RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 AP5B1Q2VPB7 878 aa20.05■□□□□ 0.8
PNKP-203ENST00000593946 PAGE2BQ5JRK9 111 aa20.05■□□□□ 0.8
PNKP-203ENST00000593946 MED27Q6P2C8 311 aa20.05■□□□□ 0.8
PNKP-203ENST00000593946 ASRGL1Q7L266 308 aa20.05■□□□□ 0.8
PNKP-203ENST00000593946 FAM129CQ86XR2 697 aa20.05■□□□□ 0.8
PNKP-203ENST00000593946 TRIM48Q8IWZ4 208 aa20.05■□□□□ 0.8
PNKP-203ENST00000593946 FNDC5Q8NAU1 212 aa20.05■□□□□ 0.8
PNKP-203ENST00000593946 DTWD2Q8NBA8 298 aa20.05■□□□□ 0.8
PNKP-203ENST00000593946 ABHD11Q8NFV4 315 aa20.05■□□□□ 0.8
PNKP-203ENST00000593946 OR2A1Q8NGT9 310 aa20.05■□□□□ 0.8
PNKP-203ENST00000593946 SLC37A2Q8TED4 501 aa20.05■□□□□ 0.8
PNKP-203ENST00000593946 LCN9Q8WX39 176 aa20.05■□□□□ 0.8
PNKP-203ENST00000593946 PELI2Q9HAT8 420 aa20.05■□□□□ 0.8
PNKP-203ENST00000593946 AIG1Q9NVV5 245 aa20.05■□□□□ 0.8
PNKP-203ENST00000593946 CPNE7Q9UBL6 633 aa20.05■□□□□ 0.8
PNKP-203ENST00000593946 PCDHB11Q9Y5F2 797 aa20.05■□□□□ 0.8
PNKP-203ENST00000593946 PIPSLA2A3N6 862 aa20.04■□□□□ 0.8
PNKP-203ENST00000593946 CD1EP15812 388 aa20.04■□□□□ 0.8
PNKP-203ENST00000593946 PRPH2P23942 346 aa20.04■□□□□ 0.8
PNKP-203ENST00000593946 DIO3P55073 304 aa20.04■□□□□ 0.8
PNKP-203ENST00000593946 C21orf59P57076 290 aa20.04■□□□□ 0.8
PNKP-203ENST00000593946 HNRNPKP61978 463 aaKnown RBP eCLIP20.04■□□□□ 0.8
PNKP-203ENST00000593946 EMX2Q04743 252 aa20.04■□□□□ 0.8
PNKP-203ENST00000593946 CSTF3Q12996 717 aaKnown RBP20.04■□□□□ 0.8
PNKP-203ENST00000593946 LAPTM5Q13571 262 aa20.04■□□□□ 0.8
PNKP-203ENST00000593946 C10orf62Q5T681 223 aaPredicted RBP20.04■□□□□ 0.8
PNKP-203ENST00000593946 ICE2Q659A1 982 aa20.04■□□□□ 0.8
PNKP-203ENST00000593946 AMIGO1Q86WK6 493 aa20.04■□□□□ 0.8
PNKP-203ENST00000593946 SFTPA2Q8IWL1 248 aa20.04■□□□□ 0.8
PNKP-203ENST00000593946 LAS2Q8IYD9 372 aa20.04■□□□□ 0.8
PNKP-203ENST00000593946 POU5F2Q8N7G0 328 aa20.04■□□□□ 0.8
PNKP-203ENST00000593946 FAM46DQ8NEK8 389 aa20.04■□□□□ 0.8
PNKP-203ENST00000593946 BRINP2Q9C0B6 783 aa20.04■□□□□ 0.8
PNKP-203ENST00000593946 TWSG1Q9GZX9 223 aa20.04■□□□□ 0.8
PNKP-203ENST00000593946 SPNS1Q9H2V7 528 aa20.04■□□□□ 0.8
PNKP-203ENST00000593946 SDR39U1Q9NRG7 319 aaPredicted RBP20.04■□□□□ 0.8
PNKP-203ENST00000593946 FBXO4Q9UKT5 387 aa20.04■□□□□ 0.8
PNKP-203ENST00000593946 GPR45Q9Y5Y3 372 aa20.04■□□□□ 0.8
PNKP-203ENST00000593946 GOLGA4Q13439 2230 aaKnown RBP20.03■□□□□ 0.8
PNKP-203ENST00000593946 PSMD12O00232 456 aaPredicted RBP20.03■□□□□ 0.8
PNKP-203ENST00000593946 RSL1D1O76021 490 aaKnown RBP20.03■□□□□ 0.8
PNKP-203ENST00000593946 VIPP01282 170 aa20.03■□□□□ 0.8
PNKP-203ENST00000593946 COX4I1P13073 169 aa20.03■□□□□ 0.8
PNKP-203ENST00000593946 GPX3P22352 226 aa20.03■□□□□ 0.8
PNKP-203ENST00000593946 PEBP1P30086 187 aaKnown RBP20.03■□□□□ 0.8
PNKP-203ENST00000593946 DHPSP49366 369 aaPredicted RBP20.03■□□□□ 0.8
PNKP-203ENST00000593946 RASSF2P50749 326 aa20.03■□□□□ 0.8
PNKP-203ENST00000593946 STX1BP61266 288 aa20.03■□□□□ 0.8
PNKP-203ENST00000593946 PRDX1Q06830 199 aaKnown RBP20.03■□□□□ 0.8
PNKP-203ENST00000593946 ACTN3Q08043 901 aaPredicted RBP20.03■□□□□ 0.8
PNKP-203ENST00000593946 GPR18Q14330 331 aa20.03■□□□□ 0.8
PNKP-203ENST00000593946 HERC3Q15034 1050 aa20.03■□□□□ 0.8
PNKP-203ENST00000593946 RFTN2Q52LD8 501 aaPredicted RBP20.03■□□□□ 0.8
PNKP-203ENST00000593946 ZDHHC1Q8WTX9 485 aa20.03■□□□□ 0.8
PNKP-203ENST00000593946 JPH3Q8WXH2 748 aaPredicted RBP20.03■□□□□ 0.8
PNKP-203ENST00000593946 REPS1Q96D71 796 aa20.03■□□□□ 0.8
PNKP-203ENST00000593946 C1orf50Q9BV19 199 aa20.03■□□□□ 0.8
PNKP-203ENST00000593946 LRMDAQ9H2I8 198 aa20.03■□□□□ 0.8
PNKP-203ENST00000593946 BRF2Q9HAW0 419 aa20.03■□□□□ 0.8
PNKP-203ENST00000593946 LRTM1Q9HBL6 345 aa20.03■□□□□ 0.8
PNKP-203ENST00000593946 CUEDC1Q9NWM3 386 aaPredicted RBP20.03■□□□□ 0.8
PNKP-203ENST00000593946 C1orf109Q9NX04 203 aa20.03■□□□□ 0.8
PNKP-203ENST00000593946 SPASTQ9UBP0 616 aa20.03■□□□□ 0.8
PNKP-203ENST00000593946 MDC1Q14676 2089 aaKnown RBP20.02■□□□□ 0.8
PNKP-203ENST00000593946 HSD3B1P14060 373 aa20.02■□□□□ 0.8
PNKP-203ENST00000593946 HSD3B2P26439 372 aa20.02■□□□□ 0.8
PNKP-203ENST00000593946 CPA2P48052 419 aa20.02■□□□□ 0.8
PNKP-203ENST00000593946 ACADVLP49748 655 aa20.02■□□□□ 0.8
PNKP-203ENST00000593946 TEAD4Q15561 434 aa20.02■□□□□ 0.8
PNKP-203ENST00000593946 KIF19Q2TAC6 998 aa20.02■□□□□ 0.8
PNKP-203ENST00000593946 PLK5Q496M5 336 aa20.02■□□□□ 0.8
PNKP-203ENST00000593946 ZFAND4Q86XD8 727 aa20.02■□□□□ 0.8
PNKP-203ENST00000593946 GKN2Q86XP6 184 aa20.02■□□□□ 0.8
PNKP-203ENST00000593946 ADGRF3Q8IZF5 1079 aa20.02■□□□□ 0.8
PNKP-203ENST00000593946 RNF175Q8N4F7 328 aa20.02■□□□□ 0.8
PNKP-203ENST00000593946 ZNF548Q8NEK5 533 aaPredicted RBP20.02■□□□□ 0.8
PNKP-203ENST00000593946 OR4E2Q8NGC2 313 aa20.02■□□□□ 0.8
PNKP-203ENST00000593946 OR4K1Q8NGD4 311 aa20.02■□□□□ 0.8
PNKP-203ENST00000593946 LMX1AQ8TE12 382 aa20.02■□□□□ 0.8
PNKP-203ENST00000593946 MTERF1Q99551 399 aaKnown RBP20.02■□□□□ 0.8
PNKP-203ENST00000593946 SRMSQ9H3Y6 488 aa20.02■□□□□ 0.8
PNKP-203ENST00000593946 SPHK1Q9NYA1 384 aa20.02■□□□□ 0.8
PNKP-203ENST00000593946 TSC22D4Q9Y3Q8 395 aa20.02■□□□□ 0.8
PNKP-203ENST00000593946 CABIN1Q9Y6J0 2220 aa20.02■□□□□ 0.8
PNKP-203ENST00000593946 A0A1B0GTW7 788 aa20.02■□□□□ 0.79
PNKP-203ENST00000593946 DNAJC8O75937 253 aaPredicted RBP20.02■□□□□ 0.79
PNKP-203ENST00000593946 CHRM5P08912 532 aaPredicted RBP20.02■□□□□ 0.79
PNKP-203ENST00000593946 PTPN4P29074 926 aa20.02■□□□□ 0.79
PNKP-203ENST00000593946 CCR8P51685 355 aa20.02■□□□□ 0.79
PNKP-203ENST00000593946 RPL38P63173 70 aaKnown RBP20.02■□□□□ 0.79
PNKP-203ENST00000593946 MEF2AQ02078 507 aaPredicted RBP20.02■□□□□ 0.79
PNKP-203ENST00000593946 GRIK2Q13002 908 aa20.02■□□□□ 0.79
PNKP-203ENST00000593946 HIST2H2ACQ16777 129 aaPredicted RBP20.02■□□□□ 0.79
PNKP-203ENST00000593946 HIST2H2AA3Q6FI13 130 aa20.02■□□□□ 0.79
PNKP-203ENST00000593946 ADNP2Q6IQ32 1131 aa20.02■□□□□ 0.79
PNKP-203ENST00000593946 MIER2Q8N344 545 aa20.02■□□□□ 0.79
PNKP-203ENST00000593946 SDR16C5Q8N3Y7 309 aa20.02■□□□□ 0.79
PNKP-203ENST00000593946 ZNF740Q8NDX6 193 aa20.02■□□□□ 0.79
PNKP-203ENST00000593946 HUS1BQ8NHY5 278 aa20.02■□□□□ 0.79
PNKP-203ENST00000593946 RP9Q8TA86 221 aaKnown RBP20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms