RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 ACOXLQ9NUZ1 547 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 ZNF175Q9Y473 711 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 OAS3Q9Y6K5 1087 aaKnown RBP13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 COL1A1P02452 1464 aaPredicted RBP13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 SOX3P41225 446 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 WNT7BP56706 349 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 HMGCS1Q01581 520 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 TTLL4Q14679 1199 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 ZMAT1Q5H9K5 638 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 SPANXN4Q5MJ08 99 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 MAP1SQ66K74 1059 aaPredicted RBP13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 CORO6Q6QEF8 472 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 SH3KBP1Q96B97 665 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 C1QTNF7Q9BXJ2 289 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 ALOXE3Q9BYJ1 711 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 NIT2Q9NQR4 276 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 DNAJC27Q9NZQ0 273 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 OPN1SWP03999 348 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 GLAP06280 429 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 DNAJB13P59910 316 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 ISL1P61371 349 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 ADAM15Q13444 863 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 DUSP6Q16828 381 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 IER5Q5VY09 327 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 ZPBP2Q6X784 338 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 Q6ZPB1 254 aaPredicted RBP13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 ZDHHC17Q8IUH5 632 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 GMCL1P1Q8NEA9 526 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 GANCQ8TET4 914 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 KLHL6Q8WZ60 621 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 WNT8BQ93098 351 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 AP2M1Q96CW1 435 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 ELMOD3Q96FG2 381 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 MASTLQ96GX5 879 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 FAM167AQ96KS9 214 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 ZNF300Q96RE9 604 aaPredicted RBP13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 MNTQ99583 582 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 USB1Q9BQ65 265 aaKnown RBP13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 DUSP16Q9BY84 665 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 CDCP1Q9H5V8 836 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 TLR5O60602 858 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 KHDRBS3O75525 346 aaKnown RBP13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 ICAM1P05362 532 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 HIST1H2AGP0C0S8 130 aaPredicted RBP13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 HIST1H2ADP20671 130 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 RYKP34925 604 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 NOS2P35228 1153 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 HNF1BP35680 557 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 STAT5AP42229 794 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 FOXA1P55317 472 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 DPYSL2Q16555 572 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 ZNF534Q76KX8 674 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 TOMM5Q8N4H5 51 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 RNASE11Q8TAA1 199 aaKnown RBP13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 HIST1H2AHQ96KK5 128 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 HIST1H2AJQ99878 128 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 H2AFJQ9BTM1 129 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 ARHGAP28Q9P2N2 729 aa13.2□□□□□ -0.3
PPP4R3B-205ENST00000616288 MGAT4DA6NG13 374 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 SUPT20HL2P0C7V6 817 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 NRIP1P48552 1158 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 PROX2Q3B8N5 592 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 SUPT20HL1Q3ZLR7 823 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 USP39Q53GS9 565 aaKnown RBP13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 NOMO2Q5JPE7 1267 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 LGI4Q8N135 537 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 PFDN5Q99471 154 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 GPBP1L1Q9HC44 474 aaPredicted RBP13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 BIN3Q9NQY0 253 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 TAS2R7Q9NYW3 318 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 DNMT3BQ9UBC3 853 aaKnown RBP13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 GLS2Q9UI32 602 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 SPATA31A5Q5VU36 1347 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 SPATA31A7Q8IWB4 1347 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 C5P01031 1676 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 HMBSP08397 361 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 ARSBP15848 533 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 EMX2Q04743 252 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 LAMTOR4Q0VGL1 99 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 FCN2Q15485 313 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 AANATQ16613 207 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 TECRLQ5HYJ1 363 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 MARC1Q5VT66 337 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 APOBEC3HQ6NTF7 200 aaKnown RBP13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 ALKAL2Q6UX46 152 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 WASH2PQ6VEQ5 465 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 LARP4Q71RC2 724 aaKnown RBP eCLIP13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 SPNS2Q8IVW8 549 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 LHFPL5Q8TAF8 219 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 CCDC115Q96NT0 180 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 PORCNQ9H237 461 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 TAS2R16Q9NYV7 291 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 EXTL2Q9UBQ6 330 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 KLHL21Q9UJP4 597 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 PKD1L3Q7Z443 1732 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 CILPO75339 1184 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 GGT1P19440 569 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 MAPK1P28482 360 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 GNPDA1P46926 289 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 SOX9P48436 509 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms