RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 MPP5Q8N3R9 675 aa18.06■□□□□ 0.48
SMN1-211ENST00000625245 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.06■□□□□ 0.48
SMN1-211ENST00000625245 MRPS30Q9NP92 439 aaKnown RBP18.06■□□□□ 0.48
SMN1-211ENST00000625245 TREX1Q9NSU2 369 aa18.06■□□□□ 0.48
SMN1-211ENST00000625245 BFARQ9NZS9 450 aa18.06■□□□□ 0.48
SMN1-211ENST00000625245 SPATA7Q9P0W8 599 aa18.06■□□□□ 0.48
SMN1-211ENST00000625245 ENTPD4Q9Y227 616 aa18.06■□□□□ 0.48
SMN1-211ENST00000625245 LRBAP50851 2863 aa18.05■□□□□ 0.48
SMN1-211ENST00000625245 OR2A25A4D2G3 310 aa18.05■□□□□ 0.48
SMN1-211ENST00000625245 IDSB3KWA1 339 aa18.05■□□□□ 0.48
SMN1-211ENST00000625245 GOLGA8KD6RF30 607 aa18.05■□□□□ 0.48
SMN1-211ENST00000625245 GOLGA8TH3BQL2 631 aa18.05■□□□□ 0.48
SMN1-211ENST00000625245 NIPSNAP2O75323 286 aa18.05■□□□□ 0.48
SMN1-211ENST00000625245 VPS26AO75436 327 aa18.05■□□□□ 0.48
SMN1-211ENST00000625245 WFS1O76024 890 aa18.05■□□□□ 0.48
SMN1-211ENST00000625245 VAPBO95292 243 aa18.05■□□□□ 0.48
SMN1-211ENST00000625245 HEXBP07686 556 aa18.05■□□□□ 0.48
SMN1-211ENST00000625245 RPA3P35244 121 aaPredicted RBP18.05■□□□□ 0.48
SMN1-211ENST00000625245 NAA25Q14CX7 972 aa18.05■□□□□ 0.48
SMN1-211ENST00000625245 PRTGQ2VWP7 1150 aa18.05■□□□□ 0.48
SMN1-211ENST00000625245 CES3Q6UWW8 571 aa18.05■□□□□ 0.48
SMN1-211ENST00000625245 SDCCAG8Q86SQ7 713 aaPredicted RBP18.05■□□□□ 0.48
SMN1-211ENST00000625245 OR9A1PQ8NGU1 263 aa18.05■□□□□ 0.48
SMN1-211ENST00000625245 PSMF1Q92530 271 aa18.05■□□□□ 0.48
SMN1-211ENST00000625245 MMABQ96EY8 250 aaPredicted RBP18.05■□□□□ 0.48
SMN1-211ENST00000625245 COPG2Q9UBF2 871 aa18.05■□□□□ 0.48
SMN1-211ENST00000625245 RUVBL1Q9Y265 456 aaKnown RBP18.05■□□□□ 0.48
SMN1-211ENST00000625245 IGLV3-12A0A075B6K2 115 aa18.04■□□□□ 0.48
SMN1-211ENST00000625245 TRAV17A0A0B4J275 112 aa18.04■□□□□ 0.48
SMN1-211ENST00000625245 PRPF4O43172 522 aaKnown RBP eCLIP18.04■□□□□ 0.48
SMN1-211ENST00000625245 SERPINA7P05543 415 aa18.04■□□□□ 0.48
SMN1-211ENST00000625245 CELA2AP08217 269 aa18.04■□□□□ 0.48
SMN1-211ENST00000625245 ANXA5P08758 320 aa18.04■□□□□ 0.48
SMN1-211ENST00000625245 PRF1P14222 555 aa18.04■□□□□ 0.48
SMN1-211ENST00000625245 CHRM3P20309 590 aa18.04■□□□□ 0.48
SMN1-211ENST00000625245 FDXRP22570 491 aa18.04■□□□□ 0.48
SMN1-211ENST00000625245 MGAT1P26572 445 aa18.04■□□□□ 0.48
SMN1-211ENST00000625245 SOX11P35716 441 aa18.04■□□□□ 0.48
SMN1-211ENST00000625245 NPY2RP49146 381 aa18.04■□□□□ 0.48
SMN1-211ENST00000625245 TNFSF10P50591 281 aa18.04■□□□□ 0.48
SMN1-211ENST00000625245 BASP1P80723 227 aaKnown RBP18.04■□□□□ 0.48
SMN1-211ENST00000625245 DSG2Q14126 1118 aa18.04■□□□□ 0.48
SMN1-211ENST00000625245 ANKRD20A4Q4UJ75 823 aa18.04■□□□□ 0.48
SMN1-211ENST00000625245 MRNIPQ6NTE8 343 aa18.04■□□□□ 0.48
SMN1-211ENST00000625245 GFRALQ6UXV0 394 aa18.04■□□□□ 0.48
SMN1-211ENST00000625245 CSNK1A1LQ8N752 337 aa18.04■□□□□ 0.48
SMN1-211ENST00000625245 SMPDL3AQ92484 453 aa18.04■□□□□ 0.48
SMN1-211ENST00000625245 BIRC8Q96P09 236 aa18.04■□□□□ 0.48
SMN1-211ENST00000625245 TAAR6Q96RI8 345 aa18.04■□□□□ 0.48
SMN1-211ENST00000625245 PLCD4Q9BRC7 762 aa18.04■□□□□ 0.48
SMN1-211ENST00000625245 TRIM56Q9BRZ2 755 aaKnown RBP18.04■□□□□ 0.48
SMN1-211ENST00000625245 IL22Q9GZX6 179 aa18.04■□□□□ 0.48
SMN1-211ENST00000625245 ABCF3Q9NUQ8 709 aa18.04■□□□□ 0.48
SMN1-211ENST00000625245 CRYL1Q9Y2S2 319 aa18.04■□□□□ 0.48
SMN1-211ENST00000625245 PCDH17O14917 1159 aa18.03■□□□□ 0.48
SMN1-211ENST00000625245 BMP10O95393 424 aa18.03■□□□□ 0.48
SMN1-211ENST00000625245 MATN4O95460 622 aa18.03■□□□□ 0.48
SMN1-211ENST00000625245 EMP3P54852 163 aa18.03■□□□□ 0.48
SMN1-211ENST00000625245 SRSF11Q05519 484 aaKnown RBP18.03■□□□□ 0.48
SMN1-211ENST00000625245 HKDC1Q2TB90 917 aa18.03■□□□□ 0.48
SMN1-211ENST00000625245 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.03■□□□□ 0.48
SMN1-211ENST00000625245 ZNF324BQ6AW86 544 aaPredicted RBP18.03■□□□□ 0.48
SMN1-211ENST00000625245 LRRC8BQ6P9F7 803 aa18.03■□□□□ 0.48
SMN1-211ENST00000625245 PAQR7Q86WK9 346 aa18.03■□□□□ 0.48
SMN1-211ENST00000625245 TMEM139Q8IV31 216 aa18.03■□□□□ 0.48
SMN1-211ENST00000625245 RNF10Q8N5U6 811 aaKnown RBP18.03■□□□□ 0.48
SMN1-211ENST00000625245 NR4A3Q92570 626 aa18.03■□□□□ 0.48
SMN1-211ENST00000625245 HAS2Q92819 552 aa18.03■□□□□ 0.48
SMN1-211ENST00000625245 MFSD3Q96ES6 412 aa18.03■□□□□ 0.48
SMN1-211ENST00000625245 UNKQ9C0B0 810 aaKnown RBP18.03■□□□□ 0.48
SMN1-211ENST00000625245 EIF2B3Q9NR50 452 aaKnown RBP18.03■□□□□ 0.48
SMN1-211ENST00000625245 GALPQ9UBC7 116 aa18.03■□□□□ 0.48
SMN1-211ENST00000625245 MRPS2Q9Y399 296 aaKnown RBP18.03■□□□□ 0.48
SMN1-211ENST00000625245 ABCA12Q86UK0 2595 aa18.03■□□□□ 0.48
SMN1-211ENST00000625245 IGHV1-45A0A0A0MS14 117 aa18.02■□□□□ 0.48
SMN1-211ENST00000625245 ARHGEF33A8MVX0 844 aa18.02■□□□□ 0.48
SMN1-211ENST00000625245 H3BMM5 538 aa18.02■□□□□ 0.48
SMN1-211ENST00000625245 PFDN6O15212 129 aa18.02■□□□□ 0.48
SMN1-211ENST00000625245 TDGF1P3P51864 188 aa18.02■□□□□ 0.48
SMN1-211ENST00000625245 ACSBG2Q5FVE4 666 aa18.02■□□□□ 0.48
SMN1-211ENST00000625245 GSTA5Q7RTV2 222 aa18.02■□□□□ 0.48
SMN1-211ENST00000625245 CPAMD8Q8IZJ3 1885 aa18.02■□□□□ 0.48
SMN1-211ENST00000625245 LPGAT1Q92604 370 aa18.02■□□□□ 0.48
SMN1-211ENST00000625245 RERGQ96A58 199 aaPredicted RBP18.02■□□□□ 0.48
SMN1-211ENST00000625245 MVB12AQ96EY5 273 aa18.02■□□□□ 0.48
SMN1-211ENST00000625245 PKP4Q99569 1192 aa18.02■□□□□ 0.48
SMN1-211ENST00000625245 RBSNQ9H1K0 784 aa18.02■□□□□ 0.48
SMN1-211ENST00000625245 SYNPO2LQ9H987 977 aa18.02■□□□□ 0.48
SMN1-211ENST00000625245 MKKSQ9NPJ1 570 aaPredicted RBP18.02■□□□□ 0.48
SMN1-211ENST00000625245 C14orf105Q9NVL8 296 aa18.02■□□□□ 0.48
SMN1-211ENST00000625245 RIC8BQ9NVN3 520 aa18.02■□□□□ 0.48
SMN1-211ENST00000625245 SYBUQ9NX95 663 aa18.02■□□□□ 0.48
SMN1-211ENST00000625245 UTP6Q9NYH9 597 aaKnown RBP18.02■□□□□ 0.48
SMN1-211ENST00000625245 TAC3Q9UHF0 121 aa18.02■□□□□ 0.48
SMN1-211ENST00000625245 DRG1Q9Y295 367 aaKnown RBP18.02■□□□□ 0.48
SMN1-211ENST00000625245 SCN2AQ99250 2005 aa18.01■□□□□ 0.47
SMN1-211ENST00000625245 A0A0A6YYC8 382 aaPredicted RBP18.01■□□□□ 0.47
SMN1-211ENST00000625245 TRGV8A0A0C4DH27 118 aa18.01■□□□□ 0.47
SMN1-211ENST00000625245 E5RI56 91 aa18.01■□□□□ 0.47
SMN1-211ENST00000625245 I3L1I5 382 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms