RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 CYHR1Q6ZMK1 362 aa11.81□□□□□ -0.52
CBWD3-208ENST00000612050 C3orf62Q6ZUJ4 267 aa11.81□□□□□ -0.52
CBWD3-208ENST00000612050 RNF44Q7L0R7 432 aa11.81□□□□□ -0.52
CBWD3-208ENST00000612050 ZNF572Q7Z3I7 529 aaPredicted RBP11.81□□□□□ -0.52
CBWD3-208ENST00000612050 C17orf64Q86WR6 236 aa11.81□□□□□ -0.52
CBWD3-208ENST00000612050 APLFQ8IW19 511 aaPredicted RBP11.81□□□□□ -0.52
CBWD3-208ENST00000612050 CTAGE3PQ8IX95 158 aa11.81□□□□□ -0.52
CBWD3-208ENST00000612050 EFCAB3Q8N7B9 438 aa11.81□□□□□ -0.52
CBWD3-208ENST00000612050 TMEM102Q8N9M5 508 aaPredicted RBP11.81□□□□□ -0.52
CBWD3-208ENST00000612050 PPFIBP2Q8ND30 876 aa11.81□□□□□ -0.52
CBWD3-208ENST00000612050 COL26A1Q96A83 441 aa11.81□□□□□ -0.52
CBWD3-208ENST00000612050 PTERQ96BW5 349 aa11.81□□□□□ -0.52
CBWD3-208ENST00000612050 GBP5Q96PP8 586 aa11.81□□□□□ -0.52
CBWD3-208ENST00000612050 CPNE1Q99829 537 aa11.81□□□□□ -0.52
CBWD3-208ENST00000612050 FAM129AQ9BZQ8 928 aa11.81□□□□□ -0.52
CBWD3-208ENST00000612050 RHOJQ9H4E5 214 aa11.81□□□□□ -0.52
CBWD3-208ENST00000612050 POPDC3Q9HBV1 291 aa11.81□□□□□ -0.52
CBWD3-208ENST00000612050 MOCS1Q9NZB8 636 aa11.81□□□□□ -0.52
CBWD3-208ENST00000612050 STOX2Q9P2F5 926 aaPredicted RBP11.81□□□□□ -0.52
CBWD3-208ENST00000612050 TLK1Q9UKI8 766 aa11.81□□□□□ -0.52
CBWD3-208ENST00000612050 MED16Q9Y2X0 877 aa11.81□□□□□ -0.52
CBWD3-208ENST00000612050 NBEAQ8NFP9 2946 aa11.81□□□□□ -0.52
CBWD3-208ENST00000612050 A0A1W2PPV9 198 aa11.8□□□□□ -0.52
CBWD3-208ENST00000612050 OR2A25A4D2G3 310 aa11.8□□□□□ -0.52
CBWD3-208ENST00000612050 KRT87PA6NCN2 255 aa11.8□□□□□ -0.52
CBWD3-208ENST00000612050 ARGFXA6NJG6 315 aa11.8□□□□□ -0.52
CBWD3-208ENST00000612050 SLC28A2O43868 658 aa11.8□□□□□ -0.52
CBWD3-208ENST00000612050 ALBP02768 609 aa11.8□□□□□ -0.52
CBWD3-208ENST00000612050 GABRB3P28472 473 aa11.8□□□□□ -0.52
CBWD3-208ENST00000612050 IMPA1P29218 277 aa11.8□□□□□ -0.52
CBWD3-208ENST00000612050 PHBP35232 272 aa11.8□□□□□ -0.52
CBWD3-208ENST00000612050 EMP3P54852 163 aa11.8□□□□□ -0.52
CBWD3-208ENST00000612050 RPS15AP62244 130 aaKnown RBP11.8□□□□□ -0.52
CBWD3-208ENST00000612050 TBPL1P62380 186 aa11.8□□□□□ -0.52
CBWD3-208ENST00000612050 MRPS25P82663 173 aaKnown RBP11.8□□□□□ -0.52
CBWD3-208ENST00000612050 POU4F1Q01851 419 aa11.8□□□□□ -0.52
CBWD3-208ENST00000612050 RELAQ04206 551 aa11.8□□□□□ -0.52
CBWD3-208ENST00000612050 CBLBQ13191 982 aa11.8□□□□□ -0.52
CBWD3-208ENST00000612050 FASTKD3Q14CZ7 662 aaKnown RBP11.8□□□□□ -0.52
CBWD3-208ENST00000612050 IRAK1BP1Q5VVH5 260 aa11.8□□□□□ -0.52
CBWD3-208ENST00000612050 GARNL3Q5VVW2 1013 aa11.8□□□□□ -0.52
CBWD3-208ENST00000612050 AGTRAPQ6RW13 159 aa11.8□□□□□ -0.52
CBWD3-208ENST00000612050 ATG14Q6ZNE5 492 aa11.8□□□□□ -0.52
CBWD3-208ENST00000612050 ZC3HC1Q86WB0 502 aaKnown RBP11.8□□□□□ -0.52
CBWD3-208ENST00000612050 CSNK1A1LQ8N752 337 aa11.8□□□□□ -0.52
CBWD3-208ENST00000612050 CLEC1AQ8NC01 280 aa11.8□□□□□ -0.52
CBWD3-208ENST00000612050 KIF18AQ8NI77 898 aa11.8□□□□□ -0.52
CBWD3-208ENST00000612050 ANKRD7Q92527 254 aa11.8□□□□□ -0.52
CBWD3-208ENST00000612050 NACC2Q96BF6 587 aa11.8□□□□□ -0.52
CBWD3-208ENST00000612050 MVB12AQ96EY5 273 aa11.8□□□□□ -0.52
CBWD3-208ENST00000612050 EGFL8Q99944 293 aa11.8□□□□□ -0.52
CBWD3-208ENST00000612050 AKIRIN1Q9H9L7 192 aaPredicted RBP11.8□□□□□ -0.52
CBWD3-208ENST00000612050 GPAMQ9HCL2 828 aa11.8□□□□□ -0.52
CBWD3-208ENST00000612050 ZNF304Q9HCX3 659 aa11.8□□□□□ -0.52
CBWD3-208ENST00000612050 STARD5Q9NSY2 213 aa11.8□□□□□ -0.52
CBWD3-208ENST00000612050 TMEM184CQ9NVA4 438 aa11.8□□□□□ -0.52
CBWD3-208ENST00000612050 PDE10AQ9Y233 779 aa11.8□□□□□ -0.52
CBWD3-208ENST00000612050 SNRNP200O75643 2136 aaKnown RBP11.8□□□□□ -0.52
CBWD3-208ENST00000612050 ZFHX4Q86UP3 3567 aa11.79□□□□□ -0.52
CBWD3-208ENST00000612050 CTAGE15A4D2H0 777 aa11.79□□□□□ -0.52
CBWD3-208ENST00000612050 FITM1A5D6W6 292 aa11.79□□□□□ -0.52
CBWD3-208ENST00000612050 FANCGO15287 622 aa11.79□□□□□ -0.52
CBWD3-208ENST00000612050 CTSVO60911 334 aa11.79□□□□□ -0.52
CBWD3-208ENST00000612050 CTAGE8P0CG41 777 aa11.79□□□□□ -0.52
CBWD3-208ENST00000612050 STMN1P16949 149 aa11.79□□□□□ -0.52
CBWD3-208ENST00000612050 ZNF37AP17032 561 aaPredicted RBP11.79□□□□□ -0.52
CBWD3-208ENST00000612050 SSTR1P30872 391 aa11.79□□□□□ -0.52
CBWD3-208ENST00000612050 SPRP35270 261 aaPredicted RBP11.79□□□□□ -0.52
CBWD3-208ENST00000612050 GP5P40197 560 aa11.79□□□□□ -0.52
CBWD3-208ENST00000612050 SKP1P63208 163 aa11.79□□□□□ -0.52
CBWD3-208ENST00000612050 NAB1Q13506 487 aa11.79□□□□□ -0.52
CBWD3-208ENST00000612050 IL10RAQ13651 578 aa11.79□□□□□ -0.52
CBWD3-208ENST00000612050 USP10Q14694 798 aaKnown RBP11.79□□□□□ -0.52
CBWD3-208ENST00000612050 SLC9A5Q14940 896 aa11.79□□□□□ -0.52
CBWD3-208ENST00000612050 CYS1Q717R9 158 aa11.79□□□□□ -0.52
CBWD3-208ENST00000612050 ADAMTSL2Q86TH1 951 aa11.79□□□□□ -0.52
CBWD3-208ENST00000612050 CTAGE6Q86UF2 777 aa11.79□□□□□ -0.52
CBWD3-208ENST00000612050 CTAGE4Q8IX94 777 aa11.79□□□□□ -0.52
CBWD3-208ENST00000612050 TEX19Q8NA77 164 aa11.79□□□□□ -0.52
CBWD3-208ENST00000612050 OR2Y1Q8NGV0 311 aa11.79□□□□□ -0.52
CBWD3-208ENST00000612050 THAP11Q96EK4 314 aa11.79□□□□□ -0.52
CBWD3-208ENST00000612050 ABHD17AQ96GS6 310 aa11.79□□□□□ -0.52
CBWD3-208ENST00000612050 PDLIM5Q96HC4 596 aaKnown RBP11.79□□□□□ -0.52
CBWD3-208ENST00000612050 RUFY1Q96T51 708 aa11.79□□□□□ -0.52
CBWD3-208ENST00000612050 SLC25A23Q9BV35 468 aa11.79□□□□□ -0.52
CBWD3-208ENST00000612050 YIPF2Q9BWQ6 316 aa11.79□□□□□ -0.52
CBWD3-208ENST00000612050 SEMA4CQ9C0C4 833 aa11.79□□□□□ -0.52
CBWD3-208ENST00000612050 ING2Q9H160 280 aa11.79□□□□□ -0.52
CBWD3-208ENST00000612050 WDR54Q9H977 334 aa11.79□□□□□ -0.52
CBWD3-208ENST00000612050 SLC6A20Q9NP91 592 aa11.79□□□□□ -0.52
CBWD3-208ENST00000612050 SLC17A6Q9P2U8 582 aa11.79□□□□□ -0.52
CBWD3-208ENST00000612050 ANAPC2Q9UJX6 822 aa11.79□□□□□ -0.52
CBWD3-208ENST00000612050 NOVA2Q9UNW9 492 aaKnown RBP11.79□□□□□ -0.52
CBWD3-208ENST00000612050 DYRK1BQ9Y463 629 aa11.79□□□□□ -0.52
CBWD3-208ENST00000612050 H0YGG7 62 aa11.78□□□□□ -0.52
CBWD3-208ENST00000612050 H3BMH7 237 aa11.78□□□□□ -0.52
CBWD3-208ENST00000612050 HCRTR1O43613 425 aa11.78□□□□□ -0.52
CBWD3-208ENST00000612050 C1QL1O75973 258 aa11.78□□□□□ -0.52
CBWD3-208ENST00000612050 GUCA1CO95843 209 aa11.78□□□□□ -0.52
CBWD3-208ENST00000612050 S100BP04271 92 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms