RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 TEX37Q96LM6 180 aa9.98□□□□□ -0.81
ATRX-216ENST00000624403 FRG2BQ96QU4 278 aa9.98□□□□□ -0.81
ATRX-216ENST00000624403 MENTQ9BUN1 341 aa9.98□□□□□ -0.81
ATRX-216ENST00000624403 MRPL1Q9BYD6 325 aaKnown RBP9.98□□□□□ -0.81
ATRX-216ENST00000624403 DENND2DQ9H6A0 471 aaPredicted RBP9.98□□□□□ -0.81
ATRX-216ENST00000624403 TBC1D17Q9HA65 648 aa9.98□□□□□ -0.81
ATRX-216ENST00000624403 PRDM8Q9NQV8 689 aa9.98□□□□□ -0.81
ATRX-216ENST00000624403 IMP3Q9NV31 184 aaKnown RBP9.98□□□□□ -0.81
ATRX-216ENST00000624403 C1orf109Q9NX04 203 aa9.98□□□□□ -0.81
ATRX-216ENST00000624403 NOP53Q9NZM5 478 aaKnown RBP9.98□□□□□ -0.81
ATRX-216ENST00000624403 ZIM2Q9NZV7 527 aa9.98□□□□□ -0.81
ATRX-216ENST00000624403 PNMA8BQ9ULN7 279 aaPredicted RBP9.98□□□□□ -0.81
ATRX-216ENST00000624403 DMTF1Q9Y222 760 aa9.98□□□□□ -0.81
ATRX-216ENST00000624403 DOCK9Q9BZ29 2069 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 BBIP1A8MTZ0 92 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 H0YIV9 168 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 TOR1BO14657 336 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 MRASO14807 208 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 NRP2O60462 931 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 ZNF217O75362 1048 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 SEC22BO75396 215 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 SLC22A3O75751 556 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 RSL1D1O76021 490 aaKnown RBP9.97□□□□□ -0.81
ATRX-216ENST00000624403 PDE5AO76074 875 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 RASGRP1O95267 797 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 ATP6V1G2O95670 118 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 FBXO45P0C2W1 286 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 C1GALT1C1LP0DN25 315 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 MTHFD1P11586 935 aaKnown RBP9.97□□□□□ -0.81
ATRX-216ENST00000624403 CAPN3P20807 821 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 PRPH2P23942 346 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 CCND1P24385 295 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 IL12AP29459 219 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 RABIFP47224 123 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 ZFP36L2P47974 494 aaKnown RBP9.97□□□□□ -0.81
ATRX-216ENST00000624403 PXNP49023 591 aaPredicted RBP9.97□□□□□ -0.81
ATRX-216ENST00000624403 THOP1P52888 689 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 SRP54P61011 504 aaKnown RBP9.97□□□□□ -0.81
ATRX-216ENST00000624403 CTBSQ01459 385 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 ZNF33BQ06732 778 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 TBL3Q12788 808 aaKnown RBP9.97□□□□□ -0.81
ATRX-216ENST00000624403 CSTF3Q12996 717 aaKnown RBP9.97□□□□□ -0.81
ATRX-216ENST00000624403 MAD2L1Q13257 205 aaPredicted RBP9.97□□□□□ -0.81
ATRX-216ENST00000624403 RIPK1Q13546 671 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 LRP8Q14114 963 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 RPE65Q16518 533 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 MMEL1Q495T6 779 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 THEMIS2Q5TEJ8 643 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 ATG9BQ674R7 924 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 PGM2L1Q6PCE3 622 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 CYP20A1Q6UW02 462 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 NXPE4Q6UWF7 544 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 LCTLQ6UWM7 567 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 TMPRSS11BQ86T26 416 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 PGAM4Q8N0Y7 254 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 RNF175Q8N4F7 328 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 MAFAQ8NHW3 353 aaPredicted RBP9.97□□□□□ -0.81
ATRX-216ENST00000624403 WDR20Q8TBZ3 569 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 SLC5A11Q8WWX8 675 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 CMTM7Q96FZ5 175 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 CAMK1GQ96NX5 476 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 RASSF4Q9H2L5 321 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 ACTL8Q9H568 366 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 MVB12BQ9H7P6 319 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 WDR41Q9HAD4 459 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 SLC52A3Q9NQ40 469 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 TMEM45AQ9NWC5 275 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 NDE1Q9NXR1 346 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 ASIC5Q9NY37 505 aa9.97□□□□□ -0.81
ATRX-216ENST00000624403 SCHIP1Q9P0W5 487 aaPredicted RBP9.97□□□□□ -0.81
ATRX-216ENST00000624403 EIF3LQ9Y262 564 aaKnown RBP9.97□□□□□ -0.81
ATRX-216ENST00000624403 PRAMEF33A0A0G2JMD5 474 aa9.96□□□□□ -0.82
ATRX-216ENST00000624403 FAM234BA2RU67 622 aa9.96□□□□□ -0.82
ATRX-216ENST00000624403 OR52A4PA6NMU1 304 aa9.96□□□□□ -0.82
ATRX-216ENST00000624403 ZNF839A8K0R7 811 aa9.96□□□□□ -0.82
ATRX-216ENST00000624403 NPIPB8E9PQR5 432 aa9.96□□□□□ -0.82
ATRX-216ENST00000624403 ERVH48-1M5A8F1 160 aa9.96□□□□□ -0.82
ATRX-216ENST00000624403 ANKRD28O15084 1053 aa9.96□□□□□ -0.82
ATRX-216ENST00000624403 CFLARO15519 480 aa9.96□□□□□ -0.82
ATRX-216ENST00000624403 CIB2O75838 187 aa9.96□□□□□ -0.82
ATRX-216ENST00000624403 EML2O95834 649 aa9.96□□□□□ -0.82
ATRX-216ENST00000624403 PCNAP12004 261 aa9.96□□□□□ -0.82
ATRX-216ENST00000624403 CDH1P12830 882 aa9.96□□□□□ -0.82
ATRX-216ENST00000624403 AK4P27144 223 aaPredicted RBP9.96□□□□□ -0.82
ATRX-216ENST00000624403 PKLRP30613 574 aa9.96□□□□□ -0.82
ATRX-216ENST00000624403 NUDT1P36639 197 aa9.96□□□□□ -0.82
ATRX-216ENST00000624403 DPP6P42658 865 aa9.96□□□□□ -0.82
ATRX-216ENST00000624403 POLR2JP52435 117 aaKnown RBP9.96□□□□□ -0.82
ATRX-216ENST00000624403 PSME3P61289 254 aa9.96□□□□□ -0.82
ATRX-216ENST00000624403 DDX39BQ13838 428 aaKnown RBP9.96□□□□□ -0.82
ATRX-216ENST00000624403 SLBPQ14493 270 aaKnown RBP eCLIP9.96□□□□□ -0.82
ATRX-216ENST00000624403 KRT33BQ14525 404 aa9.96□□□□□ -0.82
ATRX-216ENST00000624403 KPNB1Q14974 876 aaKnown RBP9.96□□□□□ -0.82
ATRX-216ENST00000624403 KIAA0040Q15053 153 aa9.96□□□□□ -0.82
ATRX-216ENST00000624403 TCEA2Q15560 299 aa9.96□□□□□ -0.82
ATRX-216ENST00000624403 VPS26BQ4G0F5 336 aa9.96□□□□□ -0.82
ATRX-216ENST00000624403 ADNP2Q6IQ32 1131 aa9.96□□□□□ -0.82
ATRX-216ENST00000624403 MED27Q6P2C8 311 aa9.96□□□□□ -0.82
ATRX-216ENST00000624403 HACD2Q6Y1H2 254 aa9.96□□□□□ -0.82
ATRX-216ENST00000624403 BNC2Q6ZN30 1099 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms