RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 FAM120CQ9NX05 1096 aaKnown RBP16.65■□□□□ 0.26
SMARCA4-215ENST00000590574 LOC285095A0A1B0GVY8 99 aa16.65■□□□□ 0.26
SMARCA4-215ENST00000590574 GJA1P17302 382 aa16.65■□□□□ 0.26
SMARCA4-215ENST00000590574 SLBPQ14493 270 aaKnown RBP eCLIP16.65■□□□□ 0.26
SMARCA4-215ENST00000590574 IQCCQ4KMZ1 466 aa16.65■□□□□ 0.26
SMARCA4-215ENST00000590574 RFTN2Q52LD8 501 aaPredicted RBP16.65■□□□□ 0.26
SMARCA4-215ENST00000590574 FAM92BQ6ZTR7 304 aa16.65■□□□□ 0.26
SMARCA4-215ENST00000590574 MFSD6LQ8IWD5 586 aa16.65■□□□□ 0.26
SMARCA4-215ENST00000590574 CEP295NLQ96MC4 621 aa16.65■□□□□ 0.26
SMARCA4-215ENST00000590574 BOCQ9BWV1 1114 aa16.65■□□□□ 0.26
SMARCA4-215ENST00000590574 ABCB9Q9NP78 766 aa16.65■□□□□ 0.26
SMARCA4-215ENST00000590574 EQTNQ9NQ60 294 aa16.65■□□□□ 0.26
SMARCA4-215ENST00000590574 A0A1W2PRB8 838 aa16.65■□□□□ 0.26
SMARCA4-215ENST00000590574 C1QTNF3-AMACRE9PGA6 284 aa16.65■□□□□ 0.26
SMARCA4-215ENST00000590574 HSF5Q4G112 596 aaPredicted RBP16.65■□□□□ 0.26
SMARCA4-215ENST00000590574 Q6ZVU0 165 aa16.65■□□□□ 0.26
SMARCA4-215ENST00000590574 ARRDC2Q8TBH0 407 aa16.65■□□□□ 0.26
SMARCA4-215ENST00000590574 ATOH8Q96SQ7 321 aa16.65■□□□□ 0.26
SMARCA4-215ENST00000590574 FUNDC2Q9BWH2 189 aa16.65■□□□□ 0.26
SMARCA4-215ENST00000590574 BCAP31P51572 246 aa16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 SLC36A3Q495N2 470 aa16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 SPIN4Q56A73 249 aa16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 RAB43Q86YS6 212 aa16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 OXR1Q8N573 874 aa16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 OR52L1Q8NGH7 329 aa16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 NFKBIDQ8NI38 313 aa16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 DIRAS2Q96HU8 199 aa16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 MYOCQ99972 504 aa16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 HHLA1C9JL84 531 aa16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 AP3D1O14617 1153 aa16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 PLPP4Q5VZY2 271 aa16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 NOXRED1Q6NXP6 359 aa16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 NCEH1Q6PIU2 408 aa16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 GALNT7Q86SF2 657 aa16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 PELI3Q8N2H9 469 aa16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 MFSD2AQ8NA29 543 aa16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 TRIB2Q92519 343 aa16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 DPP7Q9UHL4 492 aa16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 POFUT2Q9Y2G5 429 aa16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 GPSM3Q9Y4H4 160 aa16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 UPK3BL1B0FP48 263 aa16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 UPK3BL2E5RIL1 263 aa16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 UBFD1O14562 309 aaKnown RBP16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 STC2O76061 302 aa16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 ATXN1LP0C7T5 689 aaKnown RBP16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 GSTM2P28161 218 aa16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 RAB14P61106 215 aa16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 GPRC6AQ5T6X5 926 aa16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 METTL25Q8N6Q8 603 aa16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 EFCAB14O75071 495 aa16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 GBAP04062 536 aa16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 ZNF26P17031 533 aaPredicted RBP16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 DGKEP52429 567 aa16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 CYBRD1Q53TN4 286 aa16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 ARSIQ5FYB1 569 aa16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 PIANPQ8IYJ0 282 aa16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 SLC43A3Q8NBI5 491 aa16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 PIK3R3Q92569 461 aa16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 OR2AG1Q9H205 316 aa16.64■□□□□ 0.25
SMARCA4-215ENST00000590574 K7ERQ8 282 aa16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 B4GAT1O43505 415 aa16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 CHRM5P08912 532 aaPredicted RBP16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 GTDC1Q4AE62 458 aa16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 TPRG1LQ5T0D9 272 aa16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 CMTM8Q8IZV2 173 aa16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 SH3RF2Q8TEC5 729 aa16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 CCDC3Q9BQI4 270 aa16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 SNTG1Q9NSN8 517 aa16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 IMP3Q9NV31 184 aaKnown RBP16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 OSER1Q9NX31 292 aa16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 TBC1D14Q9P2M4 693 aa16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 HEMK1Q9Y5R4 338 aaPredicted RBP16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 C2orf78A6NCI8 922 aa16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 ZNF840PA6NDX5 716 aa16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 ZFP69Q49AA0 526 aa16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 RTP2Q5QGT7 225 aa16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.63■□□□□ 0.251e-7■■■■■ 34.5
SMARCA4-215ENST00000590574 TMPRSS11AQ6ZMR5 421 aa16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 BTN2A2Q8WVV5 523 aa16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 OVCA2Q8WZ82 227 aa16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 SMIM14Q96QK8 99 aa16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 SLAMF8Q9P0V8 285 aa16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 SLC1A7O00341 560 aa16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 NME6O75414 186 aaPredicted RBP16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 FBXW4P57775 412 aa16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 NPAS3Q8IXF0 933 aa16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 MAELQ96JY0 434 aaKnown RBP16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 IL4I1Q96RQ9 567 aa16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 TMEM106CQ9BVX2 250 aa16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 FARSBQ9NSD9 589 aaKnown RBP16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 TVP23BQ9NYZ1 205 aa16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 RNF6Q9Y252 685 aa16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 WNT9AO14904 365 aa16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 INHAP05111 366 aa16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 GALTP07902 379 aa16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 RPL34P49207 117 aaKnown RBP16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 ZNF140P52738 457 aaPredicted RBP16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 MCCD1P59942 119 aaPredicted RBP16.63■□□□□ 0.25
SMARCA4-215ENST00000590574 C9orf64Q5T6V5 341 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms