RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 RAD51AP1Q96B01 352 aa6.89□□□□□ -1.31
CBWD1-219ENST00000611457 MAGEB18Q96M61 343 aa6.89□□□□□ -1.31
CBWD1-219ENST00000611457 TUBB6Q9BUF5 446 aa6.89□□□□□ -1.31
CBWD1-219ENST00000611457 TBC1D10AQ9BXI6 508 aa6.89□□□□□ -1.31
CBWD1-219ENST00000611457 RHOJQ9H4E5 214 aa6.89□□□□□ -1.31
CBWD1-219ENST00000611457 ANAPC2Q9UJX6 822 aa6.89□□□□□ -1.31
CBWD1-219ENST00000611457 PAIP2BQ9ULR5 123 aaKnown RBP6.89□□□□□ -1.31
CBWD1-219ENST00000611457 ZNF232Q9UNY5 417 aa6.89□□□□□ -1.31
CBWD1-219ENST00000611457 TRBC2A0A5B9 178 aa6.89□□□□□ -1.31
CBWD1-219ENST00000611457 PMPCBO75439 489 aa6.89□□□□□ -1.31
CBWD1-219ENST00000611457 VIPP01282 170 aa6.89□□□□□ -1.31
CBWD1-219ENST00000611457 JUPP14923 745 aa6.89□□□□□ -1.31
CBWD1-219ENST00000611457 PTPN4P29074 926 aa6.89□□□□□ -1.31
CBWD1-219ENST00000611457 MRPL19P49406 292 aaKnown RBP6.89□□□□□ -1.31
CBWD1-219ENST00000611457 C21orf58P58505 322 aa6.89□□□□□ -1.31
CBWD1-219ENST00000611457 RPS15AP62244 130 aaKnown RBP6.89□□□□□ -1.31
CBWD1-219ENST00000611457 IL9RQ01113 521 aa6.89□□□□□ -1.31
CBWD1-219ENST00000611457 GRTP1Q5TC63 336 aa6.89□□□□□ -1.31
CBWD1-219ENST00000611457 TMEM164Q5U3C3 297 aa6.89□□□□□ -1.31
CBWD1-219ENST00000611457 AADACL2Q6P093 401 aa6.89□□□□□ -1.31
CBWD1-219ENST00000611457 FAM129CQ86XR2 697 aa6.89□□□□□ -1.31
CBWD1-219ENST00000611457 ANKRD42Q8N9B4 389 aa6.89□□□□□ -1.31
CBWD1-219ENST00000611457 FAM46DQ8NEK8 389 aa6.89□□□□□ -1.31
CBWD1-219ENST00000611457 TTLQ8NG68 377 aa6.89□□□□□ -1.31
CBWD1-219ENST00000611457 OR8K3Q8NH51 312 aa6.89□□□□□ -1.31
CBWD1-219ENST00000611457 SMPDL3AQ92484 453 aa6.89□□□□□ -1.31
CBWD1-219ENST00000611457 QRFPRQ96P65 431 aa6.89□□□□□ -1.31
CBWD1-219ENST00000611457 SAE1Q9UBE0 346 aaPredicted RBP6.89□□□□□ -1.31
CBWD1-219ENST00000611457 CRLS1Q9UJA2 301 aa6.89□□□□□ -1.31
CBWD1-219ENST00000611457 ADAM29Q9UKF5 820 aa6.89□□□□□ -1.31
CBWD1-219ENST00000611457 HPP00738 406 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 HNRNPFP52597 415 aaKnown RBP6.88□□□□□ -1.31
CBWD1-219ENST00000611457 ITGA1P56199 1179 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 MGAT5Q09328 741 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 TBR1Q16650 682 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 EXOC3L1Q86VI1 746 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 ST13P4Q8IZP2 240 aaPredicted RBP6.88□□□□□ -1.31
CBWD1-219ENST00000611457 USP7Q93009 1102 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 SLC38A3Q99624 504 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 TRIM51Q9BSJ1 452 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 SLC6A16Q9GZN6 736 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 NDUFA13Q9P0J0 144 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 FOXJ2Q9P0K8 574 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 HAO1Q9UJM8 370 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 WBP11Q9Y2W2 641 aaKnown RBP6.88□□□□□ -1.31
CBWD1-219ENST00000611457 TTC28Q96AY4 2481 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 ARHGEF17Q96PE2 2063 aaPredicted RBP6.88□□□□□ -1.31
CBWD1-219ENST00000611457 A0A087X1B8 175 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 UGT1A4P22310 534 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 UGT1A3P35503 534 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 RPL21P46778 160 aaKnown RBP6.88□□□□□ -1.31
CBWD1-219ENST00000611457 ARL4CP56559 192 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 SLC34A1Q06495 639 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 TBL3Q12788 808 aaKnown RBP6.88□□□□□ -1.31
CBWD1-219ENST00000611457 CDC16Q13042 620 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 TMED1Q13445 227 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 LAPTM5Q13571 262 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 CNPY1Q3B7I2 92 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 ATG9BQ674R7 924 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 RIPOR1Q6ZS17 1223 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 LRRC70Q7Z2Q7 622 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 B3GNT8Q7Z7M8 397 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 LINC01555Q8NAE3 123 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 OR2A1Q8NGT9 310 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 EPS8L3Q8TE67 593 aaKnown RBP6.88□□□□□ -1.31
CBWD1-219ENST00000611457 NCSTNQ92542 709 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 UTP4Q969X6 686 aaKnown RBP6.88□□□□□ -1.31
CBWD1-219ENST00000611457 CERS2Q96G23 380 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 NUDT22Q9BRQ3 303 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 HHATLQ9HCP6 504 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 PRDM8Q9NQV8 689 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 RAB6BQ9NRW1 208 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 SNX7Q9UNH6 387 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 TMEM98Q9Y2Y6 226 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 SNX24Q9Y343 169 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 PCNX2A6NKB5 2137 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 IGKV3D-11A0A0A0MRZ8 115 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 TTC24A2A3L6 582 aaPredicted RBP6.88□□□□□ -1.31
CBWD1-219ENST00000611457 PIPSLA2A3N6 862 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 GOLGA8TH3BQL2 631 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 STX16-NPEPL1H3BU86 382 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 BTN3A3O00478 584 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 STX16O14662 325 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 ENTPD5O75356 428 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 TFEBP19484 476 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 NMBRP28336 390 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 LSAMPQ13449 338 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 PCBP2Q15366 365 aaKnown RBP eCLIP6.88□□□□□ -1.31
CBWD1-219ENST00000611457 CEBPEQ15744 281 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 HYAL4Q2M3T9 481 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 SMU1Q2TAY7 513 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 ZNF324BQ6AW86 544 aaPredicted RBP6.88□□□□□ -1.31
CBWD1-219ENST00000611457 TMEM214Q6NUQ4 689 aaKnown RBP6.88□□□□□ -1.31
CBWD1-219ENST00000611457 FAM151BQ6UXP7 276 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 UNC5AQ6ZN44 842 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 LRRC74BQ6ZQY2 392 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 ZC3HC1Q86WB0 502 aaKnown RBP6.88□□□□□ -1.31
CBWD1-219ENST00000611457 ZSCAN1Q8NBB4 408 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 GDAP1Q8TB36 358 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 FBXO25Q8TCJ0 367 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms