RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 KRT6AP02538 564 aa13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 KRT6BP04259 564 aa13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 IL7P13232 177 aa13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 POU1F1P28069 291 aa13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 HK3P52790 923 aa13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 NKX3-2P78367 333 aa13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 DDX39BQ13838 428 aaKnown RBP13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 ARHGEF7Q14155 803 aa13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 IRF3Q14653 427 aa13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 GDF6Q6KF10 455 aaPredicted RBP13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 RASAL3Q86YV0 1011 aa13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 FLCNQ8NFG4 579 aa13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 DEDD2Q8WXF8 326 aa13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 MALT1Q9UDY8 824 aa13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 CDK2AP1O14519 115 aa13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 PEX11BO96011 259 aa13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 ZFP36L2P47974 494 aaKnown RBP13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 CPT1AP50416 773 aa13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 TSTA3Q13630 321 aaPredicted RBP13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 NFE2Q16621 373 aaPredicted RBP13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 PRSS48Q7RTY5 328 aa13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 NLRP8Q86W28 1048 aa13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 PJA1Q8NG27 643 aa13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 KIAA1191Q96A73 305 aa13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 RHBDF1Q96CC6 855 aa13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 MYLKQ15746 1914 aa13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 XIRP2A4UGR9 3374 aa13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 C2orf81A6NN90 581 aa13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 M0R082 166 aa13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 CACNG3O60359 315 aa13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 IL18R1Q13478 541 aa13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 ZNF267Q14586 743 aaPredicted RBP13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 BAK1Q16611 211 aa13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 COQ5Q5HYK3 327 aa13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 FAM131AQ6UXB0 335 aa13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 SIMC1Q8NDZ2 872 aa13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 BRSK1Q8TDC3 778 aa13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 CCNB1IP1Q9NPC3 277 aa13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 WWOXQ9NZC7 414 aa13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 PCTPQ9UKL6 214 aa13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 MKLN1Q9UL63 735 aa13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 PCDHB9Q9Y5E1 797 aa13.04□□□□□ -0.32
PCDHA11-202ENST00000616325 ALPIP09923 528 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 TSTQ16762 297 aaKnown RBP13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 RUNDC3AQ59EK9 446 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 C10orf111Q8N326 155 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 ZNF548Q8NEK5 533 aaPredicted RBP13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 MDGA1Q8NFP4 955 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 GPR151Q8TDV0 419 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 GPR63Q9BZJ6 419 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 RAD18Q9NS91 495 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 ABCB8Q9NUT2 735 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 CLCA3PQ9Y6N3 262 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 USP34Q70CQ2 3546 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 TRAV19A0A0A6YYK7 116 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 A0A0G2JMP0 313 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 A0A1W2PQ09 198 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 MROH6A6NGR9 719 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 SLC16A6O15403 523 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 SNX4O95219 450 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 RHOQP17081 205 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 GKP32189 559 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 C9orf131Q5VYM1 1079 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 CPZQ66K79 652 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 OR2T5Q6IEZ7 315 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 TUBA3EQ6PEY2 450 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 TMPRSS11AQ6ZMR5 421 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 LINC00299Q6ZSB3 139 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 CDH24Q86UP0 819 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 GLCCI1Q86VQ1 547 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 DENND1CQ8IV53 801 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 LIX1Q8N485 282 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 FAM109AQ8N4B1 249 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 OR2T29Q8NH02 315 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 LRRC20Q8TCA0 184 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 CHAC2Q8WUX2 184 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 PYURFQ96I23 114 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 KATNAL1Q9BW62 490 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 MRM3Q9HC36 420 aaKnown RBP13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 ATP13A1Q9HD20 1204 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 SLC6A13Q9NSD5 602 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 ZIM2Q9NZV7 527 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 HCSTQ9UBK5 93 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 CLDN24A6NM45 220 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 H3BQ06 376 aaPredicted RBP13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 I3L521 148 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 B4GALT3O60512 393 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 ERN1O75460 977 aaKnown RBP13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 PTHP01270 115 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 PKMP14618 531 aaKnown RBP13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 MAPK12P53778 367 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 ELP6Q0PNE2 266 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 GPAT3Q53EU6 434 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 XKR4Q5GH76 650 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 PDZK1Q5T2W1 519 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 ZNF557Q8N988 423 aaPredicted RBP13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 ST13P5Q8NFI4 369 aaPredicted RBP13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 ENKURQ8TC29 256 aa13.03□□□□□ -0.32
PCDHA11-202ENST00000616325 MTERF3Q96E29 417 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms