RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 CDH3P22223 829 aa18.93■□□□□ 0.62
LSM4-203ENST00000593829 ARFIP2P53365 341 aa18.93■□□□□ 0.62
LSM4-203ENST00000593829 MXRA7P84157 204 aa18.93■□□□□ 0.62
LSM4-203ENST00000593829 SLC18A2Q05940 514 aa18.93■□□□□ 0.62
LSM4-203ENST00000593829 USP10Q14694 798 aaKnown RBP18.93■□□□□ 0.62
LSM4-203ENST00000593829 KIR2DS3Q14952 304 aa18.93■□□□□ 0.62
LSM4-203ENST00000593829 SPESP1Q6UW49 350 aa18.93■□□□□ 0.62
LSM4-203ENST00000593829 RASGRP3Q8IV61 690 aa18.93■□□□□ 0.62
LSM4-203ENST00000593829 ARHGAP24Q8N264 748 aa18.93■□□□□ 0.62
LSM4-203ENST00000593829 BMPERQ8N8U9 685 aa18.93■□□□□ 0.62
LSM4-203ENST00000593829 LINC01555Q8NAE3 123 aa18.93■□□□□ 0.62
LSM4-203ENST00000593829 TSPAN17Q96FV3 270 aa18.93■□□□□ 0.62
LSM4-203ENST00000593829 CNTNAP3BQ96NU0 1288 aa18.93■□□□□ 0.62
LSM4-203ENST00000593829 CNTNAP3Q9BZ76 1288 aa18.93■□□□□ 0.62
LSM4-203ENST00000593829 TWSG1Q9GZX9 223 aa18.93■□□□□ 0.62
LSM4-203ENST00000593829 POPDC3Q9HBV1 291 aa18.93■□□□□ 0.62
LSM4-203ENST00000593829 SYTL2Q9HCH5 934 aa18.93■□□□□ 0.62
LSM4-203ENST00000593829 ARL8BQ9NVJ2 186 aa18.93■□□□□ 0.62
LSM4-203ENST00000593829 HEY2Q9UBP5 337 aa18.93■□□□□ 0.62
LSM4-203ENST00000593829 ASPMQ8IZT6 3477 aa18.93■□□□□ 0.62
LSM4-203ENST00000593829 ISM1B1AKI9 464 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 UGT2B7P16662 529 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 ZNF37AP17032 561 aaPredicted RBP18.92■□□□□ 0.62
LSM4-203ENST00000593829 PEX19P40855 299 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 ETV4P43268 484 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 ARL4DP49703 201 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 RAP1GDS1P52306 607 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 TBC1D25Q3MII6 688 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 TMEM164Q5U3C3 297 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 ANKS6Q68DC2 871 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 CEP97Q8IW35 865 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 ZCCHC14Q8WYQ9 949 aaKnown RBP18.92■□□□□ 0.62
LSM4-203ENST00000593829 PDLIM5Q96HC4 596 aaKnown RBP18.92■□□□□ 0.62
LSM4-203ENST00000593829 SLC41A2Q96JW4 573 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 PPM1MQ96MI6 270 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 TRAPPC9Q96Q05 1148 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 OR2A14Q96R47 310 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 TAAR9Q96RI9 348 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 TSC22D3Q99576 134 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 KCNK13Q9HB14 408 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.92■□□□□ 0.62
LSM4-203ENST00000593829 SLC39A1Q9NY26 324 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 CHD8Q9HCK8 2581 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 ANKRD33BA6NCL7 494 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 KRT87PA6NCN2 255 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 CDRT15L2A8MXV6 281 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 H0Y3Z8 333 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 SLC16A5O15375 505 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 GYG2O15488 501 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 PSMG1O95456 288 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 ZBTB11O95625 1053 aaPredicted RBP18.92■□□□□ 0.62
LSM4-203ENST00000593829 HSD11B2P80365 405 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 MC2RQ01718 297 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 SP140Q13342 867 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 ZNF460Q14592 562 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 TMEM154Q6P9G4 183 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 TMEM207Q6UWW9 146 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 CLEC14AQ86T13 490 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 NKAPQ8N5F7 415 aaKnown RBP18.92■□□□□ 0.62
LSM4-203ENST00000593829 C2orf73Q8N5S3 287 aaPredicted RBP18.92■□□□□ 0.62
LSM4-203ENST00000593829 KDF1Q8NAX2 398 aaPredicted RBP18.92■□□□□ 0.62
LSM4-203ENST00000593829 HMGCLL1Q8TB92 370 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 USP7Q93009 1102 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 SLC22A18Q96BI1 424 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 MRRFQ96E11 262 aaKnown RBP18.92■□□□□ 0.62
LSM4-203ENST00000593829 PKP4Q99569 1192 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 CAB39LQ9H9S4 337 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 GPAMQ9HCL2 828 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 PCDHGA7Q9Y5G6 932 aa18.92■□□□□ 0.62
LSM4-203ENST00000593829 IQANK1A0A1B0GTG1 560 aa18.91■□□□□ 0.62
LSM4-203ENST00000593829 CYP2A7P20853 494 aa18.91■□□□□ 0.62
LSM4-203ENST00000593829 HSD17B2P37059 387 aa18.91■□□□□ 0.62
LSM4-203ENST00000593829 ROR2Q01974 943 aaKnown RBP18.91■□□□□ 0.62
LSM4-203ENST00000593829 ARHGAP19Q14CB8 494 aa18.91■□□□□ 0.62
LSM4-203ENST00000593829 RCN1Q15293 331 aa18.91■□□□□ 0.62
LSM4-203ENST00000593829 CYP2A13Q16696 494 aa18.91■□□□□ 0.62
LSM4-203ENST00000593829 GSTA3Q16772 222 aa18.91■□□□□ 0.62
LSM4-203ENST00000593829 OR52E8Q6IFG1 317 aa18.91■□□□□ 0.62
LSM4-203ENST00000593829 LRRC74BQ6ZQY2 392 aa18.91■□□□□ 0.62
LSM4-203ENST00000593829 MCOLN3Q8TDD5 553 aa18.91■□□□□ 0.62
LSM4-203ENST00000593829 APOPT1Q96IL0 206 aa18.91■□□□□ 0.62
LSM4-203ENST00000593829 SLC12A9Q9BXP2 914 aa18.91■□□□□ 0.62
LSM4-203ENST00000593829 B3GNT4Q9C0J1 378 aa18.91■□□□□ 0.62
LSM4-203ENST00000593829 PARVBQ9HBI1 364 aa18.91■□□□□ 0.62
LSM4-203ENST00000593829 FBXO8Q9NRD0 319 aa18.91■□□□□ 0.62
LSM4-203ENST00000593829 SIDT1Q9NXL6 827 aaKnown RBP18.91■□□□□ 0.62
LSM4-203ENST00000593829 ADAMTS6Q9UKP5 1117 aa18.91■□□□□ 0.62
LSM4-203ENST00000593829 WDFY3Q8IZQ1 3526 aa18.9■□□□□ 0.62
LSM4-203ENST00000593829 SLC9B1P1A6NJY1 282 aa18.9■□□□□ 0.62
LSM4-203ENST00000593829 STMN1P16949 149 aa18.9■□□□□ 0.62
LSM4-203ENST00000593829 PEBP1P30086 187 aaKnown RBP18.9■□□□□ 0.62
LSM4-203ENST00000593829 RAB15P59190 212 aa18.9■□□□□ 0.62
LSM4-203ENST00000593829 SH2D5Q6ZV89 423 aa18.9■□□□□ 0.62
LSM4-203ENST00000593829 LMNTD1Q8N9Z9 388 aa18.9■□□□□ 0.62
LSM4-203ENST00000593829 FLVCR1-AS1Q8TAF5 88 aa18.9■□□□□ 0.62
LSM4-203ENST00000593829 DLG3Q92796 817 aa18.9■□□□□ 0.62
LSM4-203ENST00000593829 FGF11Q92914 225 aa18.9■□□□□ 0.62
LSM4-203ENST00000593829 CCDC28BQ9BUN5 200 aa18.9■□□□□ 0.62
LSM4-203ENST00000593829 ASPSCR1Q9BZE9 553 aa18.9■□□□□ 0.62
LSM4-203ENST00000593829 PCDHGA3Q9Y5H0 932 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms