RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 GRTP1Q5TC63 336 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 HES3Q5TGS1 186 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 NKAIN2Q5VXU1 208 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 CAPRIN2Q6IMN6 1127 aaKnown RBP6.21□□□□□ -1.42
VPS4B-205ENST00000591383 LRRC8EQ6NSJ5 796 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 ARMC6Q6NXE6 501 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 IRGCQ6NXR0 463 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 TTC23LQ6PF05 361 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 PAQR3Q6TCH7 311 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 ABRAXAS1Q6UWZ7 409 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 UNC5DQ6UXZ4 953 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 WASH2PQ6VEQ5 465 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 DBX2Q6ZNG2 339 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 TMEM26Q6ZUK4 368 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 FRA10AC1Q70Z53 315 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 FKBP9P1Q75LS8 142 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 DGLUCYQ7Z3D6 616 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 CEP97Q8IW35 865 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 CCDC103Q8IW40 242 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 ZC3H7AQ8IWR0 971 aaKnown RBP6.21□□□□□ -1.42
VPS4B-205ENST00000591383 SVOPQ8N4V2 548 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 OR6C4Q8NGE1 309 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 OR52E1Q8NGJ3 308 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.21□□□□□ -1.42
VPS4B-205ENST00000591383 DCAKDQ8WVC6 231 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 SLC44A1Q8WWI5 657 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 LCN9Q8WX39 176 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 RSC1A1Q92681 617 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 TFGQ92734 400 aaPredicted RBP6.21□□□□□ -1.42
VPS4B-205ENST00000591383 CAVIN3Q969G5 261 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 SH3KBP1Q96B97 665 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 ZBTB9Q96C00 473 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 GFM1Q96RP9 751 aaKnown RBP6.21□□□□□ -1.42
VPS4B-205ENST00000591383 CCDC77Q9BR77 488 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.21□□□□□ -1.42
VPS4B-205ENST00000591383 XKR8Q9H6D3 395 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 KIR3DX1Q9H7L2 352 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 MVB12BQ9H7P6 319 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 WASH6PQ9NQA3 447 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 SNX15Q9NRS6 342 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 ABCF3Q9NUQ8 709 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 PCMTD2Q9NV79 361 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 CTNNAL1Q9UBT7 734 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 TBK1Q9UHD2 729 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 RAB21Q9UL25 225 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 MKL2Q9ULH7 1088 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 CDYLQ9Y232 598 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 MED16Q9Y2X0 877 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 DHRS7Q9Y394 339 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 COLEC10Q9Y6Z7 277 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 COL27A1Q8IZC6 1860 aaPredicted RBP6.21□□□□□ -1.42
VPS4B-205ENST00000591383 ANKRD12Q6UB98 2062 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 AKAP13Q12802 2813 aa6.21□□□□□ -1.42
VPS4B-205ENST00000591383 IGHV1OR21-1A0A087WYE8 117 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 EME2A4GXA9 379 aaPredicted RBP6.2□□□□□ -1.42
VPS4B-205ENST00000591383 OR6C74A6NCV1 312 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 ZW10O43264 779 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 KDM1AO60341 852 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 GPC4O75487 556 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 RASSF9O75901 435 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 KRT37O76014 449 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 UBXN7O94888 489 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 SLCO2B1O94956 709 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 GP1BAP07359 652 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 TUBBP07437 444 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 MPC1LP0DKB6 136 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 CBSLP0DN79 551 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 AMD1P17707 334 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 XRCC1P18887 633 aaPredicted RBP6.2□□□□□ -1.42
VPS4B-205ENST00000591383 CYP2A7P20853 494 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 PKLRP30613 574 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 SHMT2P34897 504 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 CBSP35520 551 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 GFERP55789 205 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 PPP1CAP62136 330 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 IRF9Q00978 393 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 ILF2Q12905 390 aaKnown RBP6.2□□□□□ -1.42
VPS4B-205ENST00000591383 SP140Q13342 867 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 CSHL1Q14406 222 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 GBX1Q14549 363 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.2□□□□□ -1.42
VPS4B-205ENST00000591383 OGFOD3Q6PK18 319 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 MBOAT1Q6ZNC8 495 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 RBM44Q6ZP01 1051 aaKnown RBP6.2□□□□□ -1.42
VPS4B-205ENST00000591383 GLRX5Q86SX6 157 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 ADAMTSL2Q86TH1 951 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 TBC1D1Q86TI0 1168 aaPredicted RBP6.2□□□□□ -1.42
VPS4B-205ENST00000591383 SLCO6A1Q86UG4 719 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 OOSP2Q86WS3 158 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 C17orf82Q86X59 251 aaPredicted RBP6.2□□□□□ -1.42
VPS4B-205ENST00000591383 RBM12BQ8IXT5 1001 aaKnown RBP6.2□□□□□ -1.42
VPS4B-205ENST00000591383 TBC1D21Q8IYX1 336 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 SPATA6LQ8N4H0 392 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 RAB42Q8N4Z0 105 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 C2orf73Q8N5S3 287 aaPredicted RBP6.2□□□□□ -1.42
VPS4B-205ENST00000591383 LMNTD1Q8N9Z9 388 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 MYRIPQ8NFW9 859 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 OR5K2Q8NHB8 316 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 EEF1AKMT1Q8WVE0 214 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 KCTD4Q8WVF5 259 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms