RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 CCDC3Q9BQI4 270 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 TMEM79Q9BSE2 394 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 HAUS8Q9BT25 410 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 ERVK-6Q9BXR3 956 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 CAPS2Q9BXY5 557 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 CHRNA10Q9GZZ6 450 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 LRRN3Q9H3W5 708 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 KCNK9Q9NPC2 374 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 CCDC177Q9NQR7 707 aaPredicted RBP11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 HRASLS2Q9NWW9 162 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 NKIRAS1Q9NYS0 192 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 WWOXQ9NZC7 414 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 GPRC5BQ9NZH0 403 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 POMT2Q9UKY4 750 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 PLAGL1Q9UM63 463 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 PCDHB11Q9Y5F2 797 aa11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 MN1Q10571 1320 aaPredicted RBP11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 UTP20O75691 2785 aaKnown RBP11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 MDC1Q14676 2089 aaKnown RBP11.23□□□□□ -0.61
CHMP2A-207ENST00000600804 KRT87PA6NCN2 255 aa11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 OR6C74A6NCV1 312 aa11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 NCF1BA6NI72 391 aaPredicted RBP11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 NCF1CA8MVU1 366 aaPredicted RBP11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 K7EPI3 171 aa11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 TOX3O15405 576 aaPredicted RBP11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 TRIM13O60858 407 aa11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 H2AFYO75367 372 aaKnown RBP11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 DXOO77932 396 aaKnown RBP11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 CCNDBP1O95273 360 aa11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 CPNE6O95741 557 aa11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 NCF1P14598 390 aaPredicted RBP11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 AMD1P17707 334 aa11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 NR1D1P20393 614 aa11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 PEBP1P30086 187 aaKnown RBP11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 SERPINB5P36952 375 aa11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 WDR4P57081 412 aaKnown RBP11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 PCBP4P57723 403 aaKnown RBP11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 OR1D5P58170 312 aa11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 GABREP78334 506 aa11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 RELAQ04206 551 aa11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 PRDX1Q06830 199 aaKnown RBP11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 FASTKQ14296 549 aaKnown RBP11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 PCLAFQ15004 111 aa11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 THOC6Q86W42 341 aaKnown RBP11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 ZNF761Q86XN6 746 aaPredicted RBP11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 ARFGAP2Q8N6H7 521 aa11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 CCDC63Q8NA47 563 aa11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 OR2A1Q8NGT9 310 aa11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 SREK1Q8WXA9 508 aaKnown RBP11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 RSC1A1Q92681 617 aa11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 ZDHHC12Q96GR4 267 aa11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 PRR11Q96HE9 360 aaPredicted RBP11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 ZNF578Q96N58 590 aaPredicted RBP11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 PITPNM3Q9BZ71 974 aa11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 EHD1Q9H4M9 534 aa11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 XKR8Q9H6D3 395 aa11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 INTS7Q9NVH2 962 aaKnown RBP11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 ACTR10Q9NZ32 417 aa11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 ANKMY1Q9P2S6 941 aa11.22□□□□□ -0.61
CHMP2A-207ENST00000600804 A0A1W2PQM1 296 aa11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 H3BQF6 201 aa11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 E2F3O00716 465 aa11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 CSO75390 466 aaKnown RBP11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 KATNA1O75449 491 aa11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 SNUPNO95149 360 aaKnown RBP11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 NPPBP16860 134 aa11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 ALDH4A1P30038 563 aa11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 PRDX3P30048 256 aaKnown RBP11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 ALDH3A1P30838 453 aa11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 CASP2P42575 452 aa11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 HSPA7P48741 367 aa11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 AGTR2P50052 363 aa11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 GALNT1Q10472 559 aaPredicted RBP11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 ZNF678Q5SXM1 525 aa11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 PRAMEF13Q5VWM6 474 aa11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 ARMC6Q6NXE6 501 aa11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 TMEM71Q6P5X7 295 aa11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 SPESP1Q6UW49 350 aa11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 PRSS42Q7Z5A4 293 aa11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 C10orf107Q8IVU9 208 aa11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 HOMEZQ8IX15 550 aa11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 ABHD11Q8NFV4 315 aa11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 OR2L3Q8NG85 312 aa11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 OR4D9Q8NGE8 314 aa11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 RAB3IL1Q8TBN0 382 aa11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 ZNF483Q8TF39 744 aaPredicted RBP11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 SNRNP27Q8WVK2 155 aaKnown RBP11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 EXT2Q93063 718 aa11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 ZUFSPQ96AP4 578 aa11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 ZBTB9Q96C00 473 aa11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 PHF21BQ96EK2 531 aa11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 WDR34Q96EX3 536 aa11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 AHCYL2Q96HN2 611 aaKnown RBP11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 TMEM237Q96Q45 408 aa11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 OR2A14Q96R47 310 aa11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 OR4K3Q96R72 315 aa11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 TRMOQ9BU70 441 aa11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 PITHD1Q9GZP4 211 aaPredicted RBP11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 ATG10Q9H0Y0 220 aa11.21□□□□□ -0.61
CHMP2A-207ENST00000600804 C12orf65Q9H3J6 166 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms