RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 TAP2Q03519 686 aa13.78□□□□□ -0.2
PKNOX1-210ENST00000607049 RELAQ04206 551 aa13.78□□□□□ -0.2
PKNOX1-210ENST00000607049 MGAT5Q09328 741 aa13.78□□□□□ -0.2
PKNOX1-210ENST00000607049 CHAF1BQ13112 559 aa13.78□□□□□ -0.2
PKNOX1-210ENST00000607049 ATP1A4Q13733 1029 aa13.78□□□□□ -0.2
PKNOX1-210ENST00000607049 TEDDM1Q5T9Z0 273 aa13.78□□□□□ -0.2
PKNOX1-210ENST00000607049 CPZQ66K79 652 aa13.78□□□□□ -0.2
PKNOX1-210ENST00000607049 MRPL14Q6P1L8 145 aaKnown RBP13.78□□□□□ -0.2
PKNOX1-210ENST00000607049 CYHR1Q6ZMK1 362 aa13.78□□□□□ -0.2
PKNOX1-210ENST00000607049 MRGPREQ86SM8 312 aa13.78□□□□□ -0.2
PKNOX1-210ENST00000607049 EEF1AKMT1Q8WVE0 214 aa13.78□□□□□ -0.2
PKNOX1-210ENST00000607049 MVB12AQ96EY5 273 aa13.78□□□□□ -0.2
PKNOX1-210ENST00000607049 LINGO1Q96FE5 620 aa13.78□□□□□ -0.2
PKNOX1-210ENST00000607049 TRIM55Q9BYV6 548 aa13.78□□□□□ -0.2
PKNOX1-210ENST00000607049 TRIM4Q9C037 500 aa13.78□□□□□ -0.2
PKNOX1-210ENST00000607049 ZNF304Q9HCX3 659 aa13.78□□□□□ -0.2
PKNOX1-210ENST00000607049 GPR83Q9NYM4 423 aa13.78□□□□□ -0.2
PKNOX1-210ENST00000607049 TXNDC16Q9P2K2 825 aa13.78□□□□□ -0.2
PKNOX1-210ENST00000607049 CDC23Q9UJX2 597 aa13.78□□□□□ -0.2
PKNOX1-210ENST00000607049 MED16Q9Y2X0 877 aa13.78□□□□□ -0.2
PKNOX1-210ENST00000607049 VWA7Q9Y334 891 aa13.78□□□□□ -0.2
PKNOX1-210ENST00000607049 SNX24Q9Y343 169 aa13.78□□□□□ -0.2
PKNOX1-210ENST00000607049 UTP11Q9Y3A2 253 aaKnown RBP13.78□□□□□ -0.2
PKNOX1-210ENST00000607049 TEX264Q9Y6I9 313 aa13.78□□□□□ -0.2
PKNOX1-210ENST00000607049 A6NL46 340 aa13.77□□□□□ -0.21
PKNOX1-210ENST00000607049 DPM1O60762 260 aa13.77□□□□□ -0.21
PKNOX1-210ENST00000607049 IPO13O94829 963 aaKnown RBP13.77□□□□□ -0.21
PKNOX1-210ENST00000607049 CTSBP07858 339 aa13.77□□□□□ -0.21
PKNOX1-210ENST00000607049 ANXA5P08758 320 aa13.77□□□□□ -0.21
PKNOX1-210ENST00000607049 SPTBP11277 2137 aa13.77□□□□□ -0.21
PKNOX1-210ENST00000607049 SLC12A2P55011 1212 aa13.77□□□□□ -0.21
PKNOX1-210ENST00000607049 ETF1P62495 437 aaKnown RBP13.77□□□□□ -0.21
PKNOX1-210ENST00000607049 NDUFA9Q16795 377 aa13.77□□□□□ -0.21
PKNOX1-210ENST00000607049 HECTD2Q5U5R9 776 aa13.77□□□□□ -0.21
PKNOX1-210ENST00000607049 GARNL3Q5VVW2 1013 aa13.77□□□□□ -0.21
PKNOX1-210ENST00000607049 STEAP4Q687X5 459 aa13.77□□□□□ -0.21
PKNOX1-210ENST00000607049 FRMPD2BQ6IN97 320 aa13.77□□□□□ -0.21
PKNOX1-210ENST00000607049 PAQR3Q6TCH7 311 aa13.77□□□□□ -0.21
PKNOX1-210ENST00000607049 ANKMY2Q8IV38 441 aa13.77□□□□□ -0.21
PKNOX1-210ENST00000607049 IGDCC3Q8IVU1 814 aa13.77□□□□□ -0.21
PKNOX1-210ENST00000607049 TBC1D19Q8N5T2 526 aa13.77□□□□□ -0.21
PKNOX1-210ENST00000607049 CSNK1A1LQ8N752 337 aa13.77□□□□□ -0.21
PKNOX1-210ENST00000607049 PPFIBP2Q8ND30 876 aa13.77□□□□□ -0.21
PKNOX1-210ENST00000607049 FBXO36Q8NEA4 188 aa13.77□□□□□ -0.21
PKNOX1-210ENST00000607049 SPATA4Q8NEY3 305 aa13.77□□□□□ -0.21
PKNOX1-210ENST00000607049 PYROXD1Q8WU10 500 aa13.77□□□□□ -0.21
PKNOX1-210ENST00000607049 ATL1Q8WXF7 558 aa13.77□□□□□ -0.21
PKNOX1-210ENST00000607049 TM9SF4Q92544 642 aa13.77□□□□□ -0.21
PKNOX1-210ENST00000607049 GCN1Q92616 2671 aaKnown RBP13.77□□□□□ -0.21
PKNOX1-210ENST00000607049 CDKL2Q92772 493 aa13.77□□□□□ -0.21
PKNOX1-210ENST00000607049 VPS39Q96JC1 886 aa13.77□□□□□ -0.21
PKNOX1-210ENST00000607049 FAM129AQ9BZQ8 928 aa13.77□□□□□ -0.21
PKNOX1-210ENST00000607049 SLC26A1Q9H2B4 701 aa13.77□□□□□ -0.21
PKNOX1-210ENST00000607049 SLC6A20Q9NP91 592 aa13.77□□□□□ -0.21
PKNOX1-210ENST00000607049 ATP13A2Q9NQ11 1180 aa13.77□□□□□ -0.21
PKNOX1-210ENST00000607049 P4HTMQ9NXG6 502 aa13.77□□□□□ -0.21
PKNOX1-210ENST00000607049 ZNF282Q9UDV7 671 aaPredicted RBP13.77□□□□□ -0.21
PKNOX1-210ENST00000607049 SEC16AO15027 2179 aa13.76□□□□□ -0.21
PKNOX1-210ENST00000607049 H0YGG7 62 aa13.76□□□□□ -0.21
PKNOX1-210ENST00000607049 ONECUT2O95948 504 aa13.76□□□□□ -0.21
PKNOX1-210ENST00000607049 ENO2P09104 434 aaPredicted RBP13.76□□□□□ -0.21
PKNOX1-210ENST00000607049 FBLP22087 321 aaKnown RBP13.76□□□□□ -0.21
PKNOX1-210ENST00000607049 MMP11P24347 488 aa13.76□□□□□ -0.21
PKNOX1-210ENST00000607049 IMPA1P29218 277 aa13.76□□□□□ -0.21
PKNOX1-210ENST00000607049 CDKN2DP55273 166 aa13.76□□□□□ -0.21
PKNOX1-210ENST00000607049 AP1S2P56377 157 aa13.76□□□□□ -0.21
PKNOX1-210ENST00000607049 ARF3P61204 181 aaPredicted RBP13.76□□□□□ -0.21
PKNOX1-210ENST00000607049 FAM69BQ5VUD6 431 aa13.76□□□□□ -0.21
PKNOX1-210ENST00000607049 PRAMEF13Q5VWM6 474 aa13.76□□□□□ -0.21
PKNOX1-210ENST00000607049 CAPN13Q6MZZ7 669 aaPredicted RBP13.76□□□□□ -0.21
PKNOX1-210ENST00000607049 FBXO42Q6P3S6 717 aa13.76□□□□□ -0.21
PKNOX1-210ENST00000607049 SLC26A11Q86WA9 606 aa13.76□□□□□ -0.21
PKNOX1-210ENST00000607049 ATCAYQ86WG3 371 aa13.76□□□□□ -0.21
PKNOX1-210ENST00000607049 PAQR7Q86WK9 346 aa13.76□□□□□ -0.21
PKNOX1-210ENST00000607049 C17orf64Q86WR6 236 aa13.76□□□□□ -0.21
PKNOX1-210ENST00000607049 ZBED8Q8IZ13 594 aa13.76□□□□□ -0.21
PKNOX1-210ENST00000607049 MIEF2Q96C03 454 aa13.76□□□□□ -0.21
PKNOX1-210ENST00000607049 ERP44Q9BS26 406 aa13.76□□□□□ -0.21
PKNOX1-210ENST00000607049 HAUS8Q9BT25 410 aa13.76□□□□□ -0.21
PKNOX1-210ENST00000607049 YIPF2Q9BWQ6 316 aa13.76□□□□□ -0.21
PKNOX1-210ENST00000607049 RAB17Q9H0T7 212 aa13.76□□□□□ -0.21
PKNOX1-210ENST00000607049 EPN3Q9H201 632 aa13.76□□□□□ -0.21
PKNOX1-210ENST00000607049 SEMA3GQ9NS98 782 aa13.76□□□□□ -0.21
PKNOX1-210ENST00000607049 TMEM184CQ9NVA4 438 aa13.76□□□□□ -0.21
PKNOX1-210ENST00000607049 ARL15Q9NXU5 204 aa13.76□□□□□ -0.21
PKNOX1-210ENST00000607049 WHRNQ9P202 907 aa13.76□□□□□ -0.21
PKNOX1-210ENST00000607049 STOX2Q9P2F5 926 aaPredicted RBP13.76□□□□□ -0.21
PKNOX1-210ENST00000607049 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.76□□□□□ -0.21
PKNOX1-210ENST00000607049 LOC105369274A0A096LPK9 316 aa13.75□□□□□ -0.21
PKNOX1-210ENST00000607049 LOC102723532A0A0G2JNH3 316 aa13.75□□□□□ -0.21
PKNOX1-210ENST00000607049 TTLL8A6PVC2 850 aa13.75□□□□□ -0.21
PKNOX1-210ENST00000607049 AGPSO00116 658 aa13.75□□□□□ -0.21
PKNOX1-210ENST00000607049 EIF3HO15372 352 aaKnown RBP eCLIP13.75□□□□□ -0.21
PKNOX1-210ENST00000607049 CEACAM4O75871 244 aa13.75□□□□□ -0.21
PKNOX1-210ENST00000607049 NR1D1P20393 614 aa13.75□□□□□ -0.21
PKNOX1-210ENST00000607049 SAT1P21673 171 aa13.75□□□□□ -0.21
PKNOX1-210ENST00000607049 VARSP26640 1264 aaKnown RBP13.75□□□□□ -0.21
PKNOX1-210ENST00000607049 GABRB3P28472 473 aa13.75□□□□□ -0.21
PKNOX1-210ENST00000607049 RPL21P46778 160 aaKnown RBP13.75□□□□□ -0.21
PKNOX1-210ENST00000607049 GCGRP47871 477 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms