RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 TEFMQ96QE5 360 aaKnown RBP13.74□□□□□ -0.21
CBWD3-217ENST00000621474 EGFL8Q99944 293 aa13.74□□□□□ -0.21
CBWD3-217ENST00000621474 CCDC77Q9BR77 488 aa13.74□□□□□ -0.21
CBWD3-217ENST00000621474 PLCD4Q9BRC7 762 aa13.74□□□□□ -0.21
CBWD3-217ENST00000621474 ZPBPQ9BS86 351 aa13.74□□□□□ -0.21
CBWD3-217ENST00000621474 PPCSQ9HAB8 311 aa13.74□□□□□ -0.21
CBWD3-217ENST00000621474 PCMTD2Q9NV79 361 aa13.74□□□□□ -0.21
CBWD3-217ENST00000621474 PTBP2Q9UKA9 531 aaKnown RBP13.74□□□□□ -0.21
CBWD3-217ENST00000621474 RARRES3Q9UL19 164 aa13.74□□□□□ -0.21
CBWD3-217ENST00000621474 RNF112Q9ULX5 631 aa13.74□□□□□ -0.21
CBWD3-217ENST00000621474 SLC22A14Q9Y267 594 aa13.74□□□□□ -0.21
CBWD3-217ENST00000621474 TMEM184BQ9Y519 407 aaPredicted RBP13.74□□□□□ -0.21
CBWD3-217ENST00000621474 TEX51A0A1B0GUA7 166 aa13.73□□□□□ -0.21
CBWD3-217ENST00000621474 TMEM8BA6NDV4 472 aa13.73□□□□□ -0.21
CBWD3-217ENST00000621474 SMIM23A6NLE4 172 aa13.73□□□□□ -0.21
CBWD3-217ENST00000621474 PCBP4P57723 403 aaKnown RBP13.73□□□□□ -0.21
CBWD3-217ENST00000621474 CDKL4Q5MAI5 379 aa13.73□□□□□ -0.21
CBWD3-217ENST00000621474 THEMIS2Q5TEJ8 643 aa13.73□□□□□ -0.21
CBWD3-217ENST00000621474 TMEM164Q5U3C3 297 aa13.73□□□□□ -0.21
CBWD3-217ENST00000621474 FRMPD2BQ6IN97 320 aa13.73□□□□□ -0.21
CBWD3-217ENST00000621474 FBXO42Q6P3S6 717 aa13.73□□□□□ -0.21
CBWD3-217ENST00000621474 TIPARPQ7Z3E1 657 aaKnown RBP13.73□□□□□ -0.21
CBWD3-217ENST00000621474 EXT2Q93063 718 aa13.73□□□□□ -0.21
CBWD3-217ENST00000621474 ESAMQ96AP7 390 aa13.73□□□□□ -0.21
CBWD3-217ENST00000621474 RAXQ9Y2V3 346 aa13.73□□□□□ -0.21
CBWD3-217ENST00000621474 PABPN1LA6NDY0 278 aaKnown RBP13.72□□□□□ -0.21
CBWD3-217ENST00000621474 H7BY64 318 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 GOLGA8RI6L899 631 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 TK2O00142 265 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 MAP2K7O14733 419 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 CTIFO43310 598 aaKnown RBP13.72□□□□□ -0.21
CBWD3-217ENST00000621474 KLK8O60259 260 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 CDH16O75309 829 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 STK17BO94768 372 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 COL6A2P12110 1019 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 EIF2S3P41091 472 aaKnown RBP13.72□□□□□ -0.21
CBWD3-217ENST00000621474 GCGRP47871 477 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 ABATP80404 500 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 COL9A2Q14055 689 aaPredicted RBP13.72□□□□□ -0.21
CBWD3-217ENST00000621474 TGIF1Q15583 401 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 SULT1C3Q6IMI6 304 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 THOC6Q86W42 341 aaKnown RBP13.72□□□□□ -0.21
CBWD3-217ENST00000621474 BPHLQ86WA6 291 aaPredicted RBP13.72□□□□□ -0.21
CBWD3-217ENST00000621474 NEIL2Q969S2 332 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 ALKBH8Q96BT7 664 aaKnown RBP13.72□□□□□ -0.21
CBWD3-217ENST00000621474 ZNF285Q96NJ3 590 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 PRAP1Q96NZ9 151 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 ULBP3Q9BZM4 244 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 PCBD2Q9H0N5 130 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 ENAMQ9NRM1 1142 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 ANKMY1Q9P2S6 941 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 XPR1Q9UBH6 696 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 PTPRQQ9UMZ3 2332 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 LOC105369274A0A096LPK9 316 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 LOC102723532A0A0G2JNH3 316 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 A0A0J9YVX5 310 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 CCDC189A1A4V9 331 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 CCDC151A5D8V7 595 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 HAT1O14929 419 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 PRAMEF4O60810 478 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 KIAA0754O94854 1291 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 CCNDBP1O95273 360 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 PYGBP11216 843 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 CDH1P12830 882 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 CD82P27701 267 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 HSPA7P48741 367 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 AGTR2P50052 363 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 CSNK1G2P78368 415 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 CLN3Q13286 438 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 PRAMEF9Q5VWM5 478 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 CYB5D1Q6P9G0 228 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 OR4N4Q8N0Y3 316 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 ABHD11Q8NFV4 315 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 OR8K5Q8NH50 307 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 ACMSDQ8TDX5 336 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 CABS1Q96KC9 395 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 OR2A5Q96R48 311 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 SPRTNQ9H040 489 aaPredicted RBP13.72□□□□□ -0.21
CBWD3-217ENST00000621474 NUDT4Q9NZJ9 180 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 CD274Q9NZQ7 290 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 ZMIZ1Q9ULJ6 1067 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 PLAAQ9Y263 795 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 SSUH2Q9Y2M2 353 aa13.72□□□□□ -0.21
CBWD3-217ENST00000621474 EPG5Q9HCE0 2579 aa13.71□□□□□ -0.21
CBWD3-217ENST00000621474 CCDC88CQ9P219 2028 aa13.71□□□□□ -0.21
CBWD3-217ENST00000621474 SUPT3HB4E1H0 165 aa13.71□□□□□ -0.22
CBWD3-217ENST00000621474 STMND1H3BQB6 276 aa13.71□□□□□ -0.22
CBWD3-217ENST00000621474 SUPT3HO75486 399 aa13.71□□□□□ -0.22
CBWD3-217ENST00000621474 SCRG1O75711 98 aa13.71□□□□□ -0.22
CBWD3-217ENST00000621474 LIPCP11150 499 aa13.71□□□□□ -0.22
CBWD3-217ENST00000621474 EPORP19235 508 aa13.71□□□□□ -0.22
CBWD3-217ENST00000621474 ITGA1P56199 1179 aa13.71□□□□□ -0.22
CBWD3-217ENST00000621474 RELAQ04206 551 aa13.71□□□□□ -0.22
CBWD3-217ENST00000621474 TSNAXIP1Q2TAA8 658 aa13.71□□□□□ -0.22
CBWD3-217ENST00000621474 CATSPEREQ5SY80 951 aa13.71□□□□□ -0.22
CBWD3-217ENST00000621474 BEND6Q5SZJ8 279 aaPredicted RBP13.71□□□□□ -0.22
CBWD3-217ENST00000621474 KLC3Q6P597 504 aa13.71□□□□□ -0.22
CBWD3-217ENST00000621474 C17orf64Q86WR6 236 aa13.71□□□□□ -0.22
CBWD3-217ENST00000621474 PLD3Q8IV08 490 aa13.71□□□□□ -0.22
CBWD3-217ENST00000621474 MCATQ8IVS2 390 aaKnown RBP13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms