RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 GJB3O75712 270 aa4.66□□□□□ -1.66
SMAD4-216ENST00000593223 SLITRK3O94933 977 aa4.66□□□□□ -1.66
SMAD4-216ENST00000593223 OLFM2O95897 454 aa4.66□□□□□ -1.66
SMAD4-216ENST00000593223 PON1P27169 355 aa4.66□□□□□ -1.66
SMAD4-216ENST00000593223 HOXA13P31271 388 aaPredicted RBP4.66□□□□□ -1.66
SMAD4-216ENST00000593223 TLX1P31314 330 aaPredicted RBP4.66□□□□□ -1.66
SMAD4-216ENST00000593223 GARSP41250 739 aaKnown RBP4.66□□□□□ -1.66
SMAD4-216ENST00000593223 HNMTP50135 292 aa4.66□□□□□ -1.66
SMAD4-216ENST00000593223 PPP5CP53041 499 aa4.66□□□□□ -1.66
SMAD4-216ENST00000593223 CCNA1P78396 465 aa4.66□□□□□ -1.66
SMAD4-216ENST00000593223 FILIP1LQ4L180 1135 aa4.66□□□□□ -1.66
SMAD4-216ENST00000593223 SIRPB2Q5JXA9 342 aa4.66□□□□□ -1.66
SMAD4-216ENST00000593223 STPG1Q5TH74 334 aa4.66□□□□□ -1.66
SMAD4-216ENST00000593223 CLEC17AQ6ZS10 378 aa4.66□□□□□ -1.66
SMAD4-216ENST00000593223 LRRC43Q8N309 656 aa4.66□□□□□ -1.66
SMAD4-216ENST00000593223 C17orf50Q8WW18 174 aa4.66□□□□□ -1.66
SMAD4-216ENST00000593223 TUBGCP3Q96CW5 907 aa4.66□□□□□ -1.66
SMAD4-216ENST00000593223 RMDN2Q96LZ7 410 aa4.66□□□□□ -1.66
SMAD4-216ENST00000593223 CEP295NLQ96MC4 621 aa4.66□□□□□ -1.66
SMAD4-216ENST00000593223 RBM14Q96PK6 669 aaKnown RBP4.66□□□□□ -1.66
SMAD4-216ENST00000593223 TBCDQ9BTW9 1192 aa4.66□□□□□ -1.66
SMAD4-216ENST00000593223 MMADHCQ9H3L0 296 aaPredicted RBP4.66□□□□□ -1.66
SMAD4-216ENST00000593223 DNAJC18Q9H819 358 aa4.66□□□□□ -1.66
SMAD4-216ENST00000593223 TAB2Q9NYJ8 693 aa4.66□□□□□ -1.66
SMAD4-216ENST00000593223 AKAP7Q9P0M2 348 aaPredicted RBP4.66□□□□□ -1.66
SMAD4-216ENST00000593223 TAAR2Q9P1P5 351 aa4.66□□□□□ -1.66
SMAD4-216ENST00000593223 N6AMT1Q9Y5N5 214 aa4.66□□□□□ -1.66
SMAD4-216ENST00000593223 ADAMTSL1Q8N6G6 1762 aa4.65□□□□□ -1.66
SMAD4-216ENST00000593223 TCF20Q9UGU0 1960 aaKnown RBP4.65□□□□□ -1.66
SMAD4-216ENST00000593223 BAHCC1Q9P281 2608 aa4.65□□□□□ -1.66
SMAD4-216ENST00000593223 LAMA2P24043 3122 aaKnown RBP4.65□□□□□ -1.66
SMAD4-216ENST00000593223 C5P01031 1676 aa4.65□□□□□ -1.66
SMAD4-216ENST00000593223 ANKRD66B4E2M5 251 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 PSMD14O00487 310 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 BUD23O43709 281 aaKnown RBP4.65□□□□□ -1.67
SMAD4-216ENST00000593223 STAMBPO95630 424 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 KRT19P08727 400 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 HRH2P25021 359 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 EPHX2P34913 555 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 ACAA2P42765 397 aaKnown RBP4.65□□□□□ -1.67
SMAD4-216ENST00000593223 ATP5OP48047 213 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 HOXA1P49639 335 aaPredicted RBP4.65□□□□□ -1.67
SMAD4-216ENST00000593223 CTSCP53634 463 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 MLLT10P55197 1068 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 PHEXP78562 749 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 PPP2R2BQ00005 443 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 RALGDSQ12967 914 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 AIMP2Q13155 320 aaKnown RBP4.65□□□□□ -1.67
SMAD4-216ENST00000593223 RBBP5Q15291 538 aaKnown RBP4.65□□□□□ -1.67
SMAD4-216ENST00000593223 MEP1AQ16819 746 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 CCDC40Q4G0X9 1142 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 BMP2KLQ5H9B9 411 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 PLEKHS1Q5SXH7 462 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 C9orf50Q5SZB4 431 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 RARS2Q5T160 578 aaKnown RBP4.65□□□□□ -1.67
SMAD4-216ENST00000593223 GARNL3Q5VVW2 1013 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 ZDHHC20Q5W0Z9 365 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 TPGS2Q68CL5 300 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 KRT80Q6KB66 452 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 ZNF852Q6ZMS4 543 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 SLC26A9Q7LBE3 791 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 TRMT1LQ7Z2T5 733 aaKnown RBP4.65□□□□□ -1.67
SMAD4-216ENST00000593223 GLRX5Q86SX6 157 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 SCYL3Q8IZE3 742 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 C17orf53Q8N3J3 647 aaPredicted RBP4.65□□□□□ -1.67
SMAD4-216ENST00000593223 GCSAMQ8N6F7 178 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 SLC38A9Q8NBW4 561 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 RDM1Q8NG50 284 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 PRAM1Q96QH2 718 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 DDOQ99489 341 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 KRT23Q9C075 422 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 LRRCC1Q9C099 1032 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 STMN4Q9H169 189 aaPredicted RBP4.65□□□□□ -1.67
SMAD4-216ENST00000593223 UPF2Q9HAU5 1272 aaKnown RBP4.65□□□□□ -1.67
SMAD4-216ENST00000593223 TM9SF3Q9HD45 589 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 PFDN4Q9NQP4 134 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 POLE3Q9NRF9 147 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 SERINC1Q9NRX5 453 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 AATFQ9NY61 560 aaKnown RBP eCLIP4.65□□□□□ -1.67
SMAD4-216ENST00000593223 COQ3Q9NZJ6 369 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 KLHL9Q9P2J3 617 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 IL19Q9UHD0 177 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 MTUS1Q9ULD2 1270 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 EXOC7Q9UPT5 735 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.65□□□□□ -1.67
SMAD4-216ENST00000593223 SLIT3O75094 1523 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 ANKRD36BQ8N2N9 1353 aa4.65□□□□□ -1.67
SMAD4-216ENST00000593223 DAPK1P53355 1430 aa4.64□□□□□ -1.67
SMAD4-216ENST00000593223 GREB1LQ9C091 1923 aaPredicted RBP4.64□□□□□ -1.67
SMAD4-216ENST00000593223 PAPPA2Q9BXP8 1791 aa4.64□□□□□ -1.67
SMAD4-216ENST00000593223 A0A1W2PP11 408 aa4.64□□□□□ -1.67
SMAD4-216ENST00000593223 TMEM189-UBE2V1I3L0A0 370 aa4.64□□□□□ -1.67
SMAD4-216ENST00000593223 J3QR06 171 aa4.64□□□□□ -1.67
SMAD4-216ENST00000593223 L7N2F9 121 aa4.64□□□□□ -1.67
SMAD4-216ENST00000593223 KIF2AO00139 706 aaPredicted RBP4.64□□□□□ -1.67
SMAD4-216ENST00000593223 PEX11AO75192 247 aa4.64□□□□□ -1.67
SMAD4-216ENST00000593223 PAHP00439 452 aa4.64□□□□□ -1.67
SMAD4-216ENST00000593223 PDHBP11177 359 aa4.64□□□□□ -1.67
SMAD4-216ENST00000593223 ZNF23P17027 643 aa4.64□□□□□ -1.67
SMAD4-216ENST00000593223 AHRP35869 848 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms