RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 AQP12BA6NM10 295 aa14.06□□□□□ -0.16
SHROOM1-208ENST00000617339 XPNPEP2O43895 674 aa14.06□□□□□ -0.16
SHROOM1-208ENST00000617339 FZD6O60353 706 aa14.06□□□□□ -0.16
SHROOM1-208ENST00000617339 WISP3O95389 354 aaPredicted RBP14.06□□□□□ -0.16
SHROOM1-208ENST00000617339 MSH3P20585 1137 aa14.06□□□□□ -0.16
SHROOM1-208ENST00000617339 MAT2AP31153 395 aaKnown RBP14.06□□□□□ -0.16
SHROOM1-208ENST00000617339 PPP3CCP48454 512 aa14.06□□□□□ -0.16
SHROOM1-208ENST00000617339 PSMD8P48556 350 aa14.06□□□□□ -0.16
SHROOM1-208ENST00000617339 BLOC1S3Q6QNY0 202 aa14.06□□□□□ -0.16
SHROOM1-208ENST00000617339 PLEKHG7Q6ZR37 379 aa14.06□□□□□ -0.16
SHROOM1-208ENST00000617339 C11orf96Q7Z7L8 435 aa14.06□□□□□ -0.16
SHROOM1-208ENST00000617339 AQP12AQ8IXF9 295 aa14.06□□□□□ -0.16
SHROOM1-208ENST00000617339 FIBINQ8TAL6 211 aa14.06□□□□□ -0.16
SHROOM1-208ENST00000617339 ZNF689Q96CS4 500 aaPredicted RBP14.06□□□□□ -0.16
SHROOM1-208ENST00000617339 FAM83DQ9H4H8 585 aa14.06□□□□□ -0.16
SHROOM1-208ENST00000617339 ANKMY1Q9P2S6 941 aa14.06□□□□□ -0.16
SHROOM1-208ENST00000617339 KLHL3Q9UH77 587 aa14.06□□□□□ -0.16
SHROOM1-208ENST00000617339 MSRAQ9UJ68 235 aa14.06□□□□□ -0.16
SHROOM1-208ENST00000617339 PCDHB3Q9Y5E6 796 aa14.06□□□□□ -0.16
SHROOM1-208ENST00000617339 NOTOA8MTQ0 251 aa14.06□□□□□ -0.16
SHROOM1-208ENST00000617339 TBX1O43435 398 aa14.06□□□□□ -0.16
SHROOM1-208ENST00000617339 MFN2O95140 757 aa14.06□□□□□ -0.16
SHROOM1-208ENST00000617339 CPNE6O95741 557 aa14.06□□□□□ -0.16
SHROOM1-208ENST00000617339 STATHP02808 62 aa14.06□□□□□ -0.16
SHROOM1-208ENST00000617339 MYCLP1P12525 358 aaPredicted RBP14.06□□□□□ -0.16
SHROOM1-208ENST00000617339 TACR1P25103 407 aa14.06□□□□□ -0.16
SHROOM1-208ENST00000617339 SLC6A11P48066 632 aa14.06□□□□□ -0.16
SHROOM1-208ENST00000617339 NAE1Q13564 534 aa14.06□□□□□ -0.16
SHROOM1-208ENST00000617339 AGAP7PQ5VUJ5 663 aa14.06□□□□□ -0.16
SHROOM1-208ENST00000617339 RSBN1Q5VWQ0 802 aaPredicted RBP14.06□□□□□ -0.16
SHROOM1-208ENST00000617339 TPRG1Q6ZUI0 275 aa14.06□□□□□ -0.16
SHROOM1-208ENST00000617339 C8orf59Q8N0T1 100 aaPredicted RBP14.06□□□□□ -0.16
SHROOM1-208ENST00000617339 PDPRQ8NCN5 879 aa14.06□□□□□ -0.16
SHROOM1-208ENST00000617339 LRRC3BQ96PB8 259 aa14.06□□□□□ -0.16
SHROOM1-208ENST00000617339 ZBP1Q9H171 429 aa14.06□□□□□ -0.16
SHROOM1-208ENST00000617339 DDX28Q9NUL7 540 aaKnown RBP14.06□□□□□ -0.16
SHROOM1-208ENST00000617339 ANKRD36A6QL64 1941 aa14.06□□□□□ -0.16
SHROOM1-208ENST00000617339 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 AQP1P29972 269 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 SLC26A3P40879 764 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 DGKGP49619 791 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 IER5LQ5T953 404 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 RAET1GQ6H3X3 334 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 GDPD4Q6W3E5 623 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 TMC8Q8IU68 726 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 P2RY13Q9BPV8 354 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 TOR3AQ9H497 397 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 ACTR3BQ9P1U1 418 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 LIMD1Q9UGP4 676 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 SARDHQ9UL12 918 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 OTCP00480 354 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 ANXA5P08758 320 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 TGM1P22735 817 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 PSMB9P28065 219 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 PDHA2P29803 388 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 MAP2K4P45985 399 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 TRPC1P48995 793 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 CTSCP53634 463 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 NFKB2Q00653 900 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 B4GALNT1Q00973 533 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 CATSPEREQ5SY80 951 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 ALG1LQ6GMV1 187 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 SUSD1Q6UWL2 747 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 Q6ZNB5 142 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 THAP5Q7Z6K1 395 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 OR2A12Q8NGT7 310 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 TMBIM1Q969X1 311 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 ZUFSPQ96AP4 578 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 SCRN2Q96FV2 425 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 TUBA1CQ9BQE3 449 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 GPN2Q9H9Y4 310 aaPredicted RBP14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 SPHK2Q9NRA0 654 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 SDR39U1Q9NRG7 319 aaPredicted RBP14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 UTS2RQ9UKP6 389 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 PCDHGA8Q9Y5G5 932 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 ASNA1O43681 348 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 DIRAS1O95057 198 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 POP4O95707 220 aaKnown RBP14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 FGF4P08620 206 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 ALOX5P09917 674 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 OR56A5P0C7T3 313 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 CEBPBP17676 345 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 PRKACGP22612 351 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 BDKRB1P46663 353 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 NCS1P62166 190 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 MAPKAPK3Q16644 382 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 TTLL9Q3SXZ7 439 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 GLYATQ6IB77 296 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 HTR3DQ70Z44 454 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 PHYKPLQ8IUZ5 450 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 CCDC103Q8IW40 242 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 BIRC7Q96CA5 298 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 DUS3LQ96G46 650 aaKnown RBP14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 OR52E6Q96RD3 313 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 P2RY12Q9H244 342 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 HPS4Q9NQG7 708 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 PLAGL1Q9UM63 463 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 PDE10AQ9Y233 779 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 COL4A6Q14031 1691 aa14.05□□□□□ -0.16
SHROOM1-208ENST00000617339 CHD5Q8TDI0 1954 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms