RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 ZNF550Q7Z398 422 aa11.33□□□□□ -0.6
CLTC-215ENST00000621829 SIDT2Q8NBJ9 832 aaKnown RBP11.33□□□□□ -0.6
CLTC-215ENST00000621829 OR6Q1Q8NGQ2 317 aa11.33□□□□□ -0.6
CLTC-215ENST00000621829 SLC41A3Q96GZ6 507 aa11.33□□□□□ -0.6
CLTC-215ENST00000621829 TCEAL7Q9BRU2 100 aa11.33□□□□□ -0.6
CLTC-215ENST00000621829 XPNPEP1Q9NQW7 623 aa11.33□□□□□ -0.6
CLTC-215ENST00000621829 MFSD11O43934 449 aa11.33□□□□□ -0.6
CLTC-215ENST00000621829 KERAO60938 352 aa11.33□□□□□ -0.6
CLTC-215ENST00000621829 STK16O75716 305 aa11.33□□□□□ -0.6
CLTC-215ENST00000621829 CYB5AP00167 134 aa11.33□□□□□ -0.6
CLTC-215ENST00000621829 ADH6P28332 368 aa11.33□□□□□ -0.6
CLTC-215ENST00000621829 ZNF648Q5T619 568 aaPredicted RBP11.33□□□□□ -0.6
CLTC-215ENST00000621829 CXorf40AQ8TE69 158 aa11.33□□□□□ -0.6
CLTC-215ENST00000621829 GRHL3Q8TE85 626 aa11.33□□□□□ -0.6
CLTC-215ENST00000621829 YIPF4Q9BSR8 244 aa11.33□□□□□ -0.6
CLTC-215ENST00000621829 AGO3Q9H9G7 860 aaKnown RBP11.33□□□□□ -0.6
CLTC-215ENST00000621829 NLKQ9UBE8 527 aa11.33□□□□□ -0.6
CLTC-215ENST00000621829 AGPAT2O15120 278 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 CREBL2O60519 120 aaPredicted RBP11.32□□□□□ -0.6
CLTC-215ENST00000621829 CHRNA1P02708 482 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 AOC1P19801 751 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 CDK10Q15131 360 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 PROKR2Q8NFJ6 384 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 LILRB4Q8NHJ6 448 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 BIRC7Q96CA5 298 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 PTPN18Q99952 460 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 GBA3Q9H227 469 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 ZBTB26Q9HCK0 441 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 ZNF70Q9UC06 446 aaPredicted RBP11.32□□□□□ -0.6
CLTC-215ENST00000621829 RFPL3O75679 317 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 RGS9O75916 674 aaPredicted RBP11.32□□□□□ -0.6
CLTC-215ENST00000621829 SCGB1D1O95968 90 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 CSF1RP07333 972 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 ENGP17813 658 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 GRK6P43250 576 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 PGM5Q15124 567 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 WSCD1Q658N2 575 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 TERB2Q8NHR7 220 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 NEIL3Q8TAT5 605 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 POC1BQ8TC44 478 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 PARK7Q99497 189 aaKnown RBP11.32□□□□□ -0.6
CLTC-215ENST00000621829 FBXW2Q9UKT8 454 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 CDC14AQ9UNH5 594 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 ATF5Q9Y2D1 282 aaPredicted RBP11.32□□□□□ -0.6
CLTC-215ENST00000621829 AP1M2Q9Y6Q5 423 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 A0A0A6YYH2 397 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 A6NJ64 397 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 TGFB2P61812 414 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 FAM83HQ6ZRV2 1179 aaPredicted RBP11.32□□□□□ -0.6
CLTC-215ENST00000621829 ASRGL1Q7L266 308 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 MRPL41Q8IXM3 137 aaKnown RBP11.32□□□□□ -0.6
CLTC-215ENST00000621829 CFAP52Q8N1V2 620 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 PNLDC1Q8NA58 520 aaKnown RBP11.32□□□□□ -0.6
CLTC-215ENST00000621829 BBS1Q8NFJ9 593 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 LRFN1Q9P244 771 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 NUFIP1Q9UHK0 495 aaKnown RBP11.32□□□□□ -0.6
CLTC-215ENST00000621829 PCDHGA6Q9Y5G7 932 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 HLA-DPB1P04440 258 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 FGF1P05230 155 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 RETP07949 1114 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 GJA5P36382 358 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 TNFSF9P41273 254 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 SF1Q15637 639 aaKnown RBP11.32□□□□□ -0.6
CLTC-215ENST00000621829 CFAP77Q6ZQR2 320 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 SSX9Q7RTT3 188 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 FAM129CQ86XR2 697 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 MAP4K3Q8IVH8 894 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 ARHGAP12Q8IWW6 846 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 SP8Q8IXZ3 490 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 ZBTB2Q8N680 514 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 TMEM185AQ8NFB2 350 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 DNAJB3Q8WWF6 145 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 FZD4Q9ULV1 537 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 A0A1B0GVT2 93 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 CD8B2A6NJW9 211 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 ARPC5O15511 151 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 CD8BP10966 210 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 PTNP21246 168 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 MMP8P22894 467 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 CAMLGP49069 296 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 DGKQP52824 942 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 LRP8Q14114 963 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 RAVER1Q8IY67 606 aaKnown RBP11.32□□□□□ -0.6
CLTC-215ENST00000621829 ZNF565Q8N9K5 539 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 OR5AK3PQ8NH89 298 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 PBDC1Q9BVG4 233 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 CNTN6Q9UQ52 1028 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 MYPNQ86TC9 1320 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 TNFSF12O43508 249 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 BCAS2O75934 225 aaPredicted RBP11.32□□□□□ -0.6
CLTC-215ENST00000621829 CTSEP14091 401 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 RPIAP49247 311 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 CTBP2P56545 445 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 TMEM44Q2T9K0 475 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 USP41Q3LFD5 358 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 C14orf28Q4W4Y0 310 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 CAPN13Q6MZZ7 669 aaPredicted RBP11.32□□□□□ -0.6
CLTC-215ENST00000621829 C1orf186Q6ZWK4 172 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 SLC22A15Q8IZD6 547 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms