RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 KRT8P05787 483 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 NR2F6P10588 404 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 NR2F1P10589 423 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 ATP1B2P14415 290 aaPredicted RBP5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 HNMTP50135 292 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 NUDT6P53370 316 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 PLA2G16P53816 162 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 MGAT3Q09327 533 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 MINDY4Q4G0A6 757 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 ATG9BQ674R7 924 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 KLHL35Q6PF15 583 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 TMIGD1Q6UXZ0 262 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 RBM23Q86U06 439 aaKnown RBP5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 HEATR4Q86WZ0 1026 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 ZNF614Q8N883 585 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 PDPRQ8NCN5 879 aa5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 ZNF420Q8TAQ5 688 aaPredicted RBP5.48□□□□□ -1.53
SYNCRIP-204ENST00000616122 H0YAE9 185 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 CCL16O15467 120 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 LAMP1P11279 417 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 ZNF30P17039 623 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 MAGP20916 626 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 LHCGRP22888 699 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 ETV3P41162 512 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 TM4SF4P48230 202 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 SPINT3P49223 89 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 APLP1P51693 650 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 MRPS15P82914 257 aaKnown RBP5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 CAP1Q01518 475 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 SGCGQ13326 291 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 NPTX1Q15818 432 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 TNFAIP8L2Q6P589 184 aaPredicted RBP5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 PSMA8Q8TAA3 256 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 GAB3Q8WWW8 586 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 GLYATL1Q969I3 302 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 TMED5Q9Y3A6 229 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 POLEQ07864 2286 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 A0A0G2JN53 185 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 C1QTNF3-AMACRE9PGA6 284 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 LEFTY2O00292 366 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 EIF3FO00303 357 aaPredicted RBP5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 LEFTY1O75610 366 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 SERPINB7O75635 380 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 RFPL2O75678 378 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 FGF18O76093 207 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 FABP3P05413 133 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 SDC1P18827 310 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 CCR7P32248 378 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 CCR3P51677 355 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 TRIM71Q2Q1W2 868 aaKnown RBP5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 AFMIDQ63HM1 303 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 TYW3Q6IPR3 259 aaKnown RBP5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 GAREM2Q75VX8 874 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 BEND7Q8N7W2 519 aaPredicted RBP5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 OR7G3Q8NG95 312 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 NUDT8Q8WV74 236 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 OR8D1Q8WZ84 308 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 COL26A1Q96A83 441 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 GPATCH1Q9BRR8 931 aaKnown RBP5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 SLC12A9Q9BXP2 914 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 LINC00597Q9H2U6 94 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 SEC14L3Q9UDX4 400 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 ERGIC3Q9Y282 383 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 SLC9A8Q9Y2E8 581 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 MAP4K5Q9Y4K4 846 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 A0A1W2PRB8 838 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 DLGAP3O95886 979 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 CDK4P11802 303 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 RXRGP48443 463 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 BMXP51813 675 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 HEPACAMQ14CZ8 416 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 MED22Q15528 200 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 TCEA2Q15560 299 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 IFI44LQ53G44 452 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 DEPDC1Q5TB30 811 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 VTCN1Q7Z7D3 282 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 REM2Q8IYK8 340 aaPredicted RBP5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 ISOC1Q96CN7 298 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 PPP1R16AQ96I34 528 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 CHCHD6Q9BRQ6 235 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 ZSCAN5AQ9BUG6 496 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 SLC46A2Q9BY10 475 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 ANGPT4Q9Y264 503 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 MED16Q9Y2X0 877 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 A0A1B0GVG6 124 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 SNTNA6NMZ2 147 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 RASAL1O95294 804 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 LATS1O95835 1130 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 RETP07949 1114 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 RPS3P23396 243 aaKnown RBP eCLIP5.47□□□□□ -1.534e-7■■■■□ 21.2
SYNCRIP-204ENST00000616122 IL12AP29459 219 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 HLA-FP30511 346 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 CDK6Q00534 326 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 CREMQ03060 361 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 TMEM115Q12893 351 aaPredicted RBP5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 ARMC4Q5T2S8 1044 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 CYP4Z1Q86W10 505 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 KBTBD8Q8NFY9 601 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 WFDC5Q8TCV5 224 aa5.47□□□□□ -1.53
SYNCRIP-204ENST00000616122 MYLIPQ8WY64 445 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms