RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 C2orf81A6NN90 581 aa6.49□□□□□ -1.37
LMO3-235ENST00000616247 TNFRSF11BO00300 401 aa6.49□□□□□ -1.37
LMO3-235ENST00000616247 IRAK2O43187 625 aa6.49□□□□□ -1.37
LMO3-235ENST00000616247 LZTS3O60299 673 aaPredicted RBP6.49□□□□□ -1.37
LMO3-235ENST00000616247 WBP4O75554 376 aaKnown RBP6.49□□□□□ -1.37
LMO3-235ENST00000616247 RPS3P23396 243 aaKnown RBP eCLIP6.49□□□□□ -1.37
LMO3-235ENST00000616247 CDKN2CP42773 168 aa6.49□□□□□ -1.37
LMO3-235ENST00000616247 POU6F2P78424 691 aaPredicted RBP6.49□□□□□ -1.37
LMO3-235ENST00000616247 SPIBQ01892 262 aa6.49□□□□□ -1.37
LMO3-235ENST00000616247 ZBTB6Q15916 424 aa6.49□□□□□ -1.37
LMO3-235ENST00000616247 PROX2Q3B8N5 592 aa6.49□□□□□ -1.37
LMO3-235ENST00000616247 XKR7Q5GH72 579 aa6.49□□□□□ -1.37
LMO3-235ENST00000616247 TRIQKQ629K1 86 aa6.49□□□□□ -1.37
LMO3-235ENST00000616247 ZNF57Q68EA5 555 aaPredicted RBP6.49□□□□□ -1.37
LMO3-235ENST00000616247 PSAPL1Q6NUJ1 521 aa6.49□□□□□ -1.37
LMO3-235ENST00000616247 MBOAT1Q6ZNC8 495 aa6.49□□□□□ -1.37
LMO3-235ENST00000616247 LINC00299Q6ZSB3 139 aa6.49□□□□□ -1.37
LMO3-235ENST00000616247 SLC46A3Q7Z3Q1 461 aa6.49□□□□□ -1.37
LMO3-235ENST00000616247 BPHLQ86WA6 291 aaPredicted RBP6.49□□□□□ -1.37
LMO3-235ENST00000616247 METTL23Q86XA0 190 aa6.49□□□□□ -1.37
LMO3-235ENST00000616247 PIANPQ8IYJ0 282 aa6.49□□□□□ -1.37
LMO3-235ENST00000616247 RGL4Q8IZJ4 473 aa6.49□□□□□ -1.37
LMO3-235ENST00000616247 FAM109AQ8N4B1 249 aa6.49□□□□□ -1.37
LMO3-235ENST00000616247 CLDN19Q8N6F1 224 aa6.49□□□□□ -1.37
LMO3-235ENST00000616247 SIMC1Q8NDZ2 872 aa6.49□□□□□ -1.37
LMO3-235ENST00000616247 FCGR1BQ92637 280 aa6.49□□□□□ -1.37
LMO3-235ENST00000616247 BHMTQ93088 406 aa6.49□□□□□ -1.37
LMO3-235ENST00000616247 MAL2Q969L2 176 aa6.49□□□□□ -1.37
LMO3-235ENST00000616247 MSANTD3Q96H12 275 aa6.49□□□□□ -1.37
LMO3-235ENST00000616247 PAAF1Q9BRP4 392 aa6.49□□□□□ -1.37
LMO3-235ENST00000616247 CCM2Q9BSQ5 444 aa6.49□□□□□ -1.37
LMO3-235ENST00000616247 POLR1EQ9GZS1 481 aaKnown RBP6.49□□□□□ -1.37
LMO3-235ENST00000616247 SLC22A4Q9H015 551 aa6.49□□□□□ -1.37
LMO3-235ENST00000616247 MROH8Q9H579 483 aa6.49□□□□□ -1.37
LMO3-235ENST00000616247 ELOVL6Q9H5J4 265 aa6.49□□□□□ -1.37
LMO3-235ENST00000616247 ANKHQ9HCJ1 492 aa6.49□□□□□ -1.37
LMO3-235ENST00000616247 OLA1Q9NTK5 396 aaKnown RBP6.49□□□□□ -1.37
LMO3-235ENST00000616247 SIRT5Q9NXA8 310 aa6.49□□□□□ -1.37
LMO3-235ENST00000616247 GPRC5BQ9NZH0 403 aa6.49□□□□□ -1.37
LMO3-235ENST00000616247 COMMD3Q9UBI1 195 aa6.49□□□□□ -1.37
LMO3-235ENST00000616247 PGAP2Q9UHJ9 254 aa6.49□□□□□ -1.37
LMO3-235ENST00000616247 PCDHB5Q9Y5E4 795 aa6.49□□□□□ -1.37
LMO3-235ENST00000616247 UBR3Q6ZT12 1888 aa6.49□□□□□ -1.37
LMO3-235ENST00000616247 PRRC2BQ5JSZ5 2229 aaKnown RBP6.49□□□□□ -1.37
LMO3-235ENST00000616247 PCM1Q15154 2024 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 HMX3A6NHT5 357 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 LOC730098B7Z3J9 87 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 CLIC1O00299 241 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 E2F3O00716 465 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 BNIP3LO60238 219 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 CDRT1O95170 752 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 APOL3O95236 402 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 ADORA3P0DMS8 318 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 ITGAMP11215 1152 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 ENGP17813 658 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 WARSP23381 471 aaKnown RBP6.48□□□□□ -1.37
LMO3-235ENST00000616247 PCSK1P29120 753 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 RPS14P62263 151 aaKnown RBP6.48□□□□□ -1.37
LMO3-235ENST00000616247 HOXC5Q00444 222 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 IHHQ14623 411 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 IRF3Q14653 427 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 ZNF284Q2VY69 593 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 TIMM50Q3ZCQ8 353 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 SPDYE7PQ495Y7 208 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 NADSYN1Q6IA69 706 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 CCSAPQ6IQ19 270 aaPredicted RBP6.48□□□□□ -1.37
LMO3-235ENST00000616247 PTCHD4Q6ZW05 846 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 C16orf62Q7Z3J2 963 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 ZNF467Q7Z7K2 595 aaPredicted RBP6.48□□□□□ -1.37
LMO3-235ENST00000616247 GPR149Q86SP6 731 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 ZNF557Q8N988 423 aaPredicted RBP6.48□□□□□ -1.37
LMO3-235ENST00000616247 SLC7A6Q92536 515 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 ISG20Q96AZ6 181 aaKnown RBP6.48□□□□□ -1.37
LMO3-235ENST00000616247 SLA2Q9H6Q3 261 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 TM9SF3Q9HD45 589 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 TXNRD2Q9NNW7 524 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 ADAMTS5Q9UNA0 930 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 PCDHGB1Q9Y5G3 927 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.48□□□□□ -1.37
LMO3-235ENST00000616247 A0A1W2PQH9 124 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 H3BQ06 376 aaPredicted RBP6.48□□□□□ -1.37
LMO3-235ENST00000616247 HAS3O00219 553 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 ARNTLO00327 626 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 EPN2O95208 641 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 IL6P05231 212 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 BCKDHAP12694 445 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 JUNDP17535 347 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 EDNRBP24530 442 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 LHX1P48742 406 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 FADDQ13158 208 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 GANABQ14697 944 aaKnown RBP6.48□□□□□ -1.37
LMO3-235ENST00000616247 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.48□□□□□ -1.37
LMO3-235ENST00000616247 SUSD1Q6UWL2 747 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 KRT73Q86Y46 540 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 SPATA2LQ8IUW3 424 aaPredicted RBP6.48□□□□□ -1.37
LMO3-235ENST00000616247 CCDC71Q8IV32 467 aaPredicted RBP6.48□□□□□ -1.37
LMO3-235ENST00000616247 MSRB3Q8IXL7 192 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 PGBD5Q8N414 524 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 SLC5A8Q8N695 610 aa6.48□□□□□ -1.37
LMO3-235ENST00000616247 TOP6BLQ8N6T0 577 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms