RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 SRPRAP08240 638 aaKnown RBP13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 HLA-EP13747 358 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 SYN1P17600 705 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 IGFALSP35858 605 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 ABHD18Q0P651 414 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 IQCCQ4KMZ1 466 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 ZNF554Q86TJ5 538 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 AKAP14Q86UN6 197 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 PRSS58Q8IYP2 241 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 PEX13Q92968 403 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 C11orf24Q96F05 449 aaPredicted RBP13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 KCNC2Q96PR1 638 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 TLR9Q9NR96 1032 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 DNAJC25-GNG10A0A024R161 153 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 RHPN2P1A8MT19 583 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 FAM189A1O60320 539 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 SOCS5O75159 536 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 STATHP02808 62 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 TRIM32Q13049 653 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 CLIP4Q8N3C7 705 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 KCT2Q8NC54 265 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 ZNF382Q96SR6 550 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 OR51V1Q9H2C8 321 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 NEK6Q9HC98 313 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 MAN2B2Q9Y2E5 1009 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 SAGE2PA6NJ88 616 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 DIRAS1O95057 198 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 RPLP0P05388 317 aaKnown RBP13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 GSCP56915 257 aaPredicted RBP13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 PEG10Q86TG7 708 aaKnown RBP13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 FCGR1BQ92637 280 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 PKP4Q99569 1192 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 GALNT8Q9NY28 637 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 CCDC85CA6NKD9 419 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 ECDO95905 644 aaPredicted RBP13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 EDN1P05305 212 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 STK19P49842 368 aaPredicted RBP13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 ATP4BP51164 291 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 RPS13P62277 151 aaKnown RBP13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 IPCEF1Q8WWN9 437 aaPredicted RBP13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 SCAMP4Q969E2 229 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 SLC22A18Q96BI1 424 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 TBC1D17Q9HA65 648 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 MAGEE1Q9HCI5 957 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 POLMQ9NP87 494 aaPredicted RBP13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 NKIRAS2Q9NYR9 191 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 IRAK3Q9Y616 596 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 MYH7P12883 1935 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 ZNF840PA6NDX5 716 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 M0QX08 132 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 SNX4O95219 450 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 HNF1BP35680 557 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 PIK3CBP42338 1070 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 CCT3P49368 545 aaKnown RBP13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 CDK6Q00534 326 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 NPTX1Q15818 432 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 CARTPTQ16568 116 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 CRB2Q5IJ48 1285 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 LIN54Q6MZP7 749 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 TMIGD1Q6UXZ0 262 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 ENDOVQ8N8Q3 282 aaKnown RBP13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 GEMIN6Q8WXD5 167 aaKnown RBP13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 ARMC5Q96C12 935 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 RTP4Q96DX8 246 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 SIPA1Q96FS4 1042 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 FAM120CQ9NX05 1096 aaKnown RBP13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 TMEM98Q9Y2Y6 226 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 PEX16Q9Y5Y5 336 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 TRBC2A0A5B9 178 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 H7C0S8 307 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 NDUFS4O43181 175 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 RSL1D1O76021 490 aaKnown RBP13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 BCHEP06276 602 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 ARSDP51689 593 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 PGDP52209 483 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 SP140Q13342 867 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 RTP2Q5QGT7 225 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 RBM48Q5RL73 367 aaKnown RBP13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 TRIM74Q86UV6 250 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 OR4C6Q8NH72 309 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 RNASE11Q8TAA1 199 aaKnown RBP13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 METTL21AQ8WXB1 218 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 STON2Q8WXE9 905 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 P2RX2Q9UBL9 471 aa13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 GPN3Q9UHW5 284 aaPredicted RBP13.87□□□□□ -0.19
PCDHB16-201ENST00000609684 IQCMA0A1B0GVH7 501 aa13.86□□□□□ -0.19
PCDHB16-201ENST00000609684 JUNP05412 331 aaKnown RBP13.86□□□□□ -0.19
PCDHB16-201ENST00000609684 TAS2R50P59544 299 aa13.86□□□□□ -0.19
PCDHB16-201ENST00000609684 SYT16Q17RD7 645 aa13.86□□□□□ -0.19
PCDHB16-201ENST00000609684 RHEBL1Q8TAI7 183 aa13.86□□□□□ -0.19
PCDHB16-201ENST00000609684 CEP295NLQ96MC4 621 aa13.86□□□□□ -0.19
PCDHB16-201ENST00000609684 IL4I1Q96RQ9 567 aa13.86□□□□□ -0.19
PCDHB16-201ENST00000609684 GINS4Q9BRT9 223 aa13.86□□□□□ -0.19
PCDHB16-201ENST00000609684 IFT27Q9BW83 186 aa13.86□□□□□ -0.19
PCDHB16-201ENST00000609684 CDADC1Q9BWV3 514 aa13.86□□□□□ -0.19
PCDHB16-201ENST00000609684 LRRC42Q9Y546 428 aa13.86□□□□□ -0.19
PCDHB16-201ENST00000609684 C4BP0C0L5 1744 aa13.86□□□□□ -0.19
PCDHB16-201ENST00000609684 TIAM2Q8IVF5 1701 aa13.86□□□□□ -0.19
PCDHB16-201ENST00000609684 C2orf78A6NCI8 922 aa13.86□□□□□ -0.19
PCDHB16-201ENST00000609684 DUXAA6NLW8 204 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms