RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 KLK4Q9Y5K2 254 aa18.88■□□□□ 0.61
SHKBP1-214ENST00000597396 SEC16AO15027 2179 aa18.88■□□□□ 0.61
SHKBP1-214ENST00000597396 OR2A25A4D2G3 310 aa18.87■□□□□ 0.61
SHKBP1-214ENST00000597396 E7EQ34 232 aa18.87■□□□□ 0.61
SHKBP1-214ENST00000597396 OR2B3O76000 313 aa18.87■□□□□ 0.61
SHKBP1-214ENST00000597396 KLHL2O95198 593 aa18.87■□□□□ 0.61
SHKBP1-214ENST00000597396 SHBGP04278 402 aa18.87■□□□□ 0.61
SHKBP1-214ENST00000597396 TUBBP07437 444 aa18.87■□□□□ 0.61
SHKBP1-214ENST00000597396 MAGEA12P43365 314 aa18.87■□□□□ 0.61
SHKBP1-214ENST00000597396 GLRBP48167 497 aa18.87■□□□□ 0.61
SHKBP1-214ENST00000597396 GABRA4P48169 554 aa18.87■□□□□ 0.61
SHKBP1-214ENST00000597396 CLN3Q13286 438 aa18.87■□□□□ 0.61
SHKBP1-214ENST00000597396 TGIF1Q15583 401 aa18.87■□□□□ 0.61
SHKBP1-214ENST00000597396 ISCA2Q86U28 154 aa18.87■□□□□ 0.61
SHKBP1-214ENST00000597396 MCATQ8IVS2 390 aaKnown RBP18.87■□□□□ 0.61
SHKBP1-214ENST00000597396 CACNA2D3Q8IZS8 1091 aa18.87■□□□□ 0.61
SHKBP1-214ENST00000597396 NLGN4XQ8N0W4 816 aa18.87■□□□□ 0.61
SHKBP1-214ENST00000597396 CNPY4Q8N129 248 aa18.87■□□□□ 0.61
SHKBP1-214ENST00000597396 TCAIMQ8N3R3 496 aa18.87■□□□□ 0.61
SHKBP1-214ENST00000597396 NLGN4YQ8NFZ3 816 aaPredicted RBP18.87■□□□□ 0.61
SHKBP1-214ENST00000597396 RHBDF1Q96CC6 855 aa18.87■□□□□ 0.61
SHKBP1-214ENST00000597396 PLCD4Q9BRC7 762 aa18.87■□□□□ 0.61
SHKBP1-214ENST00000597396 PPCSQ9HAB8 311 aa18.87■□□□□ 0.61
SHKBP1-214ENST00000597396 CUEDC1Q9NWM3 386 aaPredicted RBP18.87■□□□□ 0.61
SHKBP1-214ENST00000597396 EURLQ9NYK6 297 aa18.87■□□□□ 0.61
SHKBP1-214ENST00000597396 WWOXQ9NZC7 414 aa18.87■□□□□ 0.61
SHKBP1-214ENST00000597396 TBK1Q9UHD2 729 aa18.87■□□□□ 0.61
SHKBP1-214ENST00000597396 PILRAQ9UKJ1 303 aa18.87■□□□□ 0.61
SHKBP1-214ENST00000597396 LAMA5O15230 3695 aa18.87■□□□□ 0.61
SHKBP1-214ENST00000597396 A0A0J9YVX5 310 aa18.86■□□□□ 0.61
SHKBP1-214ENST00000597396 SUPT3HB4E1H0 165 aa18.86■□□□□ 0.61
SHKBP1-214ENST00000597396 HCRTR1O43613 425 aa18.86■□□□□ 0.61
SHKBP1-214ENST00000597396 CTSVO60911 334 aa18.86■□□□□ 0.61
SHKBP1-214ENST00000597396 KERAO60938 352 aa18.86■□□□□ 0.61
SHKBP1-214ENST00000597396 CPNE3O75131 537 aaKnown RBP18.86■□□□□ 0.61
SHKBP1-214ENST00000597396 SUPT3HO75486 399 aa18.86■□□□□ 0.61
SHKBP1-214ENST00000597396 DLGAP3O95886 979 aa18.86■□□□□ 0.61
SHKBP1-214ENST00000597396 NTRK1P04629 796 aa18.86■□□□□ 0.61
SHKBP1-214ENST00000597396 HRH2P25021 359 aa18.86■□□□□ 0.61
SHKBP1-214ENST00000597396 ZXDCQ2QGD7 858 aaPredicted RBP18.86■□□□□ 0.61
SHKBP1-214ENST00000597396 PTCHD3Q3KNS1 767 aa18.86■□□□□ 0.61
SHKBP1-214ENST00000597396 CDKL4Q5MAI5 379 aa18.86■□□□□ 0.61
SHKBP1-214ENST00000597396 SULT1C3Q6IMI6 304 aa18.86■□□□□ 0.61
SHKBP1-214ENST00000597396 C6orf15Q6UXA7 325 aaPredicted RBP18.86■□□□□ 0.61
SHKBP1-214ENST00000597396 PAQR7Q86WK9 346 aa18.86■□□□□ 0.61
SHKBP1-214ENST00000597396 DTX1Q86Y01 620 aa18.86■□□□□ 0.61
SHKBP1-214ENST00000597396 SPACA3Q8IXA5 215 aa18.86■□□□□ 0.61
SHKBP1-214ENST00000597396 ESX1Q8N693 406 aa18.86■□□□□ 0.61
SHKBP1-214ENST00000597396 IL22RA1Q8N6P7 574 aa18.86■□□□□ 0.61
SHKBP1-214ENST00000597396 GALNT6Q8NCL4 622 aa18.86■□□□□ 0.61
SHKBP1-214ENST00000597396 CAVIN3Q969G5 261 aa18.86■□□□□ 0.61
SHKBP1-214ENST00000597396 CABS1Q96KC9 395 aa18.86■□□□□ 0.61
SHKBP1-214ENST00000597396 SELENOSQ9BQE4 189 aa18.86■□□□□ 0.61
SHKBP1-214ENST00000597396 SPRY4Q9C004 299 aa18.86■□□□□ 0.61
SHKBP1-214ENST00000597396 NUDT4Q9NZJ9 180 aa18.86■□□□□ 0.61
SHKBP1-214ENST00000597396 DYRK1BQ9Y463 629 aa18.86■□□□□ 0.61
SHKBP1-214ENST00000597396 FER1L5A0AVI2 2057 aa18.85■□□□□ 0.61
SHKBP1-214ENST00000597396 IGKV1-8A0A0C4DH67 115 aa18.85■□□□□ 0.61
SHKBP1-214ENST00000597396 TEX51A0A1B0GUA7 166 aa18.85■□□□□ 0.61
SHKBP1-214ENST00000597396 SMIM23A6NLE4 172 aa18.85■□□□□ 0.61
SHKBP1-214ENST00000597396 H7BY64 318 aa18.85■□□□□ 0.61
SHKBP1-214ENST00000597396 NRP2O60462 931 aa18.85■□□□□ 0.61
SHKBP1-214ENST00000597396 MT-ND3P03897 115 aa18.85■□□□□ 0.61
SHKBP1-214ENST00000597396 SLCO1A2P46721 670 aa18.85■□□□□ 0.61
SHKBP1-214ENST00000597396 MAP7Q14244 749 aa18.85■□□□□ 0.61
SHKBP1-214ENST00000597396 NAA30Q147X3 362 aaPredicted RBP18.85■□□□□ 0.61
SHKBP1-214ENST00000597396 ACAP2Q15057 778 aa18.85■□□□□ 0.61
SHKBP1-214ENST00000597396 TSNAXIP1Q2TAA8 658 aa18.85■□□□□ 0.61
SHKBP1-214ENST00000597396 MANEAQ5SRI9 462 aa18.85■□□□□ 0.61
SHKBP1-214ENST00000597396 PRAMEF17Q5VTA0 474 aa18.85■□□□□ 0.61
SHKBP1-214ENST00000597396 BROXQ5VW32 411 aa18.85■□□□□ 0.61
SHKBP1-214ENST00000597396 ZNF425Q6IV72 752 aa18.85■□□□□ 0.61
SHKBP1-214ENST00000597396 RNF44Q7L0R7 432 aa18.85■□□□□ 0.61
SHKBP1-214ENST00000597396 TIPARPQ7Z3E1 657 aaKnown RBP18.85■□□□□ 0.61
SHKBP1-214ENST00000597396 THOC6Q86W42 341 aaKnown RBP18.85■□□□□ 0.61
SHKBP1-214ENST00000597396 NKD1Q969G9 470 aa18.85■□□□□ 0.61
SHKBP1-214ENST00000597396 CLIP3Q96DZ5 547 aa18.85■□□□□ 0.61
SHKBP1-214ENST00000597396 SCYL1Q96KG9 808 aa18.85■□□□□ 0.61
SHKBP1-214ENST00000597396 PRAP1Q96NZ9 151 aa18.85■□□□□ 0.61
SHKBP1-214ENST00000597396 ATOH8Q96SQ7 321 aa18.85■□□□□ 0.61
SHKBP1-214ENST00000597396 ZFYVE21Q9BQ24 234 aa18.85■□□□□ 0.61
SHKBP1-214ENST00000597396 SPRTNQ9H040 489 aaPredicted RBP18.85■□□□□ 0.61
SHKBP1-214ENST00000597396 CNOT10Q9H9A5 744 aaKnown RBP18.85■□□□□ 0.61
SHKBP1-214ENST00000597396 ACTR5Q9H9F9 607 aaPredicted RBP18.85■□□□□ 0.61
SHKBP1-214ENST00000597396 PCMTD2Q9NV79 361 aa18.85■□□□□ 0.61
SHKBP1-214ENST00000597396 TMEM184CQ9NVA4 438 aa18.85■□□□□ 0.61
SHKBP1-214ENST00000597396 RAB21Q9UL25 225 aa18.85■□□□□ 0.61
SHKBP1-214ENST00000597396 SH2B3Q9UQQ2 575 aa18.85■□□□□ 0.61
SHKBP1-214ENST00000597396 PCDHB3Q9Y5E6 796 aa18.85■□□□□ 0.61
SHKBP1-214ENST00000597396 A0A087WV48 116 aa18.84■□□□□ 0.61
SHKBP1-214ENST00000597396 CCDC189A1A4V9 331 aa18.84■□□□□ 0.61
SHKBP1-214ENST00000597396 SYCE1LA8MT33 242 aa18.84■□□□□ 0.61
SHKBP1-214ENST00000597396 ZNF749O43361 778 aa18.84■□□□□ 0.61
SHKBP1-214ENST00000597396 WDR47O94967 919 aa18.84■□□□□ 0.61
SHKBP1-214ENST00000597396 HBQ1P09105 142 aa18.84■□□□□ 0.61
SHKBP1-214ENST00000597396 CCNYL3P0C7X3 344 aa18.84■□□□□ 0.61
SHKBP1-214ENST00000597396 COL6A2P12110 1019 aa18.84■□□□□ 0.61
SHKBP1-214ENST00000597396 CDH1P12830 882 aa18.84■□□□□ 0.61
SHKBP1-214ENST00000597396 EZRP15311 586 aaKnown RBP18.84■□□□□ 0.61
SHKBP1-214ENST00000597396 NPPBP16860 134 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms