RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 DERL2Q9GZP9 239 aa12.12□□□□□ -0.47
LITAF-221ENST00000622633 TAS2R13Q9NYV9 303 aa12.12□□□□□ -0.47
LITAF-221ENST00000622633 REV1Q9UBZ9 1251 aa12.12□□□□□ -0.47
LITAF-221ENST00000622633 TSR3Q9UJK0 312 aaKnown RBP12.12□□□□□ -0.47
LITAF-221ENST00000622633 NOD1Q9Y239 953 aa12.12□□□□□ -0.47
LITAF-221ENST00000622633 PCDHB5Q9Y5E4 795 aa12.12□□□□□ -0.47
LITAF-221ENST00000622633 HRH3Q9Y5N1 445 aa12.12□□□□□ -0.47
LITAF-221ENST00000622633 TRPM7Q96QT4 1865 aa12.12□□□□□ -0.47
LITAF-221ENST00000622633 A0A1W2PP18 115 aa12.12□□□□□ -0.47
LITAF-221ENST00000622633 NDUFS3O75489 264 aa12.12□□□□□ -0.47
LITAF-221ENST00000622633 MT-ND1P03886 318 aa12.12□□□□□ -0.47
LITAF-221ENST00000622633 CYBBP04839 570 aa12.12□□□□□ -0.47
LITAF-221ENST00000622633 SERPINF2P08697 491 aa12.12□□□□□ -0.47
LITAF-221ENST00000622633 TRAPPC2P0DI81 140 aa12.12□□□□□ -0.47
LITAF-221ENST00000622633 TRAPPC2BP0DI82 140 aa12.12□□□□□ -0.47
LITAF-221ENST00000622633 CTGFP29279 349 aa12.12□□□□□ -0.47
LITAF-221ENST00000622633 ERP29P30040 261 aaKnown RBP12.12□□□□□ -0.47
LITAF-221ENST00000622633 RGRP47804 291 aa12.12□□□□□ -0.47
LITAF-221ENST00000622633 BNC1Q01954 994 aa12.12□□□□□ -0.47
LITAF-221ENST00000622633 SLAMF1Q13291 335 aa12.12□□□□□ -0.47
LITAF-221ENST00000622633 ANKRD39Q53RE8 183 aa12.12□□□□□ -0.47
LITAF-221ENST00000622633 TXNDC11Q6PKC3 985 aa12.12□□□□□ -0.47
LITAF-221ENST00000622633 GLB1LQ6UWU2 654 aa12.12□□□□□ -0.47
LITAF-221ENST00000622633 RTN4RL1Q86UN2 441 aaPredicted RBP12.12□□□□□ -0.47
LITAF-221ENST00000622633 KIF18BQ86Y91 864 aa12.12□□□□□ -0.47
LITAF-221ENST00000622633 RASGRP3Q8IV61 690 aa12.12□□□□□ -0.47
LITAF-221ENST00000622633 DCBLD1Q8N8Z6 715 aa12.12□□□□□ -0.47
LITAF-221ENST00000622633 KLHL6Q8WZ60 621 aa12.12□□□□□ -0.47
LITAF-221ENST00000622633 ST8SIA4Q92187 359 aa12.12□□□□□ -0.47
LITAF-221ENST00000622633 SLC7A6Q92536 515 aa12.12□□□□□ -0.47
LITAF-221ENST00000622633 FUBP1Q96AE4 644 aaKnown RBP12.12□□□□□ -0.47
LITAF-221ENST00000622633 EXOC2Q96KP1 924 aa12.12□□□□□ -0.47
LITAF-221ENST00000622633 TRIB3Q96RU7 358 aa12.12□□□□□ -0.47
LITAF-221ENST00000622633 SPON2Q9BUD6 331 aa12.12□□□□□ -0.47
LITAF-221ENST00000622633 REXO4Q9GZR2 422 aaKnown RBP12.12□□□□□ -0.47
LITAF-221ENST00000622633 TRMT13Q9NUP7 481 aaKnown RBP12.12□□□□□ -0.47
LITAF-221ENST00000622633 TMEM39AQ9NV64 488 aa12.12□□□□□ -0.47
LITAF-221ENST00000622633 ZNF224Q9NZL3 707 aa12.12□□□□□ -0.47
LITAF-221ENST00000622633 ZNF225Q9UK10 706 aa12.12□□□□□ -0.47
LITAF-221ENST00000622633 GRIP1Q9Y3R0 1128 aa12.12□□□□□ -0.47
LITAF-221ENST00000622633 V9GYQ6 96 aa12.12□□□□□ -0.47
LITAF-221ENST00000622633 TDRD15B5MCY1 1934 aaKnown RBP12.12□□□□□ -0.47
LITAF-221ENST00000622633 PATJQ8NI35 1801 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 LCHNA4D1U4 455 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 SYN3O14994 580 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 RGS5O15539 181 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 ARHGEF9O43307 516 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 ECDO95905 644 aaPredicted RBP12.11□□□□□ -0.47
LITAF-221ENST00000622633 HTR1AP08908 422 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 GRK3P35626 688 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 HOXA1P49639 335 aaPredicted RBP12.11□□□□□ -0.47
LITAF-221ENST00000622633 KCNQ1P51787 676 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 KCNK10P57789 538 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 YBEYP58557 167 aaPredicted RBP12.11□□□□□ -0.47
LITAF-221ENST00000622633 SNRPD2P62316 118 aaKnown RBP12.11□□□□□ -0.47
LITAF-221ENST00000622633 ATP6AP1Q15904 470 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 PTPRNQ16849 979 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 GPAT3Q53EU6 434 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 ZSWIM9Q86XI8 627 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 GOT1L1Q8NHS2 421 aaPredicted RBP12.11□□□□□ -0.47
LITAF-221ENST00000622633 AHCYL2Q96HN2 611 aaKnown RBP12.11□□□□□ -0.47
LITAF-221ENST00000622633 FUBP3Q96I24 572 aaKnown RBP eCLIP12.11□□□□□ -0.47
LITAF-221ENST00000622633 ZNF599Q96NL3 588 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 NECTIN4Q96NY8 510 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 CYP2S1Q96SQ9 504 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 C9orf16Q9BUW7 83 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 ALG2Q9H553 416 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 PDFQ9HBH1 243 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 NECTIN3Q9NQS3 549 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 NLE1Q9NVX2 485 aaPredicted RBP12.11□□□□□ -0.47
LITAF-221ENST00000622633 KIF17Q9P2E2 1029 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 FNDC3AQ9Y2H6 1198 aaKnown RBP12.11□□□□□ -0.47
LITAF-221ENST00000622633 OAS3Q9Y6K5 1087 aaKnown RBP12.11□□□□□ -0.47
LITAF-221ENST00000622633 MYO16Q9Y6X6 1858 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 DOCK4Q8N1I0 1966 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 SCN10AQ9Y5Y9 1956 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 RAB19A4D1S5 217 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 SH3D21A4FU49 640 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 AGAP5A6NIR3 686 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 EI24O14681 340 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 NUPL2O15504 423 aaKnown RBP12.11□□□□□ -0.47
LITAF-221ENST00000622633 VPS4BO75351 444 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 INMTO95050 263 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 APOA1P02647 267 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 ASGR1P07306 291 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 RPS17P08708 135 aaKnown RBP12.11□□□□□ -0.47
LITAF-221ENST00000622633 HSMCR30P0CW71 290 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 TACR2P21452 398 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 ZFP36L2P47974 494 aaKnown RBP12.11□□□□□ -0.47
LITAF-221ENST00000622633 ZNF140P52738 457 aaPredicted RBP12.11□□□□□ -0.47
LITAF-221ENST00000622633 TNK1Q13470 666 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 RBBP7Q16576 425 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 CTXN3Q4LDR2 81 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 CLLU1OSQ5K130 101 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 SPATA19Q7Z5L4 167 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 GPAT4Q86UL3 456 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 OR2T11Q8NH01 316 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 SOCS4Q8WXH5 440 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 UFD1Q92890 307 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 YIPF5Q969M3 257 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms