RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 TSR3Q9UJK0 312 aaKnown RBP22.79■■□□□ 1.24
LSM4-202ENST00000593564 SOX13Q9UN79 622 aa22.79■■□□□ 1.24
LSM4-202ENST00000593564 CDC14AQ9UNH5 594 aa22.79■■□□□ 1.24
LSM4-202ENST00000593564 A0A1W2PQ72 361 aa22.78■■□□□ 1.24
LSM4-202ENST00000593564 ARHGEF33A8MVX0 844 aa22.78■■□□□ 1.24
LSM4-202ENST00000593564 GOLGA8KD6RF30 607 aa22.78■■□□□ 1.24
LSM4-202ENST00000593564 GOLGA8TH3BQL2 631 aa22.78■■□□□ 1.24
LSM4-202ENST00000593564 VPS26AO75436 327 aa22.78■■□□□ 1.24
LSM4-202ENST00000593564 USP1O94782 785 aa22.78■■□□□ 1.24
LSM4-202ENST00000593564 TPSB2P20231 275 aa22.78■■□□□ 1.24
LSM4-202ENST00000593564 DSG2Q14126 1118 aa22.78■■□□□ 1.24
LSM4-202ENST00000593564 ARHGAP19Q14CB8 494 aa22.78■■□□□ 1.24
LSM4-202ENST00000593564 TPSAB1Q15661 275 aa22.78■■□□□ 1.24
LSM4-202ENST00000593564 VWA2Q5GFL6 755 aa22.78■■□□□ 1.24
LSM4-202ENST00000593564 RPUSD3Q6P087 351 aaKnown RBP22.78■■□□□ 1.24
LSM4-202ENST00000593564 GAS2L3Q86XJ1 694 aa22.78■■□□□ 1.24
LSM4-202ENST00000593564 FAM136AQ96C01 138 aa22.78■■□□□ 1.24
LSM4-202ENST00000593564 TRIM56Q9BRZ2 755 aaKnown RBP22.78■■□□□ 1.24
LSM4-202ENST00000593564 MRPS30Q9NP92 439 aaKnown RBP22.78■■□□□ 1.24
LSM4-202ENST00000593564 FAM114A2Q9NRY5 505 aa22.78■■□□□ 1.24
LSM4-202ENST00000593564 DIDO1Q9BTC0 2240 aaKnown RBP22.78■■□□□ 1.24
LSM4-202ENST00000593564 PRPF4O43172 522 aaKnown RBP eCLIP22.77■■□□□ 1.24
LSM4-202ENST00000593564 PSIP1O75475 530 aaKnown RBP22.77■■□□□ 1.24
LSM4-202ENST00000593564 COX6A1P12074 109 aa22.77■■□□□ 1.24
LSM4-202ENST00000593564 CHRM3P20309 590 aa22.77■■□□□ 1.24
LSM4-202ENST00000593564 OGNP20774 298 aaKnown RBP22.77■■□□□ 1.24
LSM4-202ENST00000593564 FDXRP22570 491 aa22.77■■□□□ 1.24
LSM4-202ENST00000593564 RPA3P35244 121 aaPredicted RBP22.77■■□□□ 1.24
LSM4-202ENST00000593564 ACSBG2Q5FVE4 666 aa22.77■■□□□ 1.24
LSM4-202ENST00000593564 ARMC3Q5W041 872 aa22.77■■□□□ 1.24
LSM4-202ENST00000593564 KIAA0930Q6ICG6 404 aaPredicted RBP22.77■■□□□ 1.24
LSM4-202ENST00000593564 FAM180AQ6UWF9 173 aa22.77■■□□□ 1.24
LSM4-202ENST00000593564 SUSD1Q6UWL2 747 aa22.77■■□□□ 1.24
LSM4-202ENST00000593564 NDUFAF7Q7L592 441 aa22.77■■□□□ 1.24
LSM4-202ENST00000593564 LAPTM4BQ86VI4 370 aa22.77■■□□□ 1.24
LSM4-202ENST00000593564 PAQR7Q86WK9 346 aa22.77■■□□□ 1.24
LSM4-202ENST00000593564 CATSPER1Q8NEC5 780 aa22.77■■□□□ 1.24
LSM4-202ENST00000593564 MAIP1Q8WWC4 291 aa22.77■■□□□ 1.24
LSM4-202ENST00000593564 SLX1AQ9BQ83 275 aa22.77■■□□□ 1.24
LSM4-202ENST00000593564 C14orf105Q9NVL8 296 aa22.77■■□□□ 1.24
LSM4-202ENST00000593564 OSGIN2Q9Y236 505 aa22.77■■□□□ 1.24
LSM4-202ENST00000593564 CRYL1Q9Y2S2 319 aa22.77■■□□□ 1.24
LSM4-202ENST00000593564 SVILO95425 2214 aa22.77■■□□□ 1.24
LSM4-202ENST00000593564 NSG1A0A0A6YYJ2 146 aa22.76■■□□□ 1.23
LSM4-202ENST00000593564 IGKV1-8A0A0C4DH67 115 aa22.76■■□□□ 1.23
LSM4-202ENST00000593564 LRRTM2O43300 516 aa22.76■■□□□ 1.23
LSM4-202ENST00000593564 SOX11P35716 441 aa22.76■■□□□ 1.23
LSM4-202ENST00000593564 HSD17B2P37059 387 aa22.76■■□□□ 1.23
LSM4-202ENST00000593564 EMP2P54851 167 aa22.76■■□□□ 1.23
LSM4-202ENST00000593564 PER3P56645 1201 aa22.76■■□□□ 1.23
LSM4-202ENST00000593564 GARNL3Q5VVW2 1013 aa22.76■■□□□ 1.23
LSM4-202ENST00000593564 CILP2Q8IUL8 1156 aa22.76■■□□□ 1.23
LSM4-202ENST00000593564 CSNK1A1LQ8N752 337 aa22.76■■□□□ 1.23
LSM4-202ENST00000593564 BCORP1Q8N888 145 aa22.76■■□□□ 1.23
LSM4-202ENST00000593564 SYNPO2LQ9H987 977 aa22.76■■□□□ 1.23
LSM4-202ENST00000593564 GALPQ9UBC7 116 aa22.76■■□□□ 1.23
LSM4-202ENST00000593564 TRPC4Q9UBN4 977 aa22.76■■□□□ 1.23
LSM4-202ENST00000593564 RUVBL1Q9Y265 456 aaKnown RBP22.76■■□□□ 1.23
LSM4-202ENST00000593564 TCRBV7S3A2A0A539 114 aa22.75■■□□□ 1.23
LSM4-202ENST00000593564 IDSB3KWA1 339 aa22.75■■□□□ 1.23
LSM4-202ENST00000593564 PCDH17O14917 1159 aa22.75■■□□□ 1.23
LSM4-202ENST00000593564 FGGP02679 453 aa22.75■■□□□ 1.23
LSM4-202ENST00000593564 CATP04040 527 aaKnown RBP22.75■■□□□ 1.23
LSM4-202ENST00000593564 SERPINA7P05543 415 aa22.75■■□□□ 1.23
LSM4-202ENST00000593564 PRR35P0CG20 571 aa22.75■■□□□ 1.23
LSM4-202ENST00000593564 SLC26A3P40879 764 aa22.75■■□□□ 1.23
LSM4-202ENST00000593564 KCNJ1P48048 391 aa22.75■■□□□ 1.23
LSM4-202ENST00000593564 PRDX1Q06830 199 aaKnown RBP22.75■■□□□ 1.23
LSM4-202ENST00000593564 KLHL38Q2WGJ6 581 aa22.75■■□□□ 1.23
LSM4-202ENST00000593564 ZNF425Q6IV72 752 aa22.75■■□□□ 1.23
LSM4-202ENST00000593564 PSMF1Q92530 271 aa22.75■■□□□ 1.23
LSM4-202ENST00000593564 OR2A5Q96R48 311 aa22.75■■□□□ 1.23
LSM4-202ENST00000593564 OLAHQ9NV23 265 aa22.75■■□□□ 1.23
LSM4-202ENST00000593564 UTP6Q9NYH9 597 aaKnown RBP22.75■■□□□ 1.23
LSM4-202ENST00000593564 VPS9D1Q9Y2B5 631 aa22.75■■□□□ 1.23
LSM4-202ENST00000593564 LRBAP50851 2863 aa22.74■■□□□ 1.23
LSM4-202ENST00000593564 DYTNA2CJ06 578 aa22.74■■□□□ 1.23
LSM4-202ENST00000593564 ZNF839A8K0R7 811 aa22.74■■□□□ 1.23
LSM4-202ENST00000593564 E5RI56 91 aa22.74■■□□□ 1.23
LSM4-202ENST00000593564 CCNDBP1O95273 360 aa22.74■■□□□ 1.23
LSM4-202ENST00000593564 PKMP14618 531 aaKnown RBP22.74■■□□□ 1.23
LSM4-202ENST00000593564 PAMP19021 973 aa22.74■■□□□ 1.23
LSM4-202ENST00000593564 CXCR2P25025 360 aa22.74■■□□□ 1.23
LSM4-202ENST00000593564 PNLIPRP1P54315 467 aa22.74■■□□□ 1.23
LSM4-202ENST00000593564 ARG2P78540 354 aa22.74■■□□□ 1.23
LSM4-202ENST00000593564 RELAQ04206 551 aa22.74■■□□□ 1.23
LSM4-202ENST00000593564 HKDC1Q2TB90 917 aa22.74■■□□□ 1.23
LSM4-202ENST00000593564 ICE2Q659A1 982 aa22.74■■□□□ 1.23
LSM4-202ENST00000593564 NEPROQ6NW34 567 aa22.74■■□□□ 1.23
LSM4-202ENST00000593564 NEK10Q6ZWH5 1172 aa22.74■■□□□ 1.23
LSM4-202ENST00000593564 CENPUQ71F23 418 aa22.74■■□□□ 1.23
LSM4-202ENST00000593564 ARHGEF39Q8N4T4 335 aa22.74■■□□□ 1.23
LSM4-202ENST00000593564 AMER3Q8N944 861 aa22.74■■□□□ 1.23
LSM4-202ENST00000593564 OR1N1Q8NGS0 311 aa22.74■■□□□ 1.23
LSM4-202ENST00000593564 BRIX1Q8TDN6 353 aaKnown RBP22.74■■□□□ 1.23
LSM4-202ENST00000593564 PKP4Q99569 1192 aa22.74■■□□□ 1.23
LSM4-202ENST00000593564 TGIF2Q9GZN2 237 aa22.74■■□□□ 1.23
LSM4-202ENST00000593564 MKKSQ9NPJ1 570 aaPredicted RBP22.74■■□□□ 1.23
LSM4-202ENST00000593564 INTS10Q9NVR2 710 aaKnown RBP22.74■■□□□ 1.23
LSM4-202ENST00000593564 PTGFRNQ9P2B2 879 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms