RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 METRNLQ641Q3 311 aa21.32■■□□□ 1
PNKP-220ENST00000627232 KIAA1161Q6NSJ0 714 aa21.32■■□□□ 1
PNKP-220ENST00000627232 GPR180Q86V85 440 aa21.32■■□□□ 1
PNKP-220ENST00000627232 CACUL1Q86Y37 369 aa21.32■■□□□ 1
PNKP-220ENST00000627232 SYT12Q8IV01 421 aa21.32■■□□□ 1
PNKP-220ENST00000627232 RNF175Q8N4F7 328 aa21.32■■□□□ 1
PNKP-220ENST00000627232 MARVELD2Q8N4S9 558 aa21.32■■□□□ 1
PNKP-220ENST00000627232 TP53I13Q8NBR0 393 aaPredicted RBP21.32■■□□□ 1
PNKP-220ENST00000627232 LGR4Q9BXB1 951 aa21.32■■□□□ 1
PNKP-220ENST00000627232 C1QTNF2Q9BXJ5 285 aa21.32■■□□□ 1
PNKP-220ENST00000627232 SEMA6AQ9H2E6 1030 aa21.32■■□□□ 1
PNKP-220ENST00000627232 WDR26Q9H7D7 661 aa21.32■■□□□ 1
PNKP-220ENST00000627232 PHPT1Q9NRX4 125 aaPredicted RBP21.32■■□□□ 1
PNKP-220ENST00000627232 AGPAT4Q9NRZ5 378 aa21.32■■□□□ 1
PNKP-220ENST00000627232 SIRT5Q9NXA8 310 aa21.32■■□□□ 1
PNKP-220ENST00000627232 SLC25A37Q9NYZ2 338 aa21.32■■□□□ 1
PNKP-220ENST00000627232 LMCD1Q9NZU5 365 aa21.32■■□□□ 1
PNKP-220ENST00000627232 ZFR2Q9UPR6 939 aaKnown RBP21.32■■□□□ 1
PNKP-220ENST00000627232 ASF1AQ9Y294 204 aa21.32■■□□□ 1
PNKP-220ENST00000627232 TSC22D4Q9Y3Q8 395 aa21.32■■□□□ 1
PNKP-220ENST00000627232 MAGEB17A8MXT2 336 aa21.31■■□□□ 1
PNKP-220ENST00000627232 FOXE1O00358 373 aaPredicted RBP21.31■■□□□ 1
PNKP-220ENST00000627232 PLRG1O43660 514 aaKnown RBP21.31■■□□□ 1
PNKP-220ENST00000627232 GMNNO75496 209 aa21.31■■□□□ 1
PNKP-220ENST00000627232 LYNP07948 512 aa21.31■■□□□ 1
PNKP-220ENST00000627232 PCNAP12004 261 aa21.31■■□□□ 1
PNKP-220ENST00000627232 HOXB9P17482 250 aaPredicted RBP21.31■■□□□ 1
PNKP-220ENST00000627232 HSD17B2P37059 387 aa21.31■■□□□ 1
PNKP-220ENST00000627232 ASMTP46597 345 aa21.31■■□□□ 1
PNKP-220ENST00000627232 PLIN5Q00G26 463 aa21.31■■□□□ 1
PNKP-220ENST00000627232 DDX39BQ13838 428 aaKnown RBP21.31■■□□□ 1
PNKP-220ENST00000627232 ARHGAP19Q14CB8 494 aa21.31■■□□□ 1
PNKP-220ENST00000627232 HIST2H2ACQ16777 129 aaPredicted RBP21.31■■□□□ 1
PNKP-220ENST00000627232 HIST2H2AA3Q6FI13 130 aa21.31■■□□□ 1
PNKP-220ENST00000627232 LCTLQ6UWM7 567 aa21.31■■□□□ 1
PNKP-220ENST00000627232 AMIGO2Q86SJ2 522 aa21.31■■□□□ 1
PNKP-220ENST00000627232 APLFQ8IW19 511 aaPredicted RBP21.31■■□□□ 1
PNKP-220ENST00000627232 TBC1D21Q8IYX1 336 aa21.31■■□□□ 1
PNKP-220ENST00000627232 TMEM132CQ8N3T6 1108 aa21.31■■□□□ 1
PNKP-220ENST00000627232 HUS1BQ8NHY5 278 aa21.31■■□□□ 1
PNKP-220ENST00000627232 CHTF18Q8WVB6 975 aa21.31■■□□□ 1
PNKP-220ENST00000627232 SLC5A11Q8WWX8 675 aa21.31■■□□□ 1
PNKP-220ENST00000627232 BIRC7Q96CA5 298 aa21.31■■□□□ 1
PNKP-220ENST00000627232 NECTIN4Q96NY8 510 aa21.31■■□□□ 1
PNKP-220ENST00000627232 THUMPD3Q9BV44 507 aaKnown RBP21.31■■□□□ 1
PNKP-220ENST00000627232 RPF2Q9H7B2 306 aaKnown RBP21.31■■□□□ 1
PNKP-220ENST00000627232 COQ10BQ9H8M1 238 aa21.31■■□□□ 1
PNKP-220ENST00000627232 MBNL1Q9NR56 388 aaKnown RBP21.31■■□□□ 1
PNKP-220ENST00000627232 SLC23A2Q9UGH3 650 aa21.31■■□□□ 1
PNKP-220ENST00000627232 USP22Q9UPT9 525 aa21.31■■□□□ 1
PNKP-220ENST00000627232 PRKAB1Q9Y478 270 aa21.31■■□□□ 1
PNKP-220ENST00000627232 PCM1Q15154 2024 aa21.31■■□□□ 1
PNKP-220ENST00000627232 TRANK1O15050 2925 aa21.31■■□□□ 1
PNKP-220ENST00000627232 ANXA6P08133 673 aa21.3■■□□□ 1
PNKP-220ENST00000627232 ERGP11308 486 aa21.3■■□□□ 1
PNKP-220ENST00000627232 OXTRP30559 389 aa21.3■■□□□ 1
PNKP-220ENST00000627232 KIR3DL1P43629 444 aa21.3■■□□□ 1
PNKP-220ENST00000627232 TRPC1P48995 793 aa21.3■■□□□ 1
PNKP-220ENST00000627232 POLE2P56282 527 aa21.3■■□□□ 1
PNKP-220ENST00000627232 DMPKQ09013 629 aa21.3■■□□□ 1
PNKP-220ENST00000627232 PGS1Q32NB8 556 aa21.3■■□□□ 1
PNKP-220ENST00000627232 TMEM196Q5HYL7 178 aa21.3■■□□□ 1
PNKP-220ENST00000627232 NXPE4Q6UWF7 544 aa21.3■■□□□ 1
PNKP-220ENST00000627232 PACRGLQ8N7B6 248 aa21.3■■□□□ 1
PNKP-220ENST00000627232 OR2T12Q8NG77 320 aa21.3■■□□□ 1
PNKP-220ENST00000627232 TFGQ92734 400 aaPredicted RBP21.3■■□□□ 1
PNKP-220ENST00000627232 NELL1Q92832 810 aa21.3■■□□□ 1
PNKP-220ENST00000627232 EGLN2Q96KS0 407 aa21.3■■□□□ 1
PNKP-220ENST00000627232 ZNF597Q96LX8 424 aa21.3■■□□□ 1
PNKP-220ENST00000627232 CPPED1Q9BRF8 314 aaPredicted RBP21.3■■□□□ 1
PNKP-220ENST00000627232 HAUS8Q9BT25 410 aa21.3■■□□□ 1
PNKP-220ENST00000627232 GORASP2Q9H8Y8 452 aa21.3■■□□□ 1
PNKP-220ENST00000627232 C8orf4Q9NR00 106 aa21.3■■□□□ 1
PNKP-220ENST00000627232 FBXL12Q9NXK8 326 aa21.3■■□□□ 1
PNKP-220ENST00000627232 PCDHB14Q9Y5E9 798 aa21.3■■□□□ 1
PNKP-220ENST00000627232 AP4B1Q9Y6B7 739 aa21.3■■□□□ 1
PNKP-220ENST00000627232 COL4A2P08572 1712 aa21.3■■□□□ 1
PNKP-220ENST00000627232 TXNDC9O14530 226 aa21.29■■□□□ 1
PNKP-220ENST00000627232 UBTFL6P0CB48 400 aaPredicted RBP21.29■■□□□ 1
PNKP-220ENST00000627232 CLCN2P51788 898 aa21.29■■□□□ 1
PNKP-220ENST00000627232 SGCGQ13326 291 aa21.29■■□□□ 1
PNKP-220ENST00000627232 FGL2Q14314 439 aa21.29■■□□□ 1
PNKP-220ENST00000627232 SLBPQ14493 270 aaKnown RBP eCLIP21.29■■□□□ 1
PNKP-220ENST00000627232 PDK3Q15120 406 aa21.29■■□□□ 1
PNKP-220ENST00000627232 INTS11Q5TA45 600 aaKnown RBP21.29■■□□□ 1
PNKP-220ENST00000627232 PPP4R4Q6NUP7 873 aa21.29■■□□□ 1
PNKP-220ENST00000627232 KIAA1211LQ6NV74 962 aa21.29■■□□□ 1
PNKP-220ENST00000627232 GALNT4Q8N4A0 578 aa21.29■■□□□ 1
PNKP-220ENST00000627232 DTWD1Q8N5C7 304 aa21.29■■□□□ 1
PNKP-220ENST00000627232 ZNF548Q8NEK5 533 aaPredicted RBP21.29■■□□□ 1
PNKP-220ENST00000627232 SPDYE1Q8NFV5 336 aaPredicted RBP21.29■■□□□ 1
PNKP-220ENST00000627232 OR8J2Q8NGG1 315 aa21.29■■□□□ 1
PNKP-220ENST00000627232 OR52E4Q8NGH9 312 aa21.29■■□□□ 1
PNKP-220ENST00000627232 UBE2E3Q969T4 207 aa21.29■■□□□ 1
PNKP-220ENST00000627232 CENPNQ96H22 339 aaPredicted RBP21.29■■□□□ 1
PNKP-220ENST00000627232 MSLNLQ96KJ4 702 aa21.29■■□□□ 1
PNKP-220ENST00000627232 GBP5Q96PP8 586 aa21.29■■□□□ 1
PNKP-220ENST00000627232 C1QTNF7Q9BXJ2 289 aa21.29■■□□□ 1
PNKP-220ENST00000627232 EBPLQ9BY08 206 aa21.29■■□□□ 1
PNKP-220ENST00000627232 PIF1Q9H611 641 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms