RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 PAQR7Q86WK9 346 aa21.39■■□□□ 1.01
SF1-220ENST00000626028 GPATCH11Q8N954 259 aa21.39■■□□□ 1.01
SF1-220ENST00000626028 TMEM102Q8N9M5 508 aaPredicted RBP21.39■■□□□ 1.01
SF1-220ENST00000626028 OR2Y1Q8NGV0 311 aa21.39■■□□□ 1.01
SF1-220ENST00000626028 LINGO1Q96FE5 620 aa21.39■■□□□ 1.01
SF1-220ENST00000626028 ABHD17AQ96GS6 310 aa21.39■■□□□ 1.01
SF1-220ENST00000626028 HIST1H2AHQ96KK5 128 aa21.39■■□□□ 1.01
SF1-220ENST00000626028 HIST1H2AJQ99878 128 aa21.39■■□□□ 1.01
SF1-220ENST00000626028 H2AFJQ9BTM1 129 aa21.39■■□□□ 1.01
SF1-220ENST00000626028 ACAT2Q9BWD1 397 aa21.39■■□□□ 1.01
SF1-220ENST00000626028 SLC26A1Q9H2B4 701 aa21.39■■□□□ 1.01
SF1-220ENST00000626028 DPH5Q9H2P9 285 aa21.39■■□□□ 1.01
SF1-220ENST00000626028 CCDC177Q9NQR7 707 aaPredicted RBP21.39■■□□□ 1.01
SF1-220ENST00000626028 STOX2Q9P2F5 926 aaPredicted RBP21.39■■□□□ 1.01
SF1-220ENST00000626028 PDE10AQ9Y233 779 aa21.39■■□□□ 1.01
SF1-220ENST00000626028 IGKV1-8A0A0C4DH67 115 aa21.38■■□□□ 1.01
SF1-220ENST00000626028 PABPN1LA6NDY0 278 aaKnown RBP21.38■■□□□ 1.01
SF1-220ENST00000626028 ALAS2P22557 587 aa21.38■■□□□ 1.01
SF1-220ENST00000626028 RRADP55042 308 aa21.38■■□□□ 1.01
SF1-220ENST00000626028 WASHC2DQ5SRD0 308 aa21.38■■□□□ 1.01
SF1-220ENST00000626028 C1orf189Q5VU69 101 aa21.38■■□□□ 1.01
SF1-220ENST00000626028 PRMT9Q6P2P2 845 aa21.38■■□□□ 1.01
SF1-220ENST00000626028 FBXO42Q6P3S6 717 aa21.38■■□□□ 1.01
SF1-220ENST00000626028 TTLL10Q6ZVT0 673 aa21.38■■□□□ 1.01
SF1-220ENST00000626028 STRA8Q7Z7C7 330 aa21.38■■□□□ 1.01
SF1-220ENST00000626028 CDKL2Q92772 493 aa21.38■■□□□ 1.01
SF1-220ENST00000626028 PTERQ96BW5 349 aa21.38■■□□□ 1.01
SF1-220ENST00000626028 MVB12AQ96EY5 273 aa21.38■■□□□ 1.01
SF1-220ENST00000626028 VPS39Q96JC1 886 aa21.38■■□□□ 1.01
SF1-220ENST00000626028 RHOJQ9H4E5 214 aa21.38■■□□□ 1.01
SF1-220ENST00000626028 POPDC3Q9HBV1 291 aa21.38■■□□□ 1.01
SF1-220ENST00000626028 NXT1Q9UKK6 140 aaKnown RBP21.38■■□□□ 1.01
SF1-220ENST00000626028 HYKKA2RU49 373 aa21.37■■□□□ 1.01
SF1-220ENST00000626028 PLA2G2AP14555 144 aa21.37■■□□□ 1.01
SF1-220ENST00000626028 FOLR3P41439 243 aa21.37■■□□□ 1.01
SF1-220ENST00000626028 VSX2P58304 361 aaPredicted RBP21.37■■□□□ 1.01
SF1-220ENST00000626028 MUM1Q2TAK8 710 aa21.37■■□□□ 1.01
SF1-220ENST00000626028 LACTB2Q53H82 288 aaPredicted RBP21.37■■□□□ 1.01
SF1-220ENST00000626028 THEMIS2Q5TEJ8 643 aa21.37■■□□□ 1.01
SF1-220ENST00000626028 GARNL3Q5VVW2 1013 aa21.37■■□□□ 1.01
SF1-220ENST00000626028 MLIPQ5VWP3 458 aa21.37■■□□□ 1.01
SF1-220ENST00000626028 OVCH1Q7RTY7 1134 aa21.37■■□□□ 1.01
SF1-220ENST00000626028 ATL1Q8WXF7 558 aa21.37■■□□□ 1.01
SF1-220ENST00000626028 MCMBPQ9BTE3 642 aa21.37■■□□□ 1.01
SF1-220ENST00000626028 FAM129AQ9BZQ8 928 aa21.37■■□□□ 1.01
SF1-220ENST00000626028 SAYSD1Q9NPB0 183 aa21.37■■□□□ 1.01
SF1-220ENST00000626028 TMEM184CQ9NVA4 438 aa21.37■■□□□ 1.01
SF1-220ENST00000626028 SLC17A6Q9P2U8 582 aa21.37■■□□□ 1.01
SF1-220ENST00000626028 ADAMTS6Q9UKP5 1117 aa21.37■■□□□ 1.01
SF1-220ENST00000626028 NOVA2Q9UNW9 492 aaKnown RBP21.37■■□□□ 1.01
SF1-220ENST00000626028 PCDHGA9Q9Y5G4 932 aaKnown RBP21.37■■□□□ 1.01
SF1-220ENST00000626028 PSAT1Q9Y617 370 aa21.37■■□□□ 1.01
SF1-220ENST00000626028 A0A0J9YVX5 310 aa21.36■■□□□ 1.01
SF1-220ENST00000626028 ZNF37AP17032 561 aaPredicted RBP21.36■■□□□ 1.01
SF1-220ENST00000626028 TBPL1P62380 186 aa21.36■■□□□ 1.01
SF1-220ENST00000626028 TSTA3Q13630 321 aaPredicted RBP21.36■■□□□ 1.01
SF1-220ENST00000626028 WHAMMP3Q1A5X7 153 aa21.36■■□□□ 1.01
SF1-220ENST00000626028 PRTGQ2VWP7 1150 aa21.36■■□□□ 1.01
SF1-220ENST00000626028 FRMPD2BQ6IN97 320 aa21.36■■□□□ 1.01
SF1-220ENST00000626028 NKAPQ8N5F7 415 aaKnown RBP21.36■■□□□ 1.01
SF1-220ENST00000626028 PPFIBP2Q8ND30 876 aa21.36■■□□□ 1.01
SF1-220ENST00000626028 RERGQ96A58 199 aaPredicted RBP21.36■■□□□ 1.01
SF1-220ENST00000626028 C16orf45Q96MC5 204 aaPredicted RBP21.36■■□□□ 1.01
SF1-220ENST00000626028 OLFM1Q99784 485 aa21.36■■□□□ 1.01
SF1-220ENST00000626028 ING2Q9H160 280 aa21.36■■□□□ 1.01
SF1-220ENST00000626028 ANAPC2Q9UJX6 822 aa21.36■■□□□ 1.01
SF1-220ENST00000626028 PCDHGB7Q9Y5F8 929 aa21.36■■□□□ 1.01
SF1-220ENST00000626028 H0YGG7 62 aa21.35■■□□□ 1.01
SF1-220ENST00000626028 KIF2AO00139 706 aaPredicted RBP21.35■■□□□ 1.01
SF1-220ENST00000626028 SUV39H1O43463 412 aa21.35■■□□□ 1.01
SF1-220ENST00000626028 ARF3P61204 181 aaPredicted RBP21.35■■□□□ 1.01
SF1-220ENST00000626028 MRPS25P82663 173 aaKnown RBP21.35■■□□□ 1.01
SF1-220ENST00000626028 NFKB2Q00653 900 aa21.35■■□□□ 1.01
SF1-220ENST00000626028 PRAMEF13Q5VWM6 474 aa21.35■■□□□ 1.01
SF1-220ENST00000626028 AGTRAPQ6RW13 159 aa21.35■■□□□ 1.01
SF1-220ENST00000626028 ATG14Q6ZNE5 492 aa21.35■■□□□ 1.01
SF1-220ENST00000626028 THAP11Q96EK4 314 aa21.35■■□□□ 1.01
SF1-220ENST00000626028 OR2A5Q96R48 311 aa21.35■■□□□ 1.01
SF1-220ENST00000626028 HAUS8Q9BT25 410 aa21.35■■□□□ 1.01
SF1-220ENST00000626028 SGPP1Q9BX95 441 aa21.35■■□□□ 1.01
SF1-220ENST00000626028 ACSS2Q9NR19 701 aa21.35■■□□□ 1.01
SF1-220ENST00000626028 SLC22A11Q9NSA0 550 aa21.35■■□□□ 1.01
SF1-220ENST00000626028 TXNDC16Q9P2K2 825 aa21.35■■□□□ 1.01
SF1-220ENST00000626028 TLK1Q9UKI8 766 aa21.35■■□□□ 1.01
SF1-220ENST00000626028 G3BP2Q9UN86 482 aaKnown RBP21.35■■□□□ 1.01
SF1-220ENST00000626028 CDC14AQ9UNH5 594 aa21.35■■□□□ 1.01
SF1-220ENST00000626028 PTRH2Q9Y3E5 179 aaKnown RBP21.35■■□□□ 1.01
SF1-220ENST00000626028 KCNE1BA0A087WTH5 132 aa21.34■■□□□ 1.01
SF1-220ENST00000626028 LOC105369274A0A096LPK9 316 aa21.34■■□□□ 1.01
SF1-220ENST00000626028 LOC102723532A0A0G2JNH3 316 aa21.34■■□□□ 1.01
SF1-220ENST00000626028 FAM95CA0A1B0GW59 222 aa21.34■■□□□ 1.01
SF1-220ENST00000626028 PRPF4O43172 522 aaKnown RBP eCLIP21.34■■□□□ 1.01
SF1-220ENST00000626028 PLTPP55058 493 aa21.34■■□□□ 1.01
SF1-220ENST00000626028 YBX1P67809 324 aaKnown RBP21.34■■□□□ 1.01
SF1-220ENST00000626028 POU4F1Q01851 419 aa21.34■■□□□ 1.01
SF1-220ENST00000626028 PHKG1Q16816 387 aa21.34■■□□□ 1.01
SF1-220ENST00000626028 C8orf74Q6P047 294 aa21.34■■□□□ 1.01
SF1-220ENST00000626028 LCTLQ6UWM7 567 aa21.34■■□□□ 1.01
SF1-220ENST00000626028 C3orf62Q6ZUJ4 267 aa21.34■■□□□ 1.01
SF1-220ENST00000626028 OR4N4Q8N0Y3 316 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms