RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 PRAMEP78395 509 aa15.9■□□□□ 0.14
TARDBP-225ENST00000621715 ADORA2A-AS1P86434 159 aa15.9■□□□□ 0.14
TARDBP-225ENST00000621715 NAA30Q147X3 362 aaPredicted RBP15.9■□□□□ 0.14
TARDBP-225ENST00000621715 HIBCHQ6NVY1 386 aaPredicted RBP15.9■□□□□ 0.14
TARDBP-225ENST00000621715 SUSD1Q6UWL2 747 aa15.9■□□□□ 0.14
TARDBP-225ENST00000621715 PPP1R21Q6ZMI0 780 aa15.9■□□□□ 0.14
TARDBP-225ENST00000621715 MRGPRGQ86SM5 289 aa15.9■□□□□ 0.14
TARDBP-225ENST00000621715 ZNF295-AS1Q8N0V1 137 aa15.9■□□□□ 0.14
TARDBP-225ENST00000621715 RAD51AP1Q96B01 352 aa15.9■□□□□ 0.14
TARDBP-225ENST00000621715 LURAP1Q96LR2 239 aa15.9■□□□□ 0.14
TARDBP-225ENST00000621715 CATSPERZQ9NTU4 200 aa15.9■□□□□ 0.14
TARDBP-225ENST00000621715 TRPC4Q9UBN4 977 aa15.9■□□□□ 0.14
TARDBP-225ENST00000621715 KLF2Q9Y5W3 355 aaPredicted RBP15.9■□□□□ 0.14
TARDBP-225ENST00000621715 FAM169AQ9Y6X4 670 aa15.9■□□□□ 0.14
TARDBP-225ENST00000621715 MED13LQ71F56 2210 aa15.9■□□□□ 0.14
TARDBP-225ENST00000621715 MTORP42345 2549 aa15.9■□□□□ 0.14
TARDBP-225ENST00000621715 LOC102723996A0A087X1L8 192 aa15.89■□□□□ 0.13
TARDBP-225ENST00000621715 CCL21O00585 134 aa15.89■□□□□ 0.13
TARDBP-225ENST00000621715 CD3EAPO15446 510 aaKnown RBP15.89■□□□□ 0.13
TARDBP-225ENST00000621715 FKBP9O95302 570 aa15.89■□□□□ 0.13
TARDBP-225ENST00000621715 BMP10O95393 424 aa15.89■□□□□ 0.13
TARDBP-225ENST00000621715 ZSCAN5DPP0CG00 497 aa15.89■□□□□ 0.13
TARDBP-225ENST00000621715 ERGP11308 486 aa15.89■□□□□ 0.13
TARDBP-225ENST00000621715 HTR1EP28566 365 aa15.89■□□□□ 0.13
TARDBP-225ENST00000621715 SLC26A3P40879 764 aa15.89■□□□□ 0.13
TARDBP-225ENST00000621715 CA7P43166 264 aa15.89■□□□□ 0.13
TARDBP-225ENST00000621715 KRTAP10-9P60411 292 aa15.89■□□□□ 0.13
TARDBP-225ENST00000621715 MAT1AQ00266 395 aaKnown RBP15.89■□□□□ 0.13
TARDBP-225ENST00000621715 DSG2Q14126 1118 aa15.89■□□□□ 0.13
TARDBP-225ENST00000621715 GBX1Q14549 363 aa15.89■□□□□ 0.13
TARDBP-225ENST00000621715 ZNF630Q2M218 657 aaPredicted RBP15.89■□□□□ 0.13
TARDBP-225ENST00000621715 MUM1Q2TAK8 710 aa15.89■□□□□ 0.13
TARDBP-225ENST00000621715 PTRHD1Q6GMV3 140 aaKnown RBP15.89■□□□□ 0.13
TARDBP-225ENST00000621715 BNC2Q6ZN30 1099 aaPredicted RBP15.89■□□□□ 0.13
TARDBP-225ENST00000621715 ZC3H7AQ8IWR0 971 aaKnown RBP15.89■□□□□ 0.13
TARDBP-225ENST00000621715 SKA2Q8WVK7 121 aaPredicted RBP15.89■□□□□ 0.13
TARDBP-225ENST00000621715 MOCOSQ96EN8 888 aa15.89■□□□□ 0.13
TARDBP-225ENST00000621715 CABS1Q96KC9 395 aa15.89■□□□□ 0.13
TARDBP-225ENST00000621715 BIRC8Q96P09 236 aa15.89■□□□□ 0.13
TARDBP-225ENST00000621715 ZFYVE21Q9BQ24 234 aa15.89■□□□□ 0.13
TARDBP-225ENST00000621715 RAB11FIP5Q9BXF6 653 aa15.89■□□□□ 0.13
TARDBP-225ENST00000621715 TREX1Q9NSU2 369 aa15.89■□□□□ 0.13
TARDBP-225ENST00000621715 ABI3Q9P2A4 366 aa15.89■□□□□ 0.13
TARDBP-225ENST00000621715 SCN3AQ9NY46 2000 aa15.89■□□□□ 0.13
TARDBP-225ENST00000621715 IGHV3-20A0A0C4DH32 117 aa15.88■□□□□ 0.13
TARDBP-225ENST00000621715 GOLGA6L9A6NEM1 432 aa15.88■□□□□ 0.13
TARDBP-225ENST00000621715 OR2W5A6NFC9 320 aa15.88■□□□□ 0.13
TARDBP-225ENST00000621715 ERI2A8K979 691 aaKnown RBP15.88■□□□□ 0.13
TARDBP-225ENST00000621715 ARHGEF33A8MVX0 844 aa15.88■□□□□ 0.13
TARDBP-225ENST00000621715 ZNHIT1O43257 154 aa15.88■□□□□ 0.13
TARDBP-225ENST00000621715 LIASO43766 372 aa15.88■□□□□ 0.13
TARDBP-225ENST00000621715 NIPSNAP2O75323 286 aa15.88■□□□□ 0.13
TARDBP-225ENST00000621715 MATN4O95460 622 aa15.88■□□□□ 0.13
TARDBP-225ENST00000621715 STATHP02808 62 aa15.88■□□□□ 0.13
TARDBP-225ENST00000621715 F7P08709 466 aaPredicted RBP15.88■□□□□ 0.13
TARDBP-225ENST00000621715 NMBRP28336 390 aa15.88■□□□□ 0.13
TARDBP-225ENST00000621715 CETN2P41208 172 aa15.88■□□□□ 0.13
TARDBP-225ENST00000621715 TMED2Q15363 201 aa15.88■□□□□ 0.13
TARDBP-225ENST00000621715 INAQ16352 499 aa15.88■□□□□ 0.13
TARDBP-225ENST00000621715 LRRC8BQ6P9F7 803 aa15.88■□□□□ 0.13
TARDBP-225ENST00000621715 TMEM207Q6UWW9 146 aa15.88■□□□□ 0.13
TARDBP-225ENST00000621715 NCCRP1Q6ZVX7 275 aaPredicted RBP15.88■□□□□ 0.13
TARDBP-225ENST00000621715 PEX26Q7Z412 305 aa15.88■□□□□ 0.13
TARDBP-225ENST00000621715 PAQR7Q86WK9 346 aa15.88■□□□□ 0.13
TARDBP-225ENST00000621715 CSNK1A1LQ8N752 337 aa15.88■□□□□ 0.13
TARDBP-225ENST00000621715 IMMP1LQ96LU5 166 aa15.88■□□□□ 0.13
TARDBP-225ENST00000621715 OR2A5Q96R48 311 aa15.88■□□□□ 0.13
TARDBP-225ENST00000621715 TTC1Q99614 292 aa15.88■□□□□ 0.13
TARDBP-225ENST00000621715 PLCD4Q9BRC7 762 aa15.88■□□□□ 0.13
TARDBP-225ENST00000621715 YIPF2Q9BWQ6 316 aa15.88■□□□□ 0.13
TARDBP-225ENST00000621715 TSSK1BQ9BXA7 367 aa15.88■□□□□ 0.13
TARDBP-225ENST00000621715 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.88■□□□□ 0.13
TARDBP-225ENST00000621715 ZNF700Q9H0M5 742 aa15.88■□□□□ 0.13
TARDBP-225ENST00000621715 RAB6BQ9NRW1 208 aa15.88■□□□□ 0.13
TARDBP-225ENST00000621715 SEC14L3Q9UDX4 400 aa15.88■□□□□ 0.13
TARDBP-225ENST00000621715 AMFRQ9UKV5 643 aa15.88■□□□□ 0.13
TARDBP-225ENST00000621715 A0A0A6YYC8 382 aaPredicted RBP15.87■□□□□ 0.13
TARDBP-225ENST00000621715 GOLGA8KD6RF30 607 aa15.87■□□□□ 0.13
TARDBP-225ENST00000621715 GOLGA8TH3BQL2 631 aa15.87■□□□□ 0.13
TARDBP-225ENST00000621715 I3L1I5 382 aaPredicted RBP15.87■□□□□ 0.13
TARDBP-225ENST00000621715 MAN1A2O60476 641 aa15.87■□□□□ 0.13
TARDBP-225ENST00000621715 ZNF189O75820 626 aaPredicted RBP15.87■□□□□ 0.13
TARDBP-225ENST00000621715 IFNB1P01574 187 aa15.87■□□□□ 0.13
TARDBP-225ENST00000621715 PTMAP06454 111 aaKnown RBP15.87■□□□□ 0.13
TARDBP-225ENST00000621715 EIF3BP55884 814 aaKnown RBP15.87■□□□□ 0.13
TARDBP-225ENST00000621715 C3AR1Q16581 482 aa15.87■□□□□ 0.13
TARDBP-225ENST00000621715 ZXDCQ2QGD7 858 aaPredicted RBP15.87■□□□□ 0.13
TARDBP-225ENST00000621715 FCRLBQ6BAA4 426 aa15.87■□□□□ 0.13
TARDBP-225ENST00000621715 ZNF425Q6IV72 752 aa15.87■□□□□ 0.13
TARDBP-225ENST00000621715 TMEM205Q6UW68 189 aa15.87■□□□□ 0.13
TARDBP-225ENST00000621715 CES3Q6UWW8 571 aa15.87■□□□□ 0.13
TARDBP-225ENST00000621715 LANCL3Q6ZV70 420 aa15.87■□□□□ 0.13
TARDBP-225ENST00000621715 NEK10Q6ZWH5 1172 aa15.87■□□□□ 0.13
TARDBP-225ENST00000621715 OTOAQ7RTW8 1153 aa15.87■□□□□ 0.13
TARDBP-225ENST00000621715 PRSS41Q7RTY9 318 aa15.87■□□□□ 0.13
TARDBP-225ENST00000621715 PLD3Q8IV08 490 aa15.87■□□□□ 0.13
TARDBP-225ENST00000621715 ZNF808Q8N4W9 903 aaPredicted RBP15.87■□□□□ 0.13
TARDBP-225ENST00000621715 PPFIBP2Q8ND30 876 aa15.87■□□□□ 0.13
TARDBP-225ENST00000621715 C1orf54Q8WWF1 131 aa15.87■□□□□ 0.13
TARDBP-225ENST00000621715 MMABQ96EY8 250 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms