RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 GALK1P51570 392 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 TPD52P55327 224 aaPredicted RBP13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 ESRRGP62508 458 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 POLR2LP62875 67 aaKnown RBP13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 ZNF77Q15935 545 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 CCNYL2Q5T2Q4 361 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 LRIF1Q5T3J3 769 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 PRR23BQ6ZRT6 265 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 PARP8Q8N3A8 854 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 C1orf52Q8N6N3 182 aaKnown RBP13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 BPIFB6Q8NFQ5 453 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 CNIH3Q8TBE1 160 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 ASZ1Q8WWH4 475 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 GAB3Q8WWW8 586 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 AP2M1Q96CW1 435 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 COG8Q96MW5 612 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 RHNO1Q9BSD3 238 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 ASIC5Q9NY37 505 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 PCYT1BQ9Y5K3 369 aaPredicted RBP13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 OTOL1A6NHN0 477 aaPredicted RBP13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 PTGES3LE9PB15 166 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 ERN1O75460 977 aaKnown RBP13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 MAP4P27816 1152 aaKnown RBP13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 IMPA1P29218 277 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 EPHA2P29317 976 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 CTNNB1P35222 781 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 SIM2Q14190 667 aaPredicted RBP13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 PLEKHS1Q5SXH7 462 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 ELMSAN1Q6PJG2 1045 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 EZH1Q92800 747 aaPredicted RBP13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 EMILIN2Q9BXX0 1053 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 CEP44Q9C0F1 390 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 CRISPLD2Q9H0B8 497 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 SGK2Q9HBY8 427 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 IL36AQ9UHA7 158 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 ATG2BQ96BY7 2078 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 FAM220BPB1ANY3 271 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 CLIC1O00299 241 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 XPNPEP2O43895 674 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 SCN2BO60939 215 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 SCELO95171 688 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 HTR1AP08908 422 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 ELFN1P0C7U0 828 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 MPC1LP0DKB6 136 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 MYOGP15173 224 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 SLC6A11P48066 632 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 ENTPD1P49961 510 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 PTPN5P54829 565 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 CD47Q08722 323 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 TMEM115Q12893 351 aaPredicted RBP13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 BRAT1Q6PJG6 821 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 LIPIQ6XZB0 460 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 TMPRSS11BQ86T26 416 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 MRPL43Q8N983 215 aaKnown RBP13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 WDR20Q8TBZ3 569 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 NEIL2Q969S2 332 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 TMEM159Q96B96 161 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 SDCCAG3Q96C92 435 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 TMEFF2Q9UIK5 374 aaPredicted RBP13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 PLAGL1Q9UM63 463 aa13.63□□□□□ -0.23
PCDHGA3-202ENST00000612467 DOCK9Q9BZ29 2069 aa13.62□□□□□ -0.23
PCDHGA3-202ENST00000612467 LRRK1Q38SD2 2015 aa13.62□□□□□ -0.23
PCDHGA3-202ENST00000612467 MAGEB3O15480 346 aa13.62□□□□□ -0.23
PCDHGA3-202ENST00000612467 PRPS2P11908 318 aa13.62□□□□□ -0.23
PCDHGA3-202ENST00000612467 ACPPP15309 386 aa13.62□□□□□ -0.23
PCDHGA3-202ENST00000612467 TNFRSF1BP20333 461 aa13.62□□□□□ -0.23
PCDHGA3-202ENST00000612467 HNMTP50135 292 aa13.62□□□□□ -0.23
PCDHGA3-202ENST00000612467 RAE1P78406 368 aaKnown RBP13.62□□□□□ -0.23
PCDHGA3-202ENST00000612467 VLDLRP98155 873 aa13.62□□□□□ -0.23
PCDHGA3-202ENST00000612467 GGTA1PQ4G0N0 100 aa13.62□□□□□ -0.23
PCDHGA3-202ENST00000612467 ATG9BQ674R7 924 aa13.62□□□□□ -0.23
PCDHGA3-202ENST00000612467 CYP4Z1Q86W10 505 aa13.62□□□□□ -0.23
PCDHGA3-202ENST00000612467 ERI1Q8IV48 349 aaKnown RBP13.62□□□□□ -0.23
PCDHGA3-202ENST00000612467 ZDHHC21Q8IVQ6 265 aa13.62□□□□□ -0.23
PCDHGA3-202ENST00000612467 BTN2A2Q8WVV5 523 aa13.62□□□□□ -0.23
PCDHGA3-202ENST00000612467 GLYATL1Q969I3 302 aa13.62□□□□□ -0.23
PCDHGA3-202ENST00000612467 PYURFQ96I23 114 aa13.62□□□□□ -0.23
PCDHGA3-202ENST00000612467 DGCR6LQ9BY27 220 aa13.62□□□□□ -0.23
PCDHGA3-202ENST00000612467 SPNS1Q9H2V7 528 aa13.62□□□□□ -0.23
PCDHGA3-202ENST00000612467 AASDHPPTQ9NRN7 309 aa13.62□□□□□ -0.23
PCDHGA3-202ENST00000612467 PAK1IP1Q9NWT1 392 aaPredicted RBP13.62□□□□□ -0.23
PCDHGA3-202ENST00000612467 VPS29Q9UBQ0 182 aa13.62□□□□□ -0.23
PCDHGA3-202ENST00000612467 MAN2B2Q9Y2E5 1009 aa13.62□□□□□ -0.23
PCDHGA3-202ENST00000612467 PCM1Q15154 2024 aa13.62□□□□□ -0.23
PCDHGA3-202ENST00000612467 TRANK1O15050 2925 aa13.62□□□□□ -0.23
PCDHGA3-202ENST00000612467 PRRT4C9JH25 899 aa13.62□□□□□ -0.23
PCDHGA3-202ENST00000612467 CFAP99D6REC4 459 aa13.62□□□□□ -0.23
PCDHGA3-202ENST00000612467 NPC1O15118 1278 aa13.62□□□□□ -0.23
PCDHGA3-202ENST00000612467 SPINT1O43278 529 aa13.62□□□□□ -0.23
PCDHGA3-202ENST00000612467 SLCO2B1O94956 709 aa13.62□□□□□ -0.23
PCDHGA3-202ENST00000612467 FTH1P02794 183 aa13.62□□□□□ -0.23
PCDHGA3-202ENST00000612467 GSTM1P09488 218 aa13.62□□□□□ -0.23
PCDHGA3-202ENST00000612467 CYP2A6P11509 494 aaPredicted RBP13.62□□□□□ -0.23
PCDHGA3-202ENST00000612467 PTPN2P17706 415 aa13.62□□□□□ -0.23
PCDHGA3-202ENST00000612467 RANBP1P43487 201 aa13.62□□□□□ -0.23
PCDHGA3-202ENST00000612467 GSSP48637 474 aa13.62□□□□□ -0.23
PCDHGA3-202ENST00000612467 HLCSP50747 726 aa13.62□□□□□ -0.23
PCDHGA3-202ENST00000612467 EMP3P54852 163 aa13.62□□□□□ -0.23
PCDHGA3-202ENST00000612467 RPS13P62277 151 aaKnown RBP13.62□□□□□ -0.23
PCDHGA3-202ENST00000612467 HPCAP84074 193 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms