RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 EIF2S1P05198 315 aaKnown RBP17.16■□□□□ 0.34
CLN6-212ENST00000636020 HEXAP06865 529 aa17.16■□□□□ 0.34
CLN6-212ENST00000636020 MC4RP32245 332 aa17.16■□□□□ 0.34
CLN6-212ENST00000636020 SLC26A3P40879 764 aa17.16■□□□□ 0.34
CLN6-212ENST00000636020 MYL5Q02045 173 aa17.16■□□□□ 0.34
CLN6-212ENST00000636020 GRB7Q14451 532 aa17.16■□□□□ 0.34
CLN6-212ENST00000636020 MEP1AQ16819 746 aa17.16■□□□□ 0.34
CLN6-212ENST00000636020 PRTGQ2VWP7 1150 aa17.16■□□□□ 0.34
CLN6-212ENST00000636020 BTBD16Q32M84 506 aa17.16■□□□□ 0.34
CLN6-212ENST00000636020 CRLF3Q8IUI8 442 aa17.16■□□□□ 0.34
CLN6-212ENST00000636020 MVB12AQ96EY5 273 aa17.16■□□□□ 0.34
CLN6-212ENST00000636020 OLFM1Q99784 485 aa17.16■□□□□ 0.34
CLN6-212ENST00000636020 GPATCH1Q9BRR8 931 aaKnown RBP17.16■□□□□ 0.34
CLN6-212ENST00000636020 CLEC4MQ9H2X3 399 aaPredicted RBP17.16■□□□□ 0.34
CLN6-212ENST00000636020 CIDEBQ9UHD4 219 aa17.16■□□□□ 0.34
CLN6-212ENST00000636020 GNPTGQ9UJJ9 305 aa17.16■□□□□ 0.34
CLN6-212ENST00000636020 IGHV3-20A0A0C4DH32 117 aa17.15■□□□□ 0.34
CLN6-212ENST00000636020 A0A1B0GTH9 108 aa17.15■□□□□ 0.34
CLN6-212ENST00000636020 PRPF4O43172 522 aaKnown RBP eCLIP17.15■□□□□ 0.343e-7■■■■□ 23.9
CLN6-212ENST00000636020 NRP2O60462 931 aa17.15■□□□□ 0.34
CLN6-212ENST00000636020 MAN1A2O60476 641 aa17.15■□□□□ 0.34
CLN6-212ENST00000636020 NEURL1O76050 574 aa17.15■□□□□ 0.34
CLN6-212ENST00000636020 C8orf89P0DMQ9 161 aa17.15■□□□□ 0.34
CLN6-212ENST00000636020 ADRA1AP35348 466 aa17.15■□□□□ 0.34
CLN6-212ENST00000636020 NR2C2P49116 596 aa17.15■□□□□ 0.34
CLN6-212ENST00000636020 EMP3P54852 163 aa17.15■□□□□ 0.34
CLN6-212ENST00000636020 DLX5P56178 289 aa17.15■□□□□ 0.34
CLN6-212ENST00000636020 PLOD1Q02809 727 aaPredicted RBP17.15■□□□□ 0.34
CLN6-212ENST00000636020 DBN1Q16643 649 aa17.15■□□□□ 0.34
CLN6-212ENST00000636020 DNAJC21Q5F1R6 531 aaKnown RBP17.15■□□□□ 0.34
CLN6-212ENST00000636020 RNF44Q7L0R7 432 aa17.15■□□□□ 0.34
CLN6-212ENST00000636020 BZW1Q7L1Q6 419 aaKnown RBP17.15■□□□□ 0.34
CLN6-212ENST00000636020 TAS2R42Q7RTR8 314 aa17.15■□□□□ 0.34
CLN6-212ENST00000636020 TMTC1Q8IUR5 882 aa17.15■□□□□ 0.34
CLN6-212ENST00000636020 RPRMLQ8N4K4 120 aa17.15■□□□□ 0.34
CLN6-212ENST00000636020 SEC16BQ96JE7 1060 aa17.15■□□□□ 0.34
CLN6-212ENST00000636020 VAT1Q99536 393 aa17.15■□□□□ 0.34
CLN6-212ENST00000636020 APOL2Q9BQE5 337 aa17.15■□□□□ 0.34
CLN6-212ENST00000636020 GORASP1Q9BQQ3 440 aa17.15■□□□□ 0.34
CLN6-212ENST00000636020 KCNK13Q9HB14 408 aa17.15■□□□□ 0.34
CLN6-212ENST00000636020 RTN4Q9NQC3 1192 aaKnown RBP17.15■□□□□ 0.34
CLN6-212ENST00000636020 RASSF1Q9NS23 344 aa17.15■□□□□ 0.34
CLN6-212ENST00000636020 SMARCAL1Q9NZC9 954 aa17.15■□□□□ 0.34
CLN6-212ENST00000636020 CTTNBP2NLQ9P2B4 639 aa17.15■□□□□ 0.34
CLN6-212ENST00000636020 A0A087X0T9 212 aa17.14■□□□□ 0.33
CLN6-212ENST00000636020 SUN1O94901 812 aa17.14■□□□□ 0.33
CLN6-212ENST00000636020 FTH1P02794 183 aa17.14■□□□□ 0.33
CLN6-212ENST00000636020 FAM228BP0C875 321 aa17.14■□□□□ 0.33
CLN6-212ENST00000636020 OC90Q02509 493 aaPredicted RBP17.14■□□□□ 0.33
CLN6-212ENST00000636020 SYTL3Q4VX76 610 aa17.14■□□□□ 0.33
CLN6-212ENST00000636020 ALKBH5Q6P6C2 394 aaKnown RBP17.14■□□□□ 0.33
CLN6-212ENST00000636020 CPEB2Q7Z5Q1 589 aaKnown RBP17.14■□□□□ 0.33
CLN6-212ENST00000636020 ZC3H7AQ8IWR0 971 aaKnown RBP17.14■□□□□ 0.33
CLN6-212ENST00000636020 PIANPQ8IYJ0 282 aa17.14■□□□□ 0.33
CLN6-212ENST00000636020 HORMAD2Q8N7B1 307 aa17.14■□□□□ 0.33
CLN6-212ENST00000636020 CABS1Q96KC9 395 aa17.14■□□□□ 0.33
CLN6-212ENST00000636020 TP63Q9H3D4 680 aaPredicted RBP17.14■□□□□ 0.33
CLN6-212ENST00000636020 CHMP5Q9NZZ3 219 aa17.14■□□□□ 0.33
CLN6-212ENST00000636020 RSPH14Q9UHP6 348 aa17.14■□□□□ 0.33
CLN6-212ENST00000636020 PHF3Q92576 2039 aaKnown RBP17.13■□□□□ 0.33
CLN6-212ENST00000636020 GABRR3A8MPY1 467 aa17.13■□□□□ 0.33
CLN6-212ENST00000636020 QSOX1O00391 747 aa17.13■□□□□ 0.33
CLN6-212ENST00000636020 ERVK-10P10266 1014 aa17.13■□□□□ 0.33
CLN6-212ENST00000636020 PECAM1P16284 738 aaPredicted RBP17.13■□□□□ 0.33
CLN6-212ENST00000636020 HOXC12P31275 282 aa17.13■□□□□ 0.33
CLN6-212ENST00000636020 GEMP55040 296 aa17.13■□□□□ 0.33
CLN6-212ENST00000636020 MAPKAPK3Q16644 382 aa17.13■□□□□ 0.33
CLN6-212ENST00000636020 SYT16Q17RD7 645 aa17.13■□□□□ 0.33
CLN6-212ENST00000636020 FBXO42Q6P3S6 717 aa17.13■□□□□ 0.33
CLN6-212ENST00000636020 ZZZ3Q8IYH5 903 aa17.13■□□□□ 0.33
CLN6-212ENST00000636020 CPSF7Q8N684 471 aaKnown RBP17.13■□□□□ 0.33
CLN6-212ENST00000636020 ACRBPQ8NEB7 543 aa17.13■□□□□ 0.33
CLN6-212ENST00000636020 MYRIPQ8NFW9 859 aa17.13■□□□□ 0.33
CLN6-212ENST00000636020 METTL21AQ8WXB1 218 aa17.13■□□□□ 0.33
CLN6-212ENST00000636020 MMABQ96EY8 250 aaPredicted RBP17.13■□□□□ 0.33
CLN6-212ENST00000636020 DNAJC1Q96KC8 554 aaKnown RBP17.13■□□□□ 0.33
CLN6-212ENST00000636020 UVRAGQ9P2Y5 699 aa17.13■□□□□ 0.33
CLN6-212ENST00000636020 TRHDEQ9UKU6 1024 aa17.13■□□□□ 0.33
CLN6-212ENST00000636020 BZW2Q9Y6E2 419 aaKnown RBP17.13■□□□□ 0.33
CLN6-212ENST00000636020 DNAJC13O75165 2243 aa17.12■□□□□ 0.33
CLN6-212ENST00000636020 USP27XA6NNY8 438 aa17.12■□□□□ 0.33
CLN6-212ENST00000636020 H7C0S8 307 aa17.12■□□□□ 0.33
CLN6-212ENST00000636020 NME2P1O60361 137 aa17.12■□□□□ 0.33
CLN6-212ENST00000636020 ANXA9O76027 345 aa17.12■□□□□ 0.33
CLN6-212ENST00000636020 NME2P22392 152 aa17.12■□□□□ 0.33
CLN6-212ENST00000636020 PMPCAQ10713 525 aa17.12■□□□□ 0.33
CLN6-212ENST00000636020 LANCL3Q6ZV70 420 aa17.12■□□□□ 0.33
CLN6-212ENST00000636020 CDC20BQ86Y33 519 aa17.12■□□□□ 0.33
CLN6-212ENST00000636020 DCUN1D3Q8IWE4 304 aa17.12■□□□□ 0.33
CLN6-212ENST00000636020 SLC22A15Q8IZD6 547 aa17.12■□□□□ 0.33
CLN6-212ENST00000636020 LRRN4CLQ8ND94 238 aa17.12■□□□□ 0.33
CLN6-212ENST00000636020 RNF25Q96BH1 459 aaPredicted RBP17.12■□□□□ 0.33
CLN6-212ENST00000636020 CYTH2Q99418 400 aa17.12■□□□□ 0.33
CLN6-212ENST00000636020 MIPEPQ99797 713 aa17.12■□□□□ 0.33
CLN6-212ENST00000636020 VN1R1Q9GZP7 353 aa17.12■□□□□ 0.33
CLN6-212ENST00000636020 LCMT1Q9UIC8 334 aa17.12■□□□□ 0.33
CLN6-212ENST00000636020 H0YGG7 62 aa17.11■□□□□ 0.33
CLN6-212ENST00000636020 FOXS1O43638 330 aa17.11■□□□□ 0.33
CLN6-212ENST00000636020 ANXA5P08758 320 aa17.11■□□□□ 0.33
CLN6-212ENST00000636020 PSMB5P28074 263 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms