RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 OR7A17O14581 309 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 WFS1O76024 890 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 MT-CO3P00414 261 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 FGF3P11487 239 aaPredicted RBP12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 CDH1P12830 882 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 GNAZP19086 355 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 NR1D1P20393 614 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 MAGP20916 626 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 CDH3P22223 829 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 CASP2P42575 452 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 INHBCP55103 352 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 CLDN6P56747 220 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 NAA20P61599 178 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 RELAQ04206 551 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 GPS2Q13227 327 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 GTF2H2Q13888 395 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 NAA25Q14CX7 972 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 CACHD1Q5VU97 1274 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 FCRL6Q6DN72 434 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 GTF2H2CQ6P1K8 395 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 FIGLAQ6QHK4 219 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 NXPE4Q6UWF7 544 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 FRMD7Q6ZUT3 714 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 RPS27LQ71UM5 84 aaKnown RBP12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 PAQR7Q86WK9 346 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 FAM129CQ86XR2 697 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 KMT5CQ86Y97 462 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 NUDCD3Q8IVD9 361 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 DCBLD1Q8N8Z6 715 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 SNX31Q8N9S9 440 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 MGARPQ8TDB4 240 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 ADAMTS14Q8WXS8 1223 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 ZUFSPQ96AP4 578 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 TMEM74Q96NL1 305 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 PLCD4Q9BRC7 762 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 DPH7Q9BTV6 452 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 ZMYND15Q9H091 742 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 EHD1Q9H4M9 534 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 ZNF768Q9H5H4 540 aaKnown RBP12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 PELI2Q9HAT8 420 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 ABCF3Q9NUQ8 709 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 TMEM184CQ9NVA4 438 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 KLHL3Q9UH77 587 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 SNX7Q9UNH6 387 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 KLHL20Q9Y2M5 609 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 DYRK1BQ9Y463 629 aa12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 COL27A1Q8IZC6 1860 aaPredicted RBP12.16□□□□□ -0.46
CHMP2A-206ENST00000600118 WDR91A4D1P6 747 aa12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 E7EQ34 232 aa12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 H7BY64 318 aa12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 PPP6CO00743 305 aa12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 NRP2O60462 931 aa12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 PRAMEF10O60809 474 aa12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 KATNA1O75449 491 aa12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 RASSF9O75901 435 aa12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 SUPT7LO94864 414 aa12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 ZBTB11O95625 1053 aaPredicted RBP12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 C1GALT1C1LP0DN25 315 aa12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 CHN1P15882 459 aa12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 NELFEP18615 380 aaKnown RBP12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 VARSP26640 1264 aaKnown RBP12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 CCR8P51685 355 aa12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 CDH13P55290 713 aa12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 CSNK1G2P78368 415 aa12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 CLCQ05315 142 aa12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 ASPHQ12797 758 aa12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 LCP2Q13094 533 aa12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 TRAF3Q13114 568 aa12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 PUM1Q14671 1186 aaKnown RBP eCLIP12.15□□□□□ -0.462e-7■■■□□ 17.1
CHMP2A-206ENST00000600118 TBCCQ15814 346 aa12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 ISXQ2M1V0 245 aa12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 SNAP47Q5SQN1 464 aa12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 CATSPEREQ5SY80 951 aa12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 HES3Q5TGS1 186 aa12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 HHATQ5VTY9 493 aa12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 CES4AQ5XG92 561 aa12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 ATG9BQ674R7 924 aa12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 CCNYL1Q8N7R7 359 aa12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 C19orf47Q8N9M1 422 aaKnown RBP12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 OR52B6Q8NGF0 335 aa12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 PRAP1Q96NZ9 151 aa12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 TRMOQ9BU70 441 aa12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 NTMT1Q9BV86 223 aa12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 SARGQ9BW04 601 aa12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 KLHL25Q9H0H3 589 aa12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 NOL11Q9H8H0 719 aaKnown RBP12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 IPPKQ9H8X2 491 aa12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 FAM60AQ9NP50 221 aa12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 PILRAQ9UKJ1 303 aa12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 ANGPTL3Q9Y5C1 460 aa12.15□□□□□ -0.46
CHMP2A-206ENST00000600118 A0A1B0GTL3 188 aa12.14□□□□□ -0.47
CHMP2A-206ENST00000600118 A8MU76 341 aa12.14□□□□□ -0.47
CHMP2A-206ENST00000600118 TMX2-CTNND1H3BSU7 103 aa12.14□□□□□ -0.47
CHMP2A-206ENST00000600118 UBFD1O14562 309 aaKnown RBP12.14□□□□□ -0.47
CHMP2A-206ENST00000600118 HGSO14964 777 aaPredicted RBP12.14□□□□□ -0.47
CHMP2A-206ENST00000600118 CLGNO14967 610 aa12.14□□□□□ -0.47
CHMP2A-206ENST00000600118 NPHS1O60500 1241 aa12.14□□□□□ -0.47
CHMP2A-206ENST00000600118 CTSVO60911 334 aa12.14□□□□□ -0.47
CHMP2A-206ENST00000600118 H2AFYO75367 372 aaKnown RBP12.14□□□□□ -0.47
CHMP2A-206ENST00000600118 CSO75390 466 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms