H2ACQ16777 129 aaPredicted RBP11.74□□□□□ -0.53
CLN8-212ENST00000637083 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.74□□□□□ -0.53
CLN8-212ENST00000637083 PRAMEF9Q5VWM5 478 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 HIST2H2AA3Q6FI13 130 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 PDE12Q6L8Q7 609 aaKnown RBP11.74□□□□□ -0.53
CLN8-212ENST00000637083 MED27Q6P2C8 311 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 ANKRD46Q86W74 232 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 OFCC1Q8IZS5 231 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 CXorf40BQ96DE9 158 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 NRBF2Q96F24 287 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 COQ10AQ96MF6 247 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 MUS81Q96NY9 551 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 EFCAB11Q9BUY7 163 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 ASPSCR1Q9BZE9 553 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 AASDHPPTQ9NRN7 309 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 FAM8A1Q9UBU6 413 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 DYRK1BQ9Y463 629 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 HCFC2Q9Y5Z7 792 aa11.74□□□□□ -0.53
CLN8-212ENST00000637083 C17orf113A0A1B0GUU1 675 aa11.73□□□□□ -0.53
CLN8-212ENST00000637083 NOL3O60936 208 aaKnown RBP11.73□□□□□ -0.53
CLN8-212ENST00000637083 NFATC1O95644 943 aa11.73□□□□□ -0.53
CLN8-212ENST00000637083 CLIC3O95833 236 aa11.73□□□□□ -0.53
CLN8-212ENST00000637083 RB1P06400 928 aa11.73□□□□□ -0.53
CLN8-212ENST00000637083 EPCAMP16422 314 aa11.73□□□□□ -0.53
CLN8-212ENST00000637083 GPX2P18283 190 aa11.73□□□□□ -0.53
CLN8-212ENST00000637083 ITGB7P26010 798 aa11.73□□□□□ -0.53
CLN8-212ENST00000637083 IMPA1P29218 277 aa11.73□□□□□ -0.53
CLN8-212ENST00000637083 SLC5A2P31639 672 aa11.73□□□□□ -0.53
CLN8-212ENST00000637083 RPL3P39023 403 aaKnown RBP11.73□□□□□ -0.53
CLN8-212ENST00000637083 RXRGP48443 463 aa11.73□□□□□ -0.53
CLN8-212ENST00000637083 NTHL1P78549 312 aa11.73□□□□□ -0.53
CLN8-212ENST00000637083 PHEXP78562 749 aa11.73□□□□□ -0.53
CLN8-212ENST00000637083 PPP2R2BQ00005 443 aa11.73□□□□□ -0.53
CLN8-212ENST00000637083 LAPTM5Q13571 262 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms