RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 FOXL2P58012 376 aa17.68■□□□□ 0.42
SHKBP1-202ENST00000593764 SP140Q13342 867 aa17.68■□□□□ 0.42
SHKBP1-202ENST00000593764 SLC9A5Q14940 896 aa17.68■□□□□ 0.42
SHKBP1-202ENST00000593764 NAA25Q14CX7 972 aa17.68■□□□□ 0.42
SHKBP1-202ENST00000593764 ZXDCQ2QGD7 858 aaPredicted RBP17.68■□□□□ 0.42
SHKBP1-202ENST00000593764 YOD1Q5VVQ6 348 aaPredicted RBP17.68■□□□□ 0.42
SHKBP1-202ENST00000593764 ZDHHC24Q6UX98 284 aa17.68■□□□□ 0.42
SHKBP1-202ENST00000593764 DTWD1Q8N5C7 304 aa17.68■□□□□ 0.42
SHKBP1-202ENST00000593764 FBXO25Q8TCJ0 367 aa17.68■□□□□ 0.42
SHKBP1-202ENST00000593764 PDLIM5Q96HC4 596 aaKnown RBP17.68■□□□□ 0.42
SHKBP1-202ENST00000593764 ZFYVE21Q9BQ24 234 aa17.68■□□□□ 0.42
SHKBP1-202ENST00000593764 C17orf62Q9BQA9 187 aa17.68■□□□□ 0.42
SHKBP1-202ENST00000593764 IFT80Q9P2H3 777 aaPredicted RBP17.68■□□□□ 0.42
SHKBP1-202ENST00000593764 TLK1Q9UKI8 766 aa17.68■□□□□ 0.42
SHKBP1-202ENST00000593764 MDC1Q14676 2089 aaKnown RBP17.67■□□□□ 0.42
SHKBP1-202ENST00000593764 CXorf49A8MYA2 514 aaPredicted RBP17.67■□□□□ 0.42
SHKBP1-202ENST00000593764 H0YGG7 62 aa17.67■□□□□ 0.42
SHKBP1-202ENST00000593764 K7EM74 188 aa17.67■□□□□ 0.42
SHKBP1-202ENST00000593764 DNAJB5O75953 348 aa17.67■□□□□ 0.42
SHKBP1-202ENST00000593764 CCNDBP1O95273 360 aa17.67■□□□□ 0.42
SHKBP1-202ENST00000593764 C1QAP02745 245 aa17.67■□□□□ 0.42
SHKBP1-202ENST00000593764 ATXN8OSP0DMR3 200 aa17.67■□□□□ 0.42
SHKBP1-202ENST00000593764 ARF3P61204 181 aaPredicted RBP17.67■□□□□ 0.42
SHKBP1-202ENST00000593764 ABATP80404 500 aa17.67■□□□□ 0.42
SHKBP1-202ENST00000593764 RELAQ04206 551 aa17.67■□□□□ 0.42
SHKBP1-202ENST00000593764 PRTGQ2VWP7 1150 aa17.67■□□□□ 0.42
SHKBP1-202ENST00000593764 CPZQ66K79 652 aa17.67■□□□□ 0.42
SHKBP1-202ENST00000593764 CAPN12Q6ZSI9 719 aa17.67■□□□□ 0.42
SHKBP1-202ENST00000593764 CYS1Q717R9 158 aa17.67■□□□□ 0.42
SHKBP1-202ENST00000593764 PALM2Q8IXS6 379 aa17.67■□□□□ 0.42
SHKBP1-202ENST00000593764 C9orf43Q8TAL5 461 aaPredicted RBP17.67■□□□□ 0.42
SHKBP1-202ENST00000593764 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.67■□□□□ 0.42
SHKBP1-202ENST00000593764 OR2A5Q96R48 311 aa17.67■□□□□ 0.42
SHKBP1-202ENST00000593764 RAB17Q9H0T7 212 aa17.67■□□□□ 0.42
SHKBP1-202ENST00000593764 ZNF71Q9NQZ8 489 aaPredicted RBP17.67■□□□□ 0.42
SHKBP1-202ENST00000593764 ABCF3Q9NUQ8 709 aa17.67■□□□□ 0.42
SHKBP1-202ENST00000593764 CUEDC1Q9NWM3 386 aaPredicted RBP17.67■□□□□ 0.42
SHKBP1-202ENST00000593764 IKZF3Q9UKT9 509 aa17.67■□□□□ 0.42
SHKBP1-202ENST00000593764 PADI2Q9Y2J8 665 aa17.67■□□□□ 0.42
SHKBP1-202ENST00000593764 PCSK5Q92824 1860 aa17.67■□□□□ 0.42
SHKBP1-202ENST00000593764 HYKKA2RU49 373 aa17.66■□□□□ 0.42
SHKBP1-202ENST00000593764 RFPL1O75677 317 aa17.66■□□□□ 0.42
SHKBP1-202ENST00000593764 URI1O94763 535 aaPredicted RBP17.66■□□□□ 0.42
SHKBP1-202ENST00000593764 TAS2R39P59534 338 aa17.66■□□□□ 0.42
SHKBP1-202ENST00000593764 GPX6P59796 221 aa17.66■□□□□ 0.42
SHKBP1-202ENST00000593764 CAV1Q03135 178 aa17.66■□□□□ 0.42
SHKBP1-202ENST00000593764 CHAF1BQ13112 559 aa17.66■□□□□ 0.42
SHKBP1-202ENST00000593764 SSPNQ14714 243 aa17.66■□□□□ 0.42
SHKBP1-202ENST00000593764 FAM214AQ32MH5 1076 aa17.66■□□□□ 0.42
SHKBP1-202ENST00000593764 AGTRAPQ6RW13 159 aa17.66■□□□□ 0.42
SHKBP1-202ENST00000593764 C3orf62Q6ZUJ4 267 aa17.66■□□□□ 0.42
SHKBP1-202ENST00000593764 COX15Q7KZN9 410 aa17.66■□□□□ 0.42
SHKBP1-202ENST00000593764 OVCH1Q7RTY7 1134 aa17.66■□□□□ 0.42
SHKBP1-202ENST00000593764 TTC29Q8NA56 475 aaPredicted RBP17.66■□□□□ 0.42
SHKBP1-202ENST00000593764 OR2Y1Q8NGV0 311 aa17.66■□□□□ 0.42
SHKBP1-202ENST00000593764 LRRC1Q9BTT6 524 aa17.66■□□□□ 0.42
SHKBP1-202ENST00000593764 PHACTR1Q9C0D0 580 aa17.66■□□□□ 0.42
SHKBP1-202ENST00000593764 ATG10Q9H0Y0 220 aa17.66■□□□□ 0.42
SHKBP1-202ENST00000593764 ING2Q9H160 280 aa17.66■□□□□ 0.42
SHKBP1-202ENST00000593764 RHOJQ9H4E5 214 aa17.66■□□□□ 0.42
SHKBP1-202ENST00000593764 NDOR1Q9UHB4 597 aa17.66■□□□□ 0.42
SHKBP1-202ENST00000593764 GPN3Q9UHW5 284 aaPredicted RBP17.66■□□□□ 0.42
SHKBP1-202ENST00000593764 PTRH2Q9Y3E5 179 aaKnown RBP17.66■□□□□ 0.42
SHKBP1-202ENST00000593764 FAM95CA0A1B0GW59 222 aa17.65■□□□□ 0.42
SHKBP1-202ENST00000593764 TCRBV9S1A1TA0A576 114 aa17.65■□□□□ 0.42
SHKBP1-202ENST00000593764 ARGFXA6NJG6 315 aa17.65■□□□□ 0.42
SHKBP1-202ENST00000593764 H7BY64 318 aa17.65■□□□□ 0.42
SHKBP1-202ENST00000593764 HAT1O14929 419 aa17.65■□□□□ 0.42
SHKBP1-202ENST00000593764 SUV39H1O43463 412 aa17.65■□□□□ 0.42
SHKBP1-202ENST00000593764 EIF2S1P05198 315 aaKnown RBP17.65■□□□□ 0.42
SHKBP1-202ENST00000593764 UMODP07911 640 aa17.65■□□□□ 0.42
SHKBP1-202ENST00000593764 CD63P08962 238 aa17.65■□□□□ 0.42
SHKBP1-202ENST00000593764 EZRP15311 586 aaKnown RBP17.65■□□□□ 0.42
SHKBP1-202ENST00000593764 ZNF37AP17032 561 aaPredicted RBP17.65■□□□□ 0.42
SHKBP1-202ENST00000593764 TBPL1P62380 186 aa17.65■□□□□ 0.42
SHKBP1-202ENST00000593764 SLC7A5Q01650 507 aa17.65■□□□□ 0.42
SHKBP1-202ENST00000593764 CKAP4Q07065 602 aaKnown RBP17.65■□□□□ 0.42
SHKBP1-202ENST00000593764 NAE1Q13564 534 aa17.65■□□□□ 0.42
SHKBP1-202ENST00000593764 ZNF460Q14592 562 aa17.65■□□□□ 0.42
SHKBP1-202ENST00000593764 THEMIS2Q5TEJ8 643 aa17.65■□□□□ 0.42
SHKBP1-202ENST00000593764 TCTN3Q6NUS6 607 aa17.65■□□□□ 0.42
SHKBP1-202ENST00000593764 PTRH1Q86Y79 214 aaKnown RBP17.65■□□□□ 0.42
SHKBP1-202ENST00000593764 CEP97Q8IW35 865 aa17.65■□□□□ 0.42
SHKBP1-202ENST00000593764 ARHGEF39Q8N4T4 335 aa17.65■□□□□ 0.42
SHKBP1-202ENST00000593764 C10orf90Q96M02 699 aa17.65■□□□□ 0.42
SHKBP1-202ENST00000593764 PRAP1Q96NZ9 151 aa17.65■□□□□ 0.42
SHKBP1-202ENST00000593764 SGPP1Q9BX95 441 aa17.65■□□□□ 0.42
SHKBP1-202ENST00000593764 CCDC177Q9NQR7 707 aaPredicted RBP17.65■□□□□ 0.42
SHKBP1-202ENST00000593764 NSMCE4AQ9NXX6 385 aa17.65■□□□□ 0.42
SHKBP1-202ENST00000593764 SH2B3Q9UQQ2 575 aa17.65■□□□□ 0.42
SHKBP1-202ENST00000593764 TP53TG5Q9Y2B4 290 aa17.65■□□□□ 0.42
SHKBP1-202ENST00000593764 FAM159BA6NKW6 160 aa17.64■□□□□ 0.41
SHKBP1-202ENST00000593764 MKRN2OSH3BPM6 223 aa17.64■□□□□ 0.41
SHKBP1-202ENST00000593764 ALBP02768 609 aa17.64■□□□□ 0.41
SHKBP1-202ENST00000593764 NR1D1P20393 614 aa17.64■□□□□ 0.41
SHKBP1-202ENST00000593764 SAT1P21673 171 aa17.64■□□□□ 0.41
SHKBP1-202ENST00000593764 OR1D4P47884 311 aa17.64■□□□□ 0.41
SHKBP1-202ENST00000593764 EMP3P54852 163 aa17.64■□□□□ 0.41
SHKBP1-202ENST00000593764 ATP1A4Q13733 1029 aa17.64■□□□□ 0.41
SHKBP1-202ENST00000593764 PRAMEF13Q5VWM6 474 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms