RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 MDM4O15151 490 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 PROM1O43490 865 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 MED7O43513 233 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 RGS10O43665 173 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 KPNA6O60684 536 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 DPM1O60762 260 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 PTP4A3O75365 173 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 SEC22BO75396 215 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 VPS26AO75436 327 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 RFPL3O75679 317 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 PAPSS2O95340 614 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 LGI1O95970 557 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 RBP1P09455 135 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 ADORA3P0DMS8 318 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 RRASP10301 218 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 DBTP11182 482 aaKnown RBP3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 CYP2A6P11509 494 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 CKMT1AP12532 417 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 CD36P16671 472 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZNF16P17020 682 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 ALOX12P18054 663 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 GTF2E2P29084 291 aaKnown RBP3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 UQCRC1P31930 480 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 RPL9P32969 192 aaKnown RBP3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 CYP2C18P33260 490 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 EVI2BP34910 448 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 TRIM23P36406 574 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 RECQLP46063 649 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 HAAOP46952 286 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 NPTX2P47972 431 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 PXNP49023 591 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 GSK3BP49841 420 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 SCNN1GP51170 649 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 MAPK10P53779 464 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 BCAR1P56945 870 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 NCS1P62166 190 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 RPS8P62241 208 aaKnown RBP3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 BTG1P62324 171 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 IGBP1P78318 339 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 FLI1Q01543 452 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 RUNX1T1Q06455 604 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 SCN1BQ07699 218 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 MGAT3Q09327 533 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 ABHD18Q0P651 414 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 MAPK11Q15759 364 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 GPR162Q16538 588 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 CARTPTQ16568 116 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 FSCN1Q16658 493 aaKnown RBP3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 UGP2Q16851 508 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 MICAQ29983 383 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 COL28A1Q2UY09 1125 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 UGT3A2Q3SY77 523 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 FAM98BQ52LJ0 330 aaKnown RBP3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 SETMARQ53H47 684 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 COLEC12Q5KU26 742 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZBTB41Q5SVQ8 909 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 SLC35F1Q5T1Q4 408 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 CACHD1Q5VU97 1274 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 NXNL2Q5VZ03 156 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 TMEM236Q5W0B7 351 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 FAM109BQ6ICB4 259 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 SLFN12LQ6IEE8 588 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 DENND5AQ6IQ26 1287 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 CAPN13Q6MZZ7 669 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 SLC39A4Q6P5W5 647 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 PKN3Q6P5Z2 889 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 TMEM65Q6PI78 240 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 TMEM270Q6UE05 265 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZNF704Q6ZNC4 412 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 CCDC149Q6ZUS6 474 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 HTR3DQ70Z44 454 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 SLC26A9Q7LBE3 791 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 EFL1Q7Z2Z2 1120 aaKnown RBP3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 SLC46A3Q7Z3Q1 461 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 SPATA19Q7Z5L4 167 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 NRARPQ7Z6K4 114 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 STRA8Q7Z7C7 330 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 DDX53Q86TM3 631 aaKnown RBP3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 FAM83AQ86UY5 434 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 GATAD2AQ86YP4 633 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 HIPK1Q86Z02 1210 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 SLC22A9Q8IVM8 553 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 CCDC117Q8IWD4 279 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 BRSK2Q8IWQ3 736 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 CDH26Q8IXH8 852 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 KLHDC8BQ8IXV7 354 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 MICU2Q8IYU8 434 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 NLGN4XQ8N0W4 816 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 LRRC47Q8N1G4 583 aaKnown RBP3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 MPP5Q8N3R9 675 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 EIF4E3Q8N5X7 224 aaKnown RBP3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 DPP10Q8N608 796 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 EMC1Q8N766 993 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 DNERQ8NFT8 737 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 RDM1Q8NG50 284 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 FANK1Q8TC84 345 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 FRS2Q8WU20 508 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 CHTF18Q8WVB6 975 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZCCHC14Q8WYQ9 949 aaKnown RBP3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 PIGBQ92521 554 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms