RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 SMAD5Q99717 465 aaKnown RBP14.96□□□□□ -0.01
IRF3-226ENST00000600453 HIST1H2AJQ99878 128 aa14.96□□□□□ -0.01
IRF3-226ENST00000600453 H2AFJQ9BTM1 129 aa14.96□□□□□ -0.01
IRF3-226ENST00000600453 TRIM54Q9BYV2 358 aa14.96□□□□□ -0.01
IRF3-226ENST00000600453 PARVBQ9HBI1 364 aa14.96□□□□□ -0.01
IRF3-226ENST00000600453 P4HTMQ9NXG6 502 aa14.96□□□□□ -0.01
IRF3-226ENST00000600453 TAC3Q9UHF0 121 aa14.96□□□□□ -0.01
IRF3-226ENST00000600453 LOC105369274A0A096LPK9 316 aa14.95□□□□□ -0.02
IRF3-226ENST00000600453 LOC102723532A0A0G2JNH3 316 aa14.95□□□□□ -0.02
IRF3-226ENST00000600453 A6NL46 340 aa14.95□□□□□ -0.02
IRF3-226ENST00000600453 TTLL8A6PVC2 850 aa14.95□□□□□ -0.02
IRF3-226ENST00000600453 AGPSO00116 658 aa14.95□□□□□ -0.02
IRF3-226ENST00000600453 AHSGP02765 367 aa14.95□□□□□ -0.02
IRF3-226ENST00000600453 ATXN8OSP0DMR3 200 aa14.95□□□□□ -0.02
IRF3-226ENST00000600453 CCND1P24385 295 aa14.95□□□□□ -0.02
IRF3-226ENST00000600453 MCM3P25205 808 aa14.95□□□□□ -0.02
IRF3-226ENST00000600453 ELK3P41970 407 aa14.95□□□□□ -0.02
IRF3-226ENST00000600453 SOX8P57073 446 aa14.95□□□□□ -0.02
IRF3-226ENST00000600453 SP140Q13342 867 aa14.95□□□□□ -0.02
IRF3-226ENST00000600453 FRG1Q14331 258 aaKnown RBP14.95□□□□□ -0.02
IRF3-226ENST00000600453 NKG7Q16617 165 aa14.95□□□□□ -0.02
IRF3-226ENST00000600453 HIF1AQ16665 826 aa14.95□□□□□ -0.02
IRF3-226ENST00000600453 MSS51Q4VC12 460 aa14.95□□□□□ -0.02
IRF3-226ENST00000600453 FRMPD2BQ6IN97 320 aa14.95□□□□□ -0.02
IRF3-226ENST00000600453 HIBCHQ6NVY1 386 aaPredicted RBP14.95□□□□□ -0.02
IRF3-226ENST00000600453 CPNE9Q8IYJ1 553 aa14.95□□□□□ -0.02
IRF3-226ENST00000600453 OR4N4Q8N0Y3 316 aa14.95□□□□□ -0.02
IRF3-226ENST00000600453 FDCSPQ8NFU4 85 aa14.95□□□□□ -0.02
IRF3-226ENST00000600453 CABS1Q96KC9 395 aa14.95□□□□□ -0.02
IRF3-226ENST00000600453 SEMA3GQ9NS98 782 aa14.95□□□□□ -0.02
IRF3-226ENST00000600453 SLC22A11Q9NSA0 550 aa14.95□□□□□ -0.02
IRF3-226ENST00000600453 TMEM184CQ9NVA4 438 aa14.95□□□□□ -0.02
IRF3-226ENST00000600453 ZNF282Q9UDV7 671 aaPredicted RBP14.95□□□□□ -0.02
IRF3-226ENST00000600453 CDC23Q9UJX2 597 aa14.95□□□□□ -0.02
IRF3-226ENST00000600453 KRT87PA6NCN2 255 aa14.94□□□□□ -0.02
IRF3-226ENST00000600453 EFCAB8A8MWE9 144 aa14.94□□□□□ -0.02
IRF3-226ENST00000600453 H0YGG7 62 aa14.94□□□□□ -0.02
IRF3-226ENST00000600453 ZIC2O95409 532 aaPredicted RBP14.94□□□□□ -0.02
IRF3-226ENST00000600453 PDGFAP04085 211 aa14.94□□□□□ -0.02
IRF3-226ENST00000600453 ITGA8P53708 1063 aa14.94□□□□□ -0.02
IRF3-226ENST00000600453 IL2P60568 153 aa14.94□□□□□ -0.02
IRF3-226ENST00000600453 ARF3P61204 181 aaPredicted RBP14.94□□□□□ -0.02
IRF3-226ENST00000600453 AIMP2Q13155 320 aaKnown RBP14.94□□□□□ -0.02
IRF3-226ENST00000600453 PDAP1Q13442 181 aaKnown RBP14.94□□□□□ -0.02
IRF3-226ENST00000600453 MYBPC3Q14896 1274 aa14.94□□□□□ -0.02
IRF3-226ENST00000600453 NDUFA9Q16795 377 aa14.94□□□□□ -0.02
IRF3-226ENST00000600453 TEDDM1Q5T9Z0 273 aa14.94□□□□□ -0.02
IRF3-226ENST00000600453 VWA5B1Q5TIE3 1220 aa14.94□□□□□ -0.02
IRF3-226ENST00000600453 IRAK1BP1Q5VVH5 260 aa14.94□□□□□ -0.02
IRF3-226ENST00000600453 ZNF425Q6IV72 752 aa14.94□□□□□ -0.02
IRF3-226ENST00000600453 PIWIL4Q7Z3Z4 852 aaKnown RBP14.94□□□□□ -0.02
IRF3-226ENST00000600453 ADCK2Q7Z695 626 aa14.94□□□□□ -0.02
IRF3-226ENST00000600453 PAQR7Q86WK9 346 aa14.94□□□□□ -0.02
IRF3-226ENST00000600453 GALNT16Q8N428 558 aa14.94□□□□□ -0.02
IRF3-226ENST00000600453 EFCAB3Q8N7B9 438 aa14.94□□□□□ -0.02
IRF3-226ENST00000600453 EEF1AKMT1Q8WVE0 214 aa14.94□□□□□ -0.02
IRF3-226ENST00000600453 TM9SF4Q92544 642 aa14.94□□□□□ -0.02
IRF3-226ENST00000600453 FAM129AQ9BZQ8 928 aa14.94□□□□□ -0.02
IRF3-226ENST00000600453 SLC6A20Q9NP91 592 aa14.94□□□□□ -0.02
IRF3-226ENST00000600453 CCDC177Q9NQR7 707 aaPredicted RBP14.94□□□□□ -0.02
IRF3-226ENST00000600453 VWA7Q9Y334 891 aa14.94□□□□□ -0.02
IRF3-226ENST00000600453 TEX264Q9Y6I9 313 aa14.94□□□□□ -0.02
IRF3-226ENST00000600453 MDC1Q14676 2089 aaKnown RBP14.93□□□□□ -0.02
IRF3-226ENST00000600453 VSTM2BA6NLU5 285 aa14.93□□□□□ -0.02
IRF3-226ENST00000600453 PCDH17O14917 1159 aa14.93□□□□□ -0.02
IRF3-226ENST00000600453 TTI1O43156 1089 aa14.93□□□□□ -0.02
IRF3-226ENST00000600453 CNOT3O75175 753 aaKnown RBP14.93□□□□□ -0.02
IRF3-226ENST00000600453 SEC31AO94979 1220 aaKnown RBP14.93□□□□□ -0.02
IRF3-226ENST00000600453 UMODP07911 640 aa14.93□□□□□ -0.02
IRF3-226ENST00000600453 GABRB3P28472 473 aa14.93□□□□□ -0.02
IRF3-226ENST00000600453 OR1D4P47884 311 aa14.93□□□□□ -0.02
IRF3-226ENST00000600453 PRTGQ2VWP7 1150 aa14.93□□□□□ -0.02
IRF3-226ENST00000600453 FAM45BPQ6NSW5 357 aa14.93□□□□□ -0.02
IRF3-226ENST00000600453 PAQR3Q6TCH7 311 aa14.93□□□□□ -0.02
IRF3-226ENST00000600453 MAATS1Q7Z4T9 603 aa14.93□□□□□ -0.02
IRF3-226ENST00000600453 PPP1R32Q7Z5V6 425 aa14.93□□□□□ -0.02
IRF3-226ENST00000600453 IGDCC3Q8IVU1 814 aa14.93□□□□□ -0.02
IRF3-226ENST00000600453 LRRC56Q8IYG6 542 aaPredicted RBP14.93□□□□□ -0.02
IRF3-226ENST00000600453 CSNK1A1LQ8N752 337 aa14.93□□□□□ -0.02
IRF3-226ENST00000600453 PPFIBP2Q8ND30 876 aa14.93□□□□□ -0.02
IRF3-226ENST00000600453 FAM45AQ8TCE6 357 aa14.93□□□□□ -0.02
IRF3-226ENST00000600453 MIEF2Q96C03 454 aa14.93□□□□□ -0.02
IRF3-226ENST00000600453 THAP11Q96EK4 314 aa14.93□□□□□ -0.02
IRF3-226ENST00000600453 CFAP36Q96G28 342 aa14.93□□□□□ -0.02
IRF3-226ENST00000600453 OR2A5Q96R48 311 aa14.93□□□□□ -0.02
IRF3-226ENST00000600453 NDNQ99608 321 aa14.93□□□□□ -0.02
IRF3-226ENST00000600453 NUDT9Q9BW91 350 aa14.93□□□□□ -0.02
IRF3-226ENST00000600453 SLAMF7Q9NQ25 335 aa14.93□□□□□ -0.02
IRF3-226ENST00000600453 ABCF3Q9NUQ8 709 aa14.93□□□□□ -0.02
IRF3-226ENST00000600453 NSMCE4AQ9NXX6 385 aa14.93□□□□□ -0.02
IRF3-226ENST00000600453 CHMP2BQ9UQN3 213 aa14.93□□□□□ -0.02
IRF3-226ENST00000600453 TNRC6AQ8NDV7 1962 aaKnown RBP14.93□□□□□ -0.02
IRF3-226ENST00000600453 KCNE1BA0A087WTH5 132 aa14.92□□□□□ -0.02
IRF3-226ENST00000600453 H7BY64 318 aa14.92□□□□□ -0.02
IRF3-226ENST00000600453 VPS4BO75351 444 aa14.92□□□□□ -0.02
IRF3-226ENST00000600453 BANF1O75531 89 aa14.92□□□□□ -0.02
IRF3-226ENST00000600453 F7P08709 466 aaPredicted RBP14.92□□□□□ -0.02
IRF3-226ENST00000600453 ANXA5P08758 320 aa14.92□□□□□ -0.02
IRF3-226ENST00000600453 FBLP22087 321 aaKnown RBP14.92□□□□□ -0.02
IRF3-226ENST00000600453 IMPA1P29218 277 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms