RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 SNX6Q9UNH7 406 aa16.89■□□□□ 0.29
ARHGEF1-213ENST00000595897 DUSP11O75319 330 aaKnown RBP16.88■□□□□ 0.29
ARHGEF1-213ENST00000595897 MED26O95402 600 aa16.88■□□□□ 0.29
ARHGEF1-213ENST00000595897 SPNP16150 400 aa16.88■□□□□ 0.29
ARHGEF1-213ENST00000595897 MAPK1P28482 360 aa16.88■□□□□ 0.29
ARHGEF1-213ENST00000595897 CA5AP35218 305 aa16.88■□□□□ 0.29
ARHGEF1-213ENST00000595897 CSNK2BP67870 215 aa16.88■□□□□ 0.29
ARHGEF1-213ENST00000595897 ARF5P84085 180 aa16.88■□□□□ 0.29
ARHGEF1-213ENST00000595897 NFATC2Q13469 925 aa16.88■□□□□ 0.29
ARHGEF1-213ENST00000595897 C5orf22Q49AR2 442 aa16.88■□□□□ 0.29
ARHGEF1-213ENST00000595897 NCEH1Q6PIU2 408 aa16.88■□□□□ 0.29
ARHGEF1-213ENST00000595897 ZNF598Q86UK7 904 aaKnown RBP16.88■□□□□ 0.29
ARHGEF1-213ENST00000595897 PARP16Q8N5Y8 322 aa16.88■□□□□ 0.29
ARHGEF1-213ENST00000595897 MYDGFQ969H8 173 aa16.88■□□□□ 0.29
ARHGEF1-213ENST00000595897 SGIP1Q9BQI5 828 aa16.88■□□□□ 0.29
ARHGEF1-213ENST00000595897 EBPLQ9BY08 206 aa16.88■□□□□ 0.29
ARHGEF1-213ENST00000595897 UGT2A1Q9Y4X1 527 aa16.88■□□□□ 0.29
ARHGEF1-213ENST00000595897 DYRK3O43781 588 aa16.88■□□□□ 0.29
ARHGEF1-213ENST00000595897 KCNK5O95279 499 aa16.88■□□□□ 0.29
ARHGEF1-213ENST00000595897 PTTG1O95997 202 aa16.88■□□□□ 0.29
ARHGEF1-213ENST00000595897 RPLP0P05388 317 aaKnown RBP16.88■□□□□ 0.29
ARHGEF1-213ENST00000595897 HSMCR30P0CW71 290 aa16.88■□□□□ 0.29
ARHGEF1-213ENST00000595897 UGT2B10P36537 528 aa16.88■□□□□ 0.29
ARHGEF1-213ENST00000595897 IDH2P48735 452 aaKnown RBP16.88■□□□□ 0.29
ARHGEF1-213ENST00000595897 RPIAP49247 311 aa16.88■□□□□ 0.29
ARHGEF1-213ENST00000595897 CYP4F2P78329 520 aa16.88■□□□□ 0.29
ARHGEF1-213ENST00000595897 FAM189BP81408 668 aa16.88■□□□□ 0.29
ARHGEF1-213ENST00000595897 RNF165Q6ZSG1 346 aa16.88■□□□□ 0.29
ARHGEF1-213ENST00000595897 TESCQ96BS2 214 aa16.88■□□□□ 0.29
ARHGEF1-213ENST00000595897 APIPQ96GX9 242 aa16.88■□□□□ 0.29
ARHGEF1-213ENST00000595897 REXO4Q9GZR2 422 aaKnown RBP16.88■□□□□ 0.29
ARHGEF1-213ENST00000595897 FCF1Q9Y324 198 aaKnown RBP16.88■□□□□ 0.29
ARHGEF1-213ENST00000595897 CAB39Q9Y376 341 aaPredicted RBP16.88■□□□□ 0.29
ARHGEF1-213ENST00000595897 ZNF451Q9Y4E5 1061 aa16.88■□□□□ 0.29
ARHGEF1-213ENST00000595897 PCDHGA6Q9Y5G7 932 aa16.88■□□□□ 0.29
ARHGEF1-213ENST00000595897 A8MX80 341 aa16.87■□□□□ 0.29
ARHGEF1-213ENST00000595897 FAM47E-STBD1D6RA91 191 aa16.87■□□□□ 0.29
ARHGEF1-213ENST00000595897 C9P02748 559 aa16.87■□□□□ 0.29
ARHGEF1-213ENST00000595897 IRF1P10914 325 aa16.87■□□□□ 0.29
ARHGEF1-213ENST00000595897 AQP1P29972 269 aa16.87■□□□□ 0.29
ARHGEF1-213ENST00000595897 ZNF45Q02386 682 aa16.87■□□□□ 0.29
ARHGEF1-213ENST00000595897 NDUFA5Q16718 116 aa16.87■□□□□ 0.29
ARHGEF1-213ENST00000595897 SOWAHCQ53LP3 525 aaPredicted RBP16.87■□□□□ 0.29
ARHGEF1-213ENST00000595897 ARMC12Q5T9G4 340 aa16.87■□□□□ 0.29
ARHGEF1-213ENST00000595897 RSBN1Q5VWQ0 802 aaPredicted RBP16.87■□□□□ 0.29
ARHGEF1-213ENST00000595897 ATL1Q8WXF7 558 aa16.87■□□□□ 0.29
ARHGEF1-213ENST00000595897 ELMO1Q92556 727 aa16.87■□□□□ 0.29
ARHGEF1-213ENST00000595897 TM6SF2Q9BZW4 377 aa16.87■□□□□ 0.29
ARHGEF1-213ENST00000595897 ZFYVE1Q9HBF4 777 aa16.87■□□□□ 0.29
ARHGEF1-213ENST00000595897 A0A1B0GVM2 712 aa16.87■□□□□ 0.29
ARHGEF1-213ENST00000595897 MTMR11A4FU01 709 aa16.87■□□□□ 0.29
ARHGEF1-213ENST00000595897 MAGEB17A8MXT2 336 aa16.87■□□□□ 0.29
ARHGEF1-213ENST00000595897 UPK3BL1B0FP48 263 aa16.87■□□□□ 0.29
ARHGEF1-213ENST00000595897 UPK3BL2E5RIL1 263 aa16.87■□□□□ 0.29
ARHGEF1-213ENST00000595897 M0R082 166 aa16.87■□□□□ 0.29
ARHGEF1-213ENST00000595897 RPS3P23396 243 aaKnown RBP eCLIP16.87■□□□□ 0.298e-7■■■■■ 45.6
ARHGEF1-213ENST00000595897 NUDT6P53370 316 aa16.87■□□□□ 0.29
ARHGEF1-213ENST00000595897 COPZ1P61923 177 aa16.87■□□□□ 0.29
ARHGEF1-213ENST00000595897 DUOXA1Q1HG43 343 aa16.87■□□□□ 0.29
ARHGEF1-213ENST00000595897 PNCKQ6P2M8 343 aa16.87■□□□□ 0.29
ARHGEF1-213ENST00000595897 CCBE1Q6UXH8 406 aaPredicted RBP16.87■□□□□ 0.29
ARHGEF1-213ENST00000595897 EIF3MQ7L2H7 374 aaKnown RBP16.87■□□□□ 0.29
ARHGEF1-213ENST00000595897 ZZZ3Q8IYH5 903 aa16.87■□□□□ 0.29
ARHGEF1-213ENST00000595897 KBTBD8Q8NFY9 601 aa16.87■□□□□ 0.29
ARHGEF1-213ENST00000595897 HOXD1Q9GZZ0 328 aa16.87■□□□□ 0.29
ARHGEF1-213ENST00000595897 TPK1Q9H3S4 243 aa16.87■□□□□ 0.29
ARHGEF1-213ENST00000595897 SLC32A1Q9H598 525 aa16.87■□□□□ 0.29
ARHGEF1-213ENST00000595897 RNF167Q9H6Y7 350 aa16.87■□□□□ 0.29
ARHGEF1-213ENST00000595897 MOV10Q9HCE1 1003 aaKnown RBP16.87■□□□□ 0.29
ARHGEF1-213ENST00000595897 RGS17Q9UGC6 210 aaPredicted RBP16.87■□□□□ 0.29
ARHGEF1-213ENST00000595897 GJB5O95377 273 aa16.86■□□□□ 0.29
ARHGEF1-213ENST00000595897 APOA1P02647 267 aa16.86■□□□□ 0.29
ARHGEF1-213ENST00000595897 ITGA1P56199 1179 aa16.86■□□□□ 0.29
ARHGEF1-213ENST00000595897 DEFA1P59665 94 aa16.86■□□□□ 0.29
ARHGEF1-213ENST00000595897 DEFA3P59666 94 aa16.86■□□□□ 0.29
ARHGEF1-213ENST00000595897 DSC1Q08554 894 aa16.86■□□□□ 0.29
ARHGEF1-213ENST00000595897 GPRC6AQ5T6X5 926 aa16.86■□□□□ 0.29
ARHGEF1-213ENST00000595897 ERICH5Q6P6B1 374 aa16.86■□□□□ 0.29
ARHGEF1-213ENST00000595897 RNF19BQ6ZMZ0 732 aa16.86■□□□□ 0.29
ARHGEF1-213ENST00000595897 METTL4Q8N3J2 472 aa16.86■□□□□ 0.29
ARHGEF1-213ENST00000595897 UBTD2Q8WUN7 234 aa16.86■□□□□ 0.29
ARHGEF1-213ENST00000595897 HRASLS5Q96KN8 279 aa16.86■□□□□ 0.29
ARHGEF1-213ENST00000595897 PITX2Q99697 317 aa16.86■□□□□ 0.29
ARHGEF1-213ENST00000595897 CHCHD6Q9BRQ6 235 aa16.86■□□□□ 0.29
ARHGEF1-213ENST00000595897 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.86■□□□□ 0.29
ARHGEF1-213ENST00000595897 GKN1Q9NS71 199 aa16.86■□□□□ 0.29
ARHGEF1-213ENST00000595897 GREB1Q4ZG55 1949 aa16.86■□□□□ 0.29
ARHGEF1-213ENST00000595897 CCNKO75909 580 aa16.86■□□□□ 0.29
ARHGEF1-213ENST00000595897 KRT8P05787 483 aa16.86■□□□□ 0.29
ARHGEF1-213ENST00000595897 HOXB9P17482 250 aaPredicted RBP16.86■□□□□ 0.29
ARHGEF1-213ENST00000595897 CORO1AP31146 461 aaKnown RBP16.86■□□□□ 0.29
ARHGEF1-213ENST00000595897 TBCEQ15813 527 aaPredicted RBP16.86■□□□□ 0.29
ARHGEF1-213ENST00000595897 C9orf131Q5VYM1 1079 aa16.86■□□□□ 0.29
ARHGEF1-213ENST00000595897 FAHD1Q6P587 224 aa16.86■□□□□ 0.29
ARHGEF1-213ENST00000595897 CBLL1Q75N03 491 aa16.86■□□□□ 0.29
ARHGEF1-213ENST00000595897 SYT12Q8IV01 421 aa16.86■□□□□ 0.29
ARHGEF1-213ENST00000595897 ADGRG2Q8IZP9 1017 aa16.86■□□□□ 0.29
ARHGEF1-213ENST00000595897 STX19Q8N4C7 294 aa16.86■□□□□ 0.29
ARHGEF1-213ENST00000595897 ZNF675Q8TD23 568 aa16.86■□□□□ 0.29
ARHGEF1-213ENST00000595897 ZNF486Q96H40 463 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms