RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 RAPGEFL1Q9UHV5 662 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 ADAMDEC1O15204 470 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 SMAD6O43541 496 aaKnown RBP9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 C1GALT1C1LP0DN25 315 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 SAGP10523 405 aaPredicted RBP9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 CD68P34810 354 aaPredicted RBP9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 RPS13P62277 151 aaKnown RBP9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 RPA4Q13156 261 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 ZIK1Q3SY52 487 aaPredicted RBP9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 TIMM50Q3ZCQ8 353 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 FAM98AQ8NCA5 519 aaKnown RBP9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 C7orf57Q8NEG2 295 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 SNRNP27Q8WVK2 155 aaKnown RBP9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 MYDGFQ969H8 173 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 TSACCQ96A04 125 aaPredicted RBP9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 RNFT2Q96EX2 444 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 ZFRQ96KR1 1074 aaKnown RBP9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 ZNF382Q96SR6 550 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 CXCL16Q9H2A7 254 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 MTG2Q9H4K7 406 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 XKR8Q9H6D3 395 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 PDE7BQ9NP56 450 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 UTS2RQ9UKP6 389 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 RNF11Q9Y3C5 154 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 BRWD3Q6RI45 1802 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 OR6C74A6NCV1 312 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 G3V2T6 193 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 PLK4O00444 970 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 ITM2AO43736 263 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 ENTPD5O75356 428 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 REM1O75628 298 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 ALPPP05187 535 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 PRG2P13727 222 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 EFNA1P20827 205 aaPredicted RBP9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 POMZP3Q6PJE2 187 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 FRMD7Q6ZUT3 714 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 AMIGO1Q86WK6 493 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 ARHGAP12Q8IWW6 846 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 NMD3Q96D46 503 aaKnown RBP9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 REXO4Q9GZR2 422 aaKnown RBP9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 KCNH6Q9H252 994 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 ZSCAN32Q9NX65 697 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 MARCH4Q9P2E8 410 aaPredicted RBP9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 STX11O75558 287 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 HOXD9P28356 352 aaPredicted RBP9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 ARSDP51689 593 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 BNIP1Q12981 228 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 DUSP6Q16828 381 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 IFI44LQ53G44 452 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 DCST1Q5T197 706 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 TANGO2Q6ICL3 276 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 KDELC1Q6UW63 502 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 GAREM2Q75VX8 874 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 CHCHD4Q8N4Q1 142 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 ZNF527Q8NB42 609 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 OR10H5Q8NGA6 315 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 ANKRD49Q8WVL7 239 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 SEC14L1Q92503 715 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 JSRP1Q96MG2 331 aaPredicted RBP9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 HHIPQ96QV1 700 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 PREBQ9HCU5 417 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 NEUROD4Q9HD90 331 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 HEBP1Q9NRV9 189 aa9.17□□□□□ -0.94
CLTCL1-208ENST00000615606 H7BY64 318 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 TNFRSF11BO00300 401 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 SHOX2O60902 331 aaPredicted RBP9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 FDXRP22570 491 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 RYKP34925 604 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 SLC6A11P48066 632 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 TRIM71Q2Q1W2 868 aaKnown RBP9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 TNFAIP8L2Q6P589 184 aaPredicted RBP9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 ABRAXAS1Q6UWZ7 409 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 HPS6Q86YV9 775 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 DCP2Q8IU60 420 aaKnown RBP9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 SIX5Q8N196 739 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 ARFGAP1Q8N6T3 406 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 HCAR2Q8TDS4 363 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 NSMCE3Q96MG7 304 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 PRAP1Q96NZ9 151 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 S100A13Q99584 98 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 OR51B5Q9H339 312 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 MS4A12Q9NXJ0 267 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 IL17CQ9P0M4 197 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 ZDHHC2Q9UIJ5 367 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 OR1A2Q9Y585 309 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 IRGMA1A4Y4 181 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 CXCR6O00574 342 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 RPS3P23396 243 aaKnown RBP eCLIP9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 ST13P50502 369 aaKnown RBP9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 PSMD7P51665 324 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 OC90Q02509 493 aaPredicted RBP9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 ASPGQ86U10 573 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 FITM2Q8N6M3 262 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 ZHX1-C8orf76Q96EF9 292 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 DEPDC7Q96QD5 511 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 IL21RQ9HBE5 538 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 CXXC1Q9P0U4 656 aaPredicted RBP9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 IFT80Q9P2H3 777 aaPredicted RBP9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 CAB39Q9Y376 341 aaPredicted RBP9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 TSC22D4Q9Y3Q8 395 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms