RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 ATP6V0D1P61421 351 aa10.35□□□□□ -0.75
TARDBP-223ENST00000620632 SNRPNP63162 240 aaKnown RBP10.35□□□□□ -0.75
TARDBP-223ENST00000620632 GPS2Q13227 327 aa10.35□□□□□ -0.75
TARDBP-223ENST00000620632 PTCHD3Q3KNS1 767 aa10.35□□□□□ -0.75
TARDBP-223ENST00000620632 THEMIS2Q5TEJ8 643 aa10.35□□□□□ -0.75
TARDBP-223ENST00000620632 LCN10Q6JVE6 187 aa10.35□□□□□ -0.75
TARDBP-223ENST00000620632 LCTLQ6UWM7 567 aa10.35□□□□□ -0.75
TARDBP-223ENST00000620632 TBC1D1Q86TI0 1168 aaPredicted RBP10.35□□□□□ -0.75
TARDBP-223ENST00000620632 TMEM126BQ8IUX1 230 aa10.35□□□□□ -0.75
TARDBP-223ENST00000620632 PLD3Q8IV08 490 aa10.35□□□□□ -0.75
TARDBP-223ENST00000620632 MCATQ8IVS2 390 aaKnown RBP10.35□□□□□ -0.75
TARDBP-223ENST00000620632 OR4N4Q8N0Y3 316 aa10.35□□□□□ -0.75
TARDBP-223ENST00000620632 DTWD1Q8N5C7 304 aa10.35□□□□□ -0.75
TARDBP-223ENST00000620632 OR2W6PQ8NHA6 318 aa10.35□□□□□ -0.75
TARDBP-223ENST00000620632 HNRNPLLQ8WVV9 542 aaKnown RBP10.35□□□□□ -0.75
TARDBP-223ENST00000620632 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.35□□□□□ -0.75
TARDBP-223ENST00000620632 EXT2Q93063 718 aa10.35□□□□□ -0.75
TARDBP-223ENST00000620632 ZUFSPQ96AP4 578 aa10.35□□□□□ -0.75
TARDBP-223ENST00000620632 ESAMQ96AP7 390 aa10.35□□□□□ -0.75
TARDBP-223ENST00000620632 ZNF285Q96NJ3 590 aa10.35□□□□□ -0.75
TARDBP-223ENST00000620632 RUFY1Q96T51 708 aa10.35□□□□□ -0.75
TARDBP-223ENST00000620632 EGFL8Q99944 293 aa10.35□□□□□ -0.75
TARDBP-223ENST00000620632 TRIM54Q9BYV2 358 aa10.35□□□□□ -0.75
TARDBP-223ENST00000620632 VPS11Q9H270 941 aa10.35□□□□□ -0.75
TARDBP-223ENST00000620632 SPNS1Q9H2V7 528 aa10.35□□□□□ -0.75
TARDBP-223ENST00000620632 RRAGDQ9NQL2 400 aaPredicted RBP10.35□□□□□ -0.75
TARDBP-223ENST00000620632 STARD5Q9NSY2 213 aa10.35□□□□□ -0.75
TARDBP-223ENST00000620632 EURLQ9NYK6 297 aa10.35□□□□□ -0.75
TARDBP-223ENST00000620632 FETUBQ9UGM5 382 aa10.35□□□□□ -0.75
TARDBP-223ENST00000620632 RAB21Q9UL25 225 aa10.35□□□□□ -0.75
TARDBP-223ENST00000620632 PLCL2Q9UPR0 1127 aa10.35□□□□□ -0.75
TARDBP-223ENST00000620632 ACOT9Q9Y305 439 aa10.35□□□□□ -0.75
TARDBP-223ENST00000620632 IKBKGQ9Y6K9 419 aa10.35□□□□□ -0.75
TARDBP-223ENST00000620632 A0A0J9YVX5 310 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 LOC101059948A0A1B0GTJ6 334 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 H7BY64 318 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 UBXN8O00124 270 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 ZNF749O43361 778 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 OR2B3O76000 313 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 KLHL2O95198 593 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 ANXA5P08758 320 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 SNRPAP09012 282 aaKnown RBP10.34□□□□□ -0.75
TARDBP-223ENST00000620632 CDH1P12830 882 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 F8A1P23610 371 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 CNTFP26441 200 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 RORAP35398 523 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 SLC26A3P40879 764 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 SLCO1A2P46721 670 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 SLC6A12P48065 614 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 CSNK1G2P78368 415 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 TAF1BQ53T94 588 aaPredicted RBP10.34□□□□□ -0.75
TARDBP-223ENST00000620632 TECRLQ5HYJ1 363 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 CATSPEREQ5SY80 951 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 ZNF385CQ66K41 422 aaPredicted RBP10.34□□□□□ -0.75
TARDBP-223ENST00000620632 CAPN13Q6MZZ7 669 aaPredicted RBP10.34□□□□□ -0.75
TARDBP-223ENST00000620632 FAM199XQ6PEV8 388 aaPredicted RBP10.34□□□□□ -0.75
TARDBP-223ENST00000620632 C19orf48Q6RUI8 117 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 FRA10AC1Q70Z53 315 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 BPHLQ86WA6 291 aaPredicted RBP10.34□□□□□ -0.75
TARDBP-223ENST00000620632 GPSM1Q86YR5 675 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 KLHDC8AQ8IYD2 350 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 CACNA2D3Q8IZS8 1091 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 NLGN4XQ8N0W4 816 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 CYP4X1Q8N118 509 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 ZNF655Q8N720 491 aaPredicted RBP10.34□□□□□ -0.75
TARDBP-223ENST00000620632 PDPRQ8NCN5 879 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 NLGN4YQ8NFZ3 816 aaPredicted RBP10.34□□□□□ -0.75
TARDBP-223ENST00000620632 OR8K5Q8NH50 307 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 EPS8L3Q8TE67 593 aaKnown RBP10.34□□□□□ -0.75
TARDBP-223ENST00000620632 CAVIN3Q969G5 261 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 NEIL2Q969S2 332 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 TSNARE1Q96NA8 513 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 PRAP1Q96NZ9 151 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 DPH1Q9BZG8 443 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 FANCEQ9HB96 536 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 NMRAL1Q9HBL8 299 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 CPNE5Q9HCH3 593 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 PCMTD2Q9NV79 361 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 ANKMY1Q9P2S6 941 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 RNF112Q9ULX5 631 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 SLC22A14Q9Y267 594 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 PCDHB3Q9Y5E6 796 aa10.34□□□□□ -0.75
TARDBP-223ENST00000620632 CACNA1BQ00975 2339 aa10.33□□□□□ -0.76
TARDBP-223ENST00000620632 NBEAQ8NFP9 2946 aa10.33□□□□□ -0.76
TARDBP-223ENST00000620632 A0A1W2PPM1 405 aa10.33□□□□□ -0.76
TARDBP-223ENST00000620632 PABPN1LA6NDY0 278 aaKnown RBP10.33□□□□□ -0.76
TARDBP-223ENST00000620632 E7EQ34 232 aa10.33□□□□□ -0.76
TARDBP-223ENST00000620632 H0YGG7 62 aa10.33□□□□□ -0.76
TARDBP-223ENST00000620632 TERTO14746 1132 aaKnown RBP10.33□□□□□ -0.76
TARDBP-223ENST00000620632 ZSCAN9O15535 394 aaPredicted RBP10.33□□□□□ -0.76
TARDBP-223ENST00000620632 P2RX6O15547 441 aa10.33□□□□□ -0.76
TARDBP-223ENST00000620632 RRP8O43159 456 aaKnown RBP10.33□□□□□ -0.76
TARDBP-223ENST00000620632 PRAMEF4O60810 478 aa10.33□□□□□ -0.76
TARDBP-223ENST00000620632 KERAO60938 352 aa10.33□□□□□ -0.76
TARDBP-223ENST00000620632 CPNE3O75131 537 aaKnown RBP10.33□□□□□ -0.76
TARDBP-223ENST00000620632 KRT38O76015 456 aa10.33□□□□□ -0.76
TARDBP-223ENST00000620632 WDR47O94967 919 aa10.33□□□□□ -0.76
TARDBP-223ENST00000620632 CCNDBP1O95273 360 aa10.33□□□□□ -0.76
TARDBP-223ENST00000620632 STATHP02808 62 aa10.33□□□□□ -0.76
TARDBP-223ENST00000620632 LIFP15018 202 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms