RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 OPTCQ9UBM4 332 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 EXTL2Q9UBQ6 330 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 A0A0X1KG70 313 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 I6L893 689 aaPredicted RBP4.92□□□□□ -1.62
VPS13D-214ENST00000620676 TLR4O00206 839 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 CPOXP36551 454 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 SLC11A2P49281 568 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 OC90Q02509 493 aaPredicted RBP4.92□□□□□ -1.62
VPS13D-214ENST00000620676 TARDBPQ13148 414 aaKnown RBP eCLIP4.92□□□□□ -1.622e-6■■■□□ 18.7
VPS13D-214ENST00000620676 SLC26A9Q7LBE3 791 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 LGI4Q8N135 537 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 PCSK9Q8NBP7 692 aaKnown RBP4.92□□□□□ -1.62
VPS13D-214ENST00000620676 LPAR1Q92633 364 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 ELL3Q9HB65 397 aaPredicted RBP4.92□□□□□ -1.62
VPS13D-214ENST00000620676 CCM2LQ9NUG4 571 aaPredicted RBP4.92□□□□□ -1.62
VPS13D-214ENST00000620676 THUMPD1Q9NXG2 353 aaKnown RBP4.92□□□□□ -1.62
VPS13D-214ENST00000620676 PCDHGB3Q9Y5G1 929 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 FER1L4A9Z1Z3 1794 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 PAICSP22234 425 aaKnown RBP4.91□□□□□ -1.62
VPS13D-214ENST00000620676 AKR1C2P52895 323 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 AKR1C1Q04828 323 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 GK2Q14410 553 aaPredicted RBP4.91□□□□□ -1.62
VPS13D-214ENST00000620676 AGAP6Q5VW22 663 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 NLRC3Q7RTR2 1065 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 AGAP4Q96P64 663 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 RSRP1Q9BUV0 290 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 ARHGEF4Q9NR80 690 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 TRBC1P01850 177 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 HEPACAMQ14CZ8 416 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 LRTM1Q9HBL6 345 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 MOCS1Q9NZB8 636 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 FBXO5Q9UKT4 447 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 ERCC6L2Q5T890 1561 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 TEX13CA0A0J9YWL9 993 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 SSX4O60224 188 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 AXLP30530 894 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.91□□□□□ -1.62
VPS13D-214ENST00000620676 CSPG4P5Q96PW8 444 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 WDR77Q9BQA1 342 aaPredicted RBP4.91□□□□□ -1.62
VPS13D-214ENST00000620676 SLITRK2Q9H156 845 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 OSGEPL1Q9H4B0 414 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 ADCY10Q96PN6 1610 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 FAM159BA6NKW6 160 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 MEIS3P2A8K0S8 358 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 SCELO95171 688 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 APLP1P51693 650 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 RAB2AP61019 212 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 CBLBQ13191 982 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 BOP1Q14137 746 aaKnown RBP4.91□□□□□ -1.62
VPS13D-214ENST00000620676 ZNF311Q5JNZ3 666 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 FBXO47Q5MNV8 452 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 STXBP5Q5T5C0 1151 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 OR2T5Q6IEZ7 315 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 MPZL3Q6UWV2 235 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 OR2T29Q8NH02 315 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 UBE2FQ969M7 185 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 C2orf40Q9H1Z8 148 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 CARS2Q9HA77 564 aaKnown RBP4.91□□□□□ -1.62
VPS13D-214ENST00000620676 GFOD1Q9NXC2 390 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 CDH7Q9ULB5 785 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 SREBF1P36956 1147 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 FCRLBQ6BAA4 426 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 KCTD20Q7Z5Y7 419 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 RBPMSQ93062 196 aaKnown RBP4.91□□□□□ -1.62
VPS13D-214ENST00000620676 ELMOD3Q96FG2 381 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 TM9SF2Q99805 663 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 ELOVL4Q9GZR5 314 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 BBIP1A8MTZ0 92 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 F8W036 122 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 FABP7O15540 132 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 CYP2A6P11509 494 aaPredicted RBP4.91□□□□□ -1.62
VPS13D-214ENST00000620676 BLOC1S1P78537 153 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 GRM7Q14831 915 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 NPY5RQ15761 445 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 CNIH2Q6PI25 160 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 OSTM1Q86WC4 334 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 LAX1Q8IWV1 398 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 SDR16C5Q8N3Y7 309 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 IL31RAQ8NI17 732 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 LURAP1Q96LR2 239 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 RIOK2Q9BVS4 552 aaKnown RBP4.91□□□□□ -1.62
VPS13D-214ENST00000620676 MEAF6Q9HAF1 191 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 MIEF1Q9NQG6 463 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 HK1P19367 917 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 GIFP27352 417 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 GRK5P34947 590 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 SLC26A2P50443 739 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 MARC1Q5VT66 337 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 OR6K2Q8NGY2 324 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 TCTEX1D2Q8WW35 142 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 ZNF516Q92618 1163 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 MAL2Q969L2 176 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 LRRC3Q9BY71 257 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 TAS2R13Q9NYV9 303 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 POM121BA6NF01 834 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 LCMT2O60294 686 aaKnown RBP4.91□□□□□ -1.62
VPS13D-214ENST00000620676 FMO6PO60774 539 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 LRCH4O75427 683 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 FABP1P07148 127 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 SYPP08247 313 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms