RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 CTU2Q2VPK5 515 aaKnown RBP16.02■□□□□ 0.15
CNOT3-208ENST00000613073 CCDC58Q4VC31 144 aa16.02■□□□□ 0.15
CNOT3-208ENST00000613073 ATP6AP1LQ52LC2 224 aa16.02■□□□□ 0.15
CNOT3-208ENST00000613073 RFPL4BQ6ZWI9 263 aa16.02■□□□□ 0.15
CNOT3-208ENST00000613073 SPATC1Q76KD6 591 aa16.02■□□□□ 0.15
CNOT3-208ENST00000613073 MILR1Q7Z6M3 343 aa16.02■□□□□ 0.15
CNOT3-208ENST00000613073 C12orf76Q8N812 135 aaPredicted RBP16.02■□□□□ 0.15
CNOT3-208ENST00000613073 OR7G1Q8NGA0 311 aa16.02■□□□□ 0.15
CNOT3-208ENST00000613073 ITFG1Q8TB96 612 aa16.02■□□□□ 0.15
CNOT3-208ENST00000613073 ROPN1LQ96C74 230 aa16.02■□□□□ 0.15
CNOT3-208ENST00000613073 LRRC58Q96CX6 371 aa16.02■□□□□ 0.15
CNOT3-208ENST00000613073 PPIL1Q9Y3C6 166 aa16.02■□□□□ 0.15
CNOT3-208ENST00000613073 PCDHGA11Q9Y5H2 935 aa16.02■□□□□ 0.15
CNOT3-208ENST00000613073 KRT87PA6NCN2 255 aa16.01■□□□□ 0.15
CNOT3-208ENST00000613073 THRBP10828 461 aa16.01■□□□□ 0.15
CNOT3-208ENST00000613073 FCGR1AP12314 374 aa16.01■□□□□ 0.15
CNOT3-208ENST00000613073 PIGAP37287 484 aa16.01■□□□□ 0.15
CNOT3-208ENST00000613073 ABRAXAS2Q15018 415 aa16.01■□□□□ 0.15
CNOT3-208ENST00000613073 TCEAL5Q5H9L2 206 aa16.01■□□□□ 0.15
CNOT3-208ENST00000613073 PRSS36Q5K4E3 855 aa16.01■□□□□ 0.15
CNOT3-208ENST00000613073 BLOC1S3Q6QNY0 202 aa16.01■□□□□ 0.15
CNOT3-208ENST00000613073 CCDC103Q8IW40 242 aa16.01■□□□□ 0.15
CNOT3-208ENST00000613073 SLC22A15Q8IZD6 547 aa16.01■□□□□ 0.15
CNOT3-208ENST00000613073 ITCHQ96J02 903 aa16.01■□□□□ 0.15
CNOT3-208ENST00000613073 HPS4Q9NQG7 708 aa16.01■□□□□ 0.15
CNOT3-208ENST00000613073 DDX28Q9NUL7 540 aaKnown RBP16.01■□□□□ 0.15
CNOT3-208ENST00000613073 AIG1Q9NVV5 245 aa16.01■□□□□ 0.15
CNOT3-208ENST00000613073 SLAMF8Q9P0V8 285 aa16.01■□□□□ 0.15
CNOT3-208ENST00000613073 UGT2A1Q9Y4X1 527 aa16.01■□□□□ 0.15
CNOT3-208ENST00000613073 FGF19O95750 216 aa16.01■□□□□ 0.15
CNOT3-208ENST00000613073 GPIP06744 558 aa16.01■□□□□ 0.15
CNOT3-208ENST00000613073 MAP2K4P45985 399 aa16.01■□□□□ 0.15
CNOT3-208ENST00000613073 LIPEQ05469 1076 aa16.01■□□□□ 0.15
CNOT3-208ENST00000613073 BNIP2Q12982 314 aa16.01■□□□□ 0.15
CNOT3-208ENST00000613073 BOP1Q14137 746 aaKnown RBP16.01■□□□□ 0.15
CNOT3-208ENST00000613073 AAK1Q2M2I8 961 aa16.01■□□□□ 0.15
CNOT3-208ENST00000613073 PLA2G4EQ3MJ16 856 aa16.01■□□□□ 0.15
CNOT3-208ENST00000613073 ZNF648Q5T619 568 aaPredicted RBP16.01■□□□□ 0.15
CNOT3-208ENST00000613073 Q6ZVL8 140 aa16.01■□□□□ 0.15
CNOT3-208ENST00000613073 EFL1Q7Z2Z2 1120 aaKnown RBP16.01■□□□□ 0.15
CNOT3-208ENST00000613073 HSD11B1LQ7Z5J1 315 aa16.01■□□□□ 0.15
CNOT3-208ENST00000613073 SPATA19Q7Z5L4 167 aa16.01■□□□□ 0.15
CNOT3-208ENST00000613073 OR6Q1Q8NGQ2 317 aa16.01■□□□□ 0.15
CNOT3-208ENST00000613073 TMBIM1Q969X1 311 aa16.01■□□□□ 0.15
CNOT3-208ENST00000613073 RHBDF1Q96CC6 855 aa16.01■□□□□ 0.15
CNOT3-208ENST00000613073 PRDM8Q9NQV8 689 aa16.01■□□□□ 0.15
CNOT3-208ENST00000613073 ABCD2Q9UBJ2 740 aa16.01■□□□□ 0.15
CNOT3-208ENST00000613073 OPTCQ9UBM4 332 aa16.01■□□□□ 0.15
CNOT3-208ENST00000613073 MRPS23Q9Y3D9 190 aaKnown RBP16.01■□□□□ 0.15
CNOT3-208ENST00000613073 ZNF106Q9H2Y7 1883 aaKnown RBP16.01■□□□□ 0.15
CNOT3-208ENST00000613073 A8MV72 311 aaPredicted RBP16■□□□□ 0.15
CNOT3-208ENST00000613073 GRXCR1A8MXD5 290 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 HOXC11O43248 304 aaPredicted RBP16■□□□□ 0.15
CNOT3-208ENST00000613073 MATN4O95460 622 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 C7P10643 843 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 GTF2E2P29084 291 aaKnown RBP16■□□□□ 0.15
CNOT3-208ENST00000613073 ETV3P41162 512 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 LBX1P52954 281 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 POLR2LP62875 67 aaKnown RBP16■□□□□ 0.15
CNOT3-208ENST00000613073 ERVK-8P63133 956 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 VAC14Q08AM6 782 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 TRAF3Q13114 568 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 NFYCQ13952 458 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 NR6A1Q15406 480 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 DGUOKQ16854 277 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 TTLL9Q3SXZ7 439 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 SGO1Q5FBB7 561 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 COLEC12Q5KU26 742 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 C6orf141Q5SZD1 244 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 DESI1Q6ICB0 168 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 SERPINA13PQ6UXR4 307 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 GATAD2AQ86YP4 633 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 CHDHQ8NE62 594 aaPredicted RBP16■□□□□ 0.15
CNOT3-208ENST00000613073 FIG4Q92562 907 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 RPL3LQ92901 407 aaKnown RBP16■□□□□ 0.15
CNOT3-208ENST00000613073 MUL1Q969V5 352 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 FARSBQ9NSD9 589 aaKnown RBP16■□□□□ 0.15
CNOT3-208ENST00000613073 PAK1IP1Q9NWT1 392 aaPredicted RBP16■□□□□ 0.15
CNOT3-208ENST00000613073 MOSPD1Q9UJG1 213 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 C16orf96A6NNT2 1141 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 BBIP1A8MTZ0 92 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 CCRL2O00421 344 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 SLC22A3O75751 556 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 CCNKO75909 580 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 OTCP00480 354 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 CTSLP07711 333 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 HSD17B1P14061 328 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 VIPR2P41587 438 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 KCNK10P57789 538 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 CD47Q08722 323 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 LAPTM5Q13571 262 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 HACD2Q6Y1H2 254 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 VRK3Q8IV63 474 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 TBC1D21Q8IYX1 336 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 C7orf61Q8IZ16 206 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 BEND7Q8N7W2 519 aaPredicted RBP16■□□□□ 0.15
CNOT3-208ENST00000613073 FAM83FQ8NEG4 500 aaPredicted RBP16■□□□□ 0.15
CNOT3-208ENST00000613073 FRS2Q8WU20 508 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 BIRC7Q96CA5 298 aa16■□□□□ 0.15
CNOT3-208ENST00000613073 TXNDC15Q96J42 360 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms