RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 E2F2Q14209 437 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 SF1Q15637 639 aaKnown RBP14.12□□□□□ -0.15
VRK3-212ENST00000596814 PAGE2BQ5JRK9 111 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 VWA5B1Q5TIE3 1220 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 DDIASQ8IXT1 998 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 CACNA2D3Q8IZS8 1091 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 SUMF1Q8NBK3 374 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 CCDC197Q8NCU1 140 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 OR2L3Q8NG85 312 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 C19orf60Q96EN9 201 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 PRR11Q96HE9 360 aaPredicted RBP14.12□□□□□ -0.15
VRK3-212ENST00000596814 SEC16BQ96JE7 1060 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 PPP1R36Q96LQ0 422 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 EFCAB11Q9BUY7 163 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 PELI2Q9HAT8 420 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 MRPS30Q9NP92 439 aaKnown RBP14.12□□□□□ -0.15
VRK3-212ENST00000596814 CUEDC1Q9NWM3 386 aaPredicted RBP14.12□□□□□ -0.15
VRK3-212ENST00000596814 ACTR10Q9NZ32 417 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.12□□□□□ -0.15
VRK3-212ENST00000596814 BTRCQ9Y297 605 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 ENTPD2Q9Y5L3 495 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 RNF215Q9Y6U7 377 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 HEATR5BQ9P2D3 2071 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 OR5K3A6NET4 321 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 C2orf74A8MZ97 194 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 TRIM38O00635 465 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 PIP5K1BO14986 540 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 NUDT21O43809 227 aaKnown RBP14.12□□□□□ -0.15
VRK3-212ENST00000596814 UBXN7O94888 489 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 KRT6AP02538 564 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 KRT6BP04259 564 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 GLB1P16278 677 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 CMPK1P30085 196 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 KRT6CP48668 564 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 HTR6P50406 440 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 INHBCP55103 352 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 YBX1P67809 324 aaKnown RBP14.12□□□□□ -0.15
VRK3-212ENST00000596814 SLBPQ14493 270 aaKnown RBP eCLIP14.12□□□□□ -0.15
VRK3-212ENST00000596814 ZRSR2Q15696 482 aaKnown RBP14.12□□□□□ -0.15
VRK3-212ENST00000596814 SLC9B1Q4ZJI4 515 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 KLHL35Q6PF15 583 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 EPGNQ6UW88 154 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 ABHD11Q8NFV4 315 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 RSC1A1Q92681 617 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 EBF4Q9BQW3 602 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 ELOVL6Q9H5J4 265 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 MEAF6Q9HAF1 191 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 HRASLS2Q9NWW9 162 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 LRIT1Q9P2V4 623 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 SNX6Q9UNH7 406 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 ARL2BPQ9Y2Y0 163 aa14.12□□□□□ -0.15
VRK3-212ENST00000596814 DMDP11532 3685 aa14.11□□□□□ -0.15
VRK3-212ENST00000596814 LNP1A1A4G5 178 aa14.11□□□□□ -0.15
VRK3-212ENST00000596814 MANBAO00462 879 aa14.11□□□□□ -0.15
VRK3-212ENST00000596814 UGT2B7P16662 529 aa14.11□□□□□ -0.15
VRK3-212ENST00000596814 TYRP1P17643 537 aa14.11□□□□□ -0.15
VRK3-212ENST00000596814 AMD1P17707 334 aa14.11□□□□□ -0.15
VRK3-212ENST00000596814 IDH3AP50213 366 aa14.11□□□□□ -0.15
VRK3-212ENST00000596814 CCR8P51685 355 aa14.11□□□□□ -0.15
VRK3-212ENST00000596814 EPHA4P54764 986 aa14.11□□□□□ -0.15
VRK3-212ENST00000596814 IFT88Q13099 833 aa14.11□□□□□ -0.15
VRK3-212ENST00000596814 LAPTM5Q13571 262 aa14.11□□□□□ -0.15
VRK3-212ENST00000596814 ARMC6Q6NXE6 501 aa14.11□□□□□ -0.15
VRK3-212ENST00000596814 FAM20CQ8IXL6 584 aa14.11□□□□□ -0.15
VRK3-212ENST00000596814 ANKS4BQ8N8V4 417 aa14.11□□□□□ -0.15
VRK3-212ENST00000596814 FLVCR1-AS1Q8TAF5 88 aa14.11□□□□□ -0.15
VRK3-212ENST00000596814 STON2Q8WXE9 905 aa14.11□□□□□ -0.15
VRK3-212ENST00000596814 CCT6BQ92526 530 aa14.11□□□□□ -0.15
VRK3-212ENST00000596814 OR2A14Q96R47 310 aa14.11□□□□□ -0.15
VRK3-212ENST00000596814 TUBB1Q9H4B7 451 aa14.11□□□□□ -0.15
VRK3-212ENST00000596814 SLC6A20Q9NP91 592 aa14.11□□□□□ -0.15
VRK3-212ENST00000596814 PFDN4Q9NQP4 134 aa14.11□□□□□ -0.15
VRK3-212ENST00000596814 GEMIN8Q9NWZ8 242 aaKnown RBP14.11□□□□□ -0.15
VRK3-212ENST00000596814 APOBEC2Q9Y235 224 aaKnown RBP14.11□□□□□ -0.15
VRK3-212ENST00000596814 PTGDR2Q9Y5Y4 395 aa14.11□□□□□ -0.15
VRK3-212ENST00000596814 H0YIV9 168 aa14.1□□□□□ -0.15
VRK3-212ENST00000596814 SDHDO14521 159 aa14.1□□□□□ -0.15
VRK3-212ENST00000596814 SIGLEC6O43699 453 aa14.1□□□□□ -0.15
VRK3-212ENST00000596814 ULK1O75385 1050 aa14.1□□□□□ -0.15
VRK3-212ENST00000596814 PROS1P07225 676 aa14.1□□□□□ -0.15
VRK3-212ENST00000596814 ZNF883P0CG24 379 aa14.1□□□□□ -0.15
VRK3-212ENST00000596814 EPHA3P29320 983 aa14.1□□□□□ -0.15
VRK3-212ENST00000596814 CAPZBP47756 277 aa14.1□□□□□ -0.15
VRK3-212ENST00000596814 REEP5Q00765 189 aa14.1□□□□□ -0.15
VRK3-212ENST00000596814 MEF2AQ02078 507 aaPredicted RBP14.1□□□□□ -0.15
VRK3-212ENST00000596814 NR0B2Q15466 257 aa14.1□□□□□ -0.15
VRK3-212ENST00000596814 HIST2H2ACQ16777 129 aaPredicted RBP14.1□□□□□ -0.15
VRK3-212ENST00000596814 SLC5A12Q1EHB4 618 aa14.1□□□□□ -0.15
VRK3-212ENST00000596814 FRG2Q64ET8 278 aa14.1□□□□□ -0.15
VRK3-212ENST00000596814 HIST2H2AA3Q6FI13 130 aa14.1□□□□□ -0.15
VRK3-212ENST00000596814 MED27Q6P2C8 311 aa14.1□□□□□ -0.15
VRK3-212ENST00000596814 SCIMPQ6UWF3 145 aa14.1□□□□□ -0.15
VRK3-212ENST00000596814 RNF165Q6ZSG1 346 aa14.1□□□□□ -0.15
VRK3-212ENST00000596814 ACAD11Q709F0 780 aa14.1□□□□□ -0.15
VRK3-212ENST00000596814 ZNF438Q7Z4V0 828 aa14.1□□□□□ -0.15
VRK3-212ENST00000596814 ADCK2Q7Z695 626 aa14.1□□□□□ -0.15
VRK3-212ENST00000596814 FAM129CQ86XR2 697 aa14.1□□□□□ -0.15
VRK3-212ENST00000596814 EID2Q8N6I1 236 aa14.1□□□□□ -0.15
VRK3-212ENST00000596814 FAM181AQ8N9Y4 354 aa14.1□□□□□ -0.15
VRK3-212ENST00000596814 SELENOMQ8WWX9 145 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms