RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 CLCA3PQ9Y6N3 262 aa7.71□□□□□ -1.17
VPS11-209ENST00000622309 A0A075B6Q4 140 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 A0A1W2PPL8 197 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 RPS10-NUDT3A0A1W2PQS6 291 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 SPDYE2BA6NHP3 402 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 ORC5O43913 435 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 ALDOCP09972 364 aaKnown RBP7.71□□□□□ -1.18
VPS11-209ENST00000622309 SPDYE6P0CI01 402 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 CD19P15391 556 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 POU3F4P49335 361 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 ZNF91Q05481 1191 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 ELP6Q0PNE2 266 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 ZNF284Q2VY69 593 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 UGT3A2Q3SY77 523 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 TIMM50Q3ZCQ8 353 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 IQCCQ4KMZ1 466 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 GNASQ5JWF2 1037 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 PRSS36Q5K4E3 855 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 LCN1P1Q5VSP4 162 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 PRAMEF18Q5VWM3 479 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 IER5Q5VY09 327 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 DENND1BQ6P3S1 775 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 BHLHB9Q6PI77 547 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 C17orf107Q6ZR85 190 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 FAM92BQ6ZTR7 304 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 LARP4Q71RC2 724 aaKnown RBP eCLIP7.71□□□□□ -1.18
VPS11-209ENST00000622309 CBARPQ8N350 705 aaPredicted RBP7.71□□□□□ -1.18
VPS11-209ENST00000622309 LRRC17Q8N6Y2 441 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 COLGALT1Q8NBJ5 622 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 C19orf18Q8NEA5 215 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 ACVR1CQ8NER5 493 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 OR5T2Q8NGG2 359 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 ARL5BQ96KC2 179 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 QRFPRQ96P65 431 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 MENTQ9BUN1 341 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 APOL5Q9BWW9 433 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 SORBS1Q9BX66 1292 aaKnown RBP7.71□□□□□ -1.18
VPS11-209ENST00000622309 SRRQ9GZT4 340 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 ADAM19Q9H013 955 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 TTYH1Q9H313 450 aaPredicted RBP7.71□□□□□ -1.18
VPS11-209ENST00000622309 IL1RAPQ9NPH3 570 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 GPATCH2LQ9NWQ4 482 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 LIMD1Q9UGP4 676 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 MAB21L2Q9Y586 359 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 OAS3Q9Y6K5 1087 aaKnown RBP7.71□□□□□ -1.18
VPS11-209ENST00000622309 TRAV19A0A0A6YYK7 116 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 M0R082 166 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 SGCEO43556 437 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 SNAPINO95295 136 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 FHP07954 510 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 JUPP14923 745 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 MAP2K3P46734 347 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 BCAT1P54687 386 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 CARD18P57730 90 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 YWHAHQ04917 246 aaPredicted RBP7.71□□□□□ -1.18
VPS11-209ENST00000622309 IKZF1Q13422 519 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 FSCN1Q16658 493 aaKnown RBP7.71□□□□□ -1.18
VPS11-209ENST00000622309 SWI5Q1ZZU3 235 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 PYDC2Q56P42 97 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 LUZP2Q86TE4 346 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 NKAIN3Q8N8D7 197 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 CEP76Q8TAP6 659 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 POC1BQ8TC44 478 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 FBLIM1Q8WUP2 373 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 USP7Q93009 1102 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 CAPNS2Q96L46 248 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 TEPSINQ96N21 525 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 FCRL3Q96P31 734 aaPredicted RBP7.71□□□□□ -1.18
VPS11-209ENST00000622309 MCCC1Q96RQ3 725 aaPredicted RBP7.71□□□□□ -1.18
VPS11-209ENST00000622309 PEBP4Q96S96 227 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 C1QTNF6Q9BXI9 259 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 GSX2Q9BZM3 304 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 AKTIPQ9H8T0 292 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 EXOSC4Q9NPD3 245 aaKnown RBP7.71□□□□□ -1.18
VPS11-209ENST00000622309 SDHAF2Q9NX18 166 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 COA4Q9NYJ1 87 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 MGAT4BQ9UQ53 548 aa7.71□□□□□ -1.18
VPS11-209ENST00000622309 NEMP2A6NFY4 417 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 MITFO75030 526 aaPredicted RBP7.7□□□□□ -1.18
VPS11-209ENST00000622309 ALDH1A1P00352 501 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 TSPAN19P0C672 248 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 ARP10275 920 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 ITGAMP11215 1152 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 CHMP24386 653 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 GRK5P34947 590 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 CAP2P40123 477 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 CLCNKAP51800 687 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 CDH8P55286 799 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 YWHAEP62258 255 aaKnown RBP7.7□□□□□ -1.18
VPS11-209ENST00000622309 CAMK1Q14012 370 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 LARS2Q15031 903 aaKnown RBP7.7□□□□□ -1.18
VPS11-209ENST00000622309 SPDYE2Q495Y8 402 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 C15orf39Q6ZRI6 1047 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 RPS27LQ71UM5 84 aaKnown RBP7.7□□□□□ -1.18
VPS11-209ENST00000622309 EIF3MQ7L2H7 374 aaKnown RBP7.7□□□□□ -1.18
VPS11-209ENST00000622309 RNF180Q86T96 592 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 KCNMB4Q86W47 210 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 HIPK1Q86Z02 1210 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 DNAAF3Q8N9W5 541 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 SMG7Q92540 1137 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms