RNA–Protein interactions for RNA: ENST00000589104.5

KDM4B-208, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,470 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-208ENST00000589104 TLR5O60602 858 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 SOCS5O75159 536 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 UPK1BO75841 260 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 TRBC1P01850 177 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 CASP2P42575 452 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 DEPDC4Q8N2C3 294 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 SDR16C5Q8N3Y7 309 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 ATAD1Q8NBU5 361 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 ADGRE3Q9BY15 652 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 DNMT3LQ9UJW3 386 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 PLXND1Q9Y4D7 1925 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 CEP350Q5VT06 3117 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 NPC1O15118 1278 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 RAD51BO15315 384 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 MPC1LP0DKB6 136 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 DNAJA1P31689 397 aaKnown RBP13.01□□□□□ -0.33
KDM4B-208ENST00000589104 MAPK11Q15759 364 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 RTP2Q5QGT7 225 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 OR2T5Q6IEZ7 315 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 TMC5Q6UXY8 1006 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 SLC46A3Q7Z3Q1 461 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 OR2T29Q8NH02 315 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 HMG20AQ9NP66 347 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 THSD1Q9NS62 852 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 TMEM184CQ9NVA4 438 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 GPRC5BQ9NZH0 403 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 NPAP1Q9NZP6 1156 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 KCND3Q9UK17 655 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 BACE2Q9Y5Z0 518 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 TEX28O15482 410 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 GJB5O95377 273 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 TACR1P25103 407 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 TUBA1BP68363 451 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 ZNF181Q2M3W8 571 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 OTUD3Q5T2D3 398 aaPredicted RBP13.01□□□□□ -0.33
KDM4B-208ENST00000589104 TUBA1AQ71U36 451 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 TAS2R42Q7RTR8 314 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 PHACTR4Q8IZ21 702 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 SUN5Q8TC36 379 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 ASB11Q8WXH4 323 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 CDADC1Q9BWV3 514 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 DSN1Q9H410 356 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 TMEM161AQ9NX61 479 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 QPCTLQ9NXS2 382 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 BTNL2Q9UIR0 455 aa13.01□□□□□ -0.33
KDM4B-208ENST00000589104 TNFRSF10AO00220 468 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 CHRNB1P11230 501 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 BPIP17213 487 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 CTPS1P17812 591 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 BMPR1AP36894 532 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 AP1S1P61966 158 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 SP140Q13342 867 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 PDE7AQ13946 482 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 MAPKAPK3Q16644 382 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 GPR33Q49SQ1 333 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 NEK5Q6P3R8 708 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 CFAP52Q8N1V2 620 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 IL17RCQ8NAC3 791 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 CCNB1IP1Q9NPC3 277 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 MBD1Q9UIS9 605 aaPredicted RBP13□□□□□ -0.33
KDM4B-208ENST00000589104 SAMD4AQ9UPU9 718 aaKnown RBP13□□□□□ -0.33
KDM4B-208ENST00000589104 LOC730098B7Z3J9 87 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 MAP4P27816 1152 aaKnown RBP13□□□□□ -0.33
KDM4B-208ENST00000589104 LIPAP38571 399 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 SLC19A1P41440 591 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 RPS14P62263 151 aaKnown RBP13□□□□□ -0.33
KDM4B-208ENST00000589104 RPS24P62847 133 aaKnown RBP13□□□□□ -0.33
KDM4B-208ENST00000589104 EFNB1P98172 346 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 ITKQ08881 620 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 VMACQ2NL98 169 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 ADGRF1Q5T601 910 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 KIAA1614Q5VZ46 1190 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 CYP2U1Q7Z449 544 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 CCDC190Q86UF4 302 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 CCDC103Q8IW40 242 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 ABI1Q8IZP0 508 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 ZBTB2Q8N680 514 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 HOXD1Q9GZZ0 328 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 ZNF226Q9NYT6 803 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 XPNPEP2O43895 674 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 RECQL5O94762 991 aaPredicted RBP13□□□□□ -0.33
KDM4B-208ENST00000589104 MT-ND2P03891 347 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 PPP3CCP48454 512 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 PFN3P60673 137 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 RPL38P63173 70 aaKnown RBP13□□□□□ -0.33
KDM4B-208ENST00000589104 CSTF3Q12996 717 aaKnown RBP13□□□□□ -0.33
KDM4B-208ENST00000589104 NPTX1Q15818 432 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 BPHLQ86WA6 291 aaPredicted RBP13□□□□□ -0.33
KDM4B-208ENST00000589104 SERPINA9Q86WD7 417 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 REM2Q8IYK8 340 aaPredicted RBP13□□□□□ -0.33
KDM4B-208ENST00000589104 RBFAQ8N0V3 343 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 SREK1IP1Q8N9Q2 155 aaPredicted RBP13□□□□□ -0.33
KDM4B-208ENST00000589104 SETD9Q8NE22 299 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 ZNF555Q8NEP9 628 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 MCOLN3Q8TDD5 553 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 FCGR1BQ92637 280 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 DNASE1L2Q92874 299 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 EPS8L2Q9H6S3 715 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 CD274Q9NZQ7 290 aa13□□□□□ -0.33
KDM4B-208ENST00000589104 PCDHGC4Q9Y5F7 938 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms