RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 SPATA6Q9NWH7 488 aaPredicted RBP9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 PAK1IP1Q9NWT1 392 aaPredicted RBP9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 RHBDL2Q9NX52 303 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 SPG21Q9NZD8 308 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 B4GALT6Q9UBX8 382 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 BTNL2Q9UIR0 455 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 BAG5Q9UL15 447 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 RUVBL1Q9Y265 456 aaKnown RBP9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 TPRKBQ9Y3C4 175 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 TRAV19A0A0A6YYK7 116 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 TSPAN11A1L157 253 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 CFAP99D6REC4 459 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 GRM6O15303 877 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 SGTAO43765 313 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 LILRB3O75022 631 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 MITFO75030 526 aaPredicted RBP9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 JRKO75564 520 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 SULT1C4O75897 302 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 SLCO2B1O94956 709 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 EPN2O95208 641 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 ANGPTL1O95841 491 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 FABP3P05413 133 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 CYP2A6P11509 494 aaPredicted RBP9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 ZNF30P17039 623 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 LAG3P18627 525 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 PPIBP23284 216 aaKnown RBP9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 GABRR2P28476 465 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 VIPR1P32241 457 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 HNF4AP41235 474 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 HALP42357 657 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 STK19P49842 368 aaPredicted RBP9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 ARHGDIAP52565 204 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 MLLT10P55197 1068 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 ITGA1P56199 1179 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 SLC35A2P78381 396 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 PHEXP78562 749 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 IL5RAQ01344 420 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 CREMQ03060 361 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 MVKQ03426 396 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 HSPA14Q0VDF9 509 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 SLC14A1Q13336 389 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 ZNF846Q147U1 533 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 SPCS2Q15005 226 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 CTF1Q16619 201 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 IQCCQ4KMZ1 466 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 GRHL2Q6ISB3 625 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 ZCCHC8Q6NZY4 707 aaKnown RBP9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 FAHD1Q6P587 224 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 GALNT18Q6P9A2 607 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 CNKSR3Q6P9H4 555 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 GAREM2Q75VX8 874 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 CEP68Q76N32 757 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 CAMKMTQ7Z624 323 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 ANKRD46Q86W74 232 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 SYT12Q8IV01 421 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 ABHD11Q8NFV4 315 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 BHMTQ93088 406 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 C11orf24Q96F05 449 aaPredicted RBP9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 VMP1Q96GC9 406 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 EGLN2Q96KS0 407 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 ZNF347Q96SE7 839 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 BARD1Q99728 777 aaKnown RBP9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 REXO4Q9GZR2 422 aaKnown RBP9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 CHST8Q9H2A9 424 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 BRF2Q9HAW0 419 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 CCNB1IP1Q9NPC3 277 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 SCN3BQ9NY72 215 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 LMCD1Q9NZU5 365 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 ERVK-18Q9QC07 812 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 MBD1Q9UIS9 605 aaPredicted RBP9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 SLC25A13Q9UJS0 675 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 NDRG4Q9ULP0 352 aaKnown RBP9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 ABCG2Q9UNQ0 655 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 SLC22A14Q9Y267 594 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 PCDHB11Q9Y5F2 797 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 LTBP2Q14767 1821 aa9.32□□□□□ -0.92
IGHV3-54-201ENST00000622166 MAGEB17A8MXT2 336 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 H0YIV9 168 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 LEFTY2O00292 366 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 QSOX1O00391 747 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 SLC22A1O15245 554 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 AOC2O75106 756 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 PSIP1O75475 530 aaKnown RBP9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 MYO1DO94832 1006 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 INMTO95050 263 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 LRATO95237 230 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 ZNF682O95780 498 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 B3GALT4O96024 378 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 FTH1P02794 183 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 ABCB1P08183 1280 aaPredicted RBP9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 GSTM1P09488 218 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 CD22P20273 847 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 EFNA1P20827 205 aaPredicted RBP9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 ITPKAP23677 461 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 CD6P30203 668 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 HOXA9P31269 272 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 PCGF2P35227 344 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 ASMTP46597 345 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 RXRGP48443 463 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 MAPK10P53779 464 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms