RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 ZNF773Q6PK81 442 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 AGTRAPQ6RW13 159 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 SPESP1Q6UW49 350 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 SERPINA11Q86U17 422 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 KLHDC8AQ8IYD2 350 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 HS3ST5Q8IZT8 346 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 TERB1Q8NA31 727 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 ZNF420Q8TAQ5 688 aaPredicted RBP8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 C12orf43Q96C57 262 aaKnown RBP8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 MED8Q96G25 268 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 PANX1Q96RD7 426 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 MBOAT4Q96T53 435 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 TUBA1CQ9BQE3 449 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 CCM2Q9BSQ5 444 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 REXO4Q9GZR2 422 aaKnown RBP8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 MTG2Q9H4K7 406 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 C11orf49Q9H6J7 331 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 SPATA6Q9NWH7 488 aaPredicted RBP8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 STOX2Q9P2F5 926 aaPredicted RBP8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 ATXN10Q9UBB4 475 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 EBF1Q9UH73 591 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 SAMD4AQ9UPU9 718 aaKnown RBP8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 RUVBL1Q9Y265 456 aaKnown RBP8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 INSL6Q9Y581 213 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 SLC5A10A0PJK1 596 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 H0YIV9 168 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 CLIC1O00299 241 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 NOBOXO60393 691 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 E2F6O75461 281 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 MYO1DO94832 1006 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 SRPRAP08240 638 aaKnown RBP8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 ELFN1P0C7U0 828 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 CDK4P11802 303 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 HSD3B1P14060 373 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 COX7A2P14406 83 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 EEF1B2P24534 225 aaKnown RBP8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 HSD3B2P26439 372 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 WEE1P30291 646 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 MMP12P39900 470 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 DCTP40126 519 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 PREPP48147 710 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 TPD52P55327 224 aaPredicted RBP8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 NUP107P57740 925 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 C21orf58P58505 322 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 TMEM115Q12893 351 aaPredicted RBP8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 SLC14A1Q13336 389 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 ACOX1Q15067 660 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 ERAP2Q6P179 960 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 ZNF551Q7Z340 670 aaPredicted RBP8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 HIPK1Q86Z02 1210 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 OR7A2PQ8NGA2 310 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 OR8J2Q8NGG1 315 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 STARD8Q92502 1023 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 AP2M1Q96CW1 435 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 METTL2AQ96IZ6 378 aaKnown RBP8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 ZSWIM3Q96MP5 696 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 MTERF1Q99551 399 aaKnown RBP8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 BRF2Q9HAW0 419 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 IL23AQ9NPF7 189 aa8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 FAM120CQ9NX05 1096 aaKnown RBP8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 MTCL1Q9Y4B5 1905 aaKnown RBP8.06□□□□□ -1.12
SND1-IT1-201ENST00000623342 A0A0C4DFX4 3053 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 MAGEB17A8MXT2 336 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 SLC9A3R1O14745 358 aaPredicted RBP8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 HS6ST1O60243 411 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 SCN2BO60939 215 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 EPN2O95208 641 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 CPNE6O95741 557 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 ENGP17813 658 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 DCKP27707 260 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 MAGEA2P43356 314 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 BDKRB1P46663 353 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 VASPP50552 380 aaPredicted RBP8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 WNT3P56703 355 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 NTHL1P78549 312 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 CTBSQ01459 385 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 PCDH1Q08174 1060 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 ACSM2AQ08AH3 577 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 BIRC2Q13490 618 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 DDX39BQ13838 428 aaKnown RBP8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 POM121L1PQ3SYA9 428 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 CCSMST1Q4G0I0 132 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 PRSS36Q5K4E3 855 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 BROXQ5VW32 411 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 ACSM2BQ68CK6 577 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 ERICH5Q6P6B1 374 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 LIPIQ6XZB0 460 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 CHST15Q7LFX5 561 aaPredicted RBP8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 TMEM179BQ7Z7N9 219 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 NRSN1Q8IZ57 195 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 PGBD3Q8N328 593 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 OR56A3Q8NH54 315 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 HDAC2Q92769 488 aaKnown RBP8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 CNDP2Q96KP4 475 aaKnown RBP8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 FOPNLQ96NB1 174 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 PKP4Q99569 1192 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 DOK1Q99704 481 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 AMBRA1Q9C0C7 1298 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 SGK2Q9HBY8 427 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 AASDHPPTQ9NRN7 309 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms