RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 O00370 1275 aa3.13□□□□□ -1.91
SMAD4-207ENST00000589076 SLC30A4O14863 429 aa3.13□□□□□ -1.91
SMAD4-207ENST00000589076 SLC22A2O15244 555 aa3.13□□□□□ -1.91
SMAD4-207ENST00000589076 SLC7A4O43246 635 aa3.13□□□□□ -1.91
SMAD4-207ENST00000589076 SLC22A3O75751 556 aa3.13□□□□□ -1.91
SMAD4-207ENST00000589076 TGDSO95455 350 aa3.13□□□□□ -1.91
SMAD4-207ENST00000589076 EDN1P05305 212 aa3.13□□□□□ -1.91
SMAD4-207ENST00000589076 FAM86B2P0C5J1 330 aa3.13□□□□□ -1.91
SMAD4-207ENST00000589076 IGHV4-31P0DP07 118 aa3.13□□□□□ -1.91
SMAD4-207ENST00000589076 CEACAM8P31997 349 aaPredicted RBP3.13□□□□□ -1.91
SMAD4-207ENST00000589076 CSTF2P33240 577 aaKnown RBP eCLIP3.13□□□□□ -1.91
SMAD4-207ENST00000589076 CDX1P47902 265 aaPredicted RBP3.13□□□□□ -1.91
SMAD4-207ENST00000589076 GSDMDP57764 484 aa3.13□□□□□ -1.91
SMAD4-207ENST00000589076 TAF10Q12962 218 aa3.13□□□□□ -1.91
SMAD4-207ENST00000589076 MEP1BQ16820 701 aa3.13□□□□□ -1.91
SMAD4-207ENST00000589076 C14orf177Q52M58 125 aa3.13□□□□□ -1.91
SMAD4-207ENST00000589076 PDLIM3Q53GG5 364 aaPredicted RBP3.13□□□□□ -1.91
SMAD4-207ENST00000589076 NHSL2Q5HYW2 709 aa3.13□□□□□ -1.91
SMAD4-207ENST00000589076 SLC35D3Q5M8T2 416 aa3.13□□□□□ -1.91
SMAD4-207ENST00000589076 OR4A47Q6IF82 309 aa3.13□□□□□ -1.91
SMAD4-207ENST00000589076 RBMS3Q6XE24 437 aaKnown RBP3.13□□□□□ -1.91
SMAD4-207ENST00000589076 TRPT1Q86TN4 253 aaKnown RBP3.13□□□□□ -1.91
SMAD4-207ENST00000589076 ISCA2Q86U28 154 aa3.13□□□□□ -1.91
SMAD4-207ENST00000589076 KLHL7Q8IXQ5 586 aa3.13□□□□□ -1.91
SMAD4-207ENST00000589076 MMD2Q8IY49 270 aa3.13□□□□□ -1.91
SMAD4-207ENST00000589076 FCAMRQ8WWV6 532 aa3.13□□□□□ -1.91
SMAD4-207ENST00000589076 PIGBQ92521 554 aa3.13□□□□□ -1.91
SMAD4-207ENST00000589076 PARK7Q99497 189 aaKnown RBP3.13□□□□□ -1.91
SMAD4-207ENST00000589076 PITPNM3Q9BZ71 974 aa3.13□□□□□ -1.91
SMAD4-207ENST00000589076 ACTL8Q9H568 366 aa3.13□□□□□ -1.91
SMAD4-207ENST00000589076 TLE6Q9H808 572 aa3.13□□□□□ -1.91
SMAD4-207ENST00000589076 LEF1Q9UJU2 399 aaPredicted RBP3.13□□□□□ -1.91
SMAD4-207ENST00000589076 STUB1Q9UNE7 303 aa3.13□□□□□ -1.91
SMAD4-207ENST00000589076 KCNK7Q9Y2U2 307 aa3.13□□□□□ -1.91
SMAD4-207ENST00000589076 RIPK3Q9Y572 518 aa3.13□□□□□ -1.91
SMAD4-207ENST00000589076 ZFP37Q9Y6Q3 630 aaPredicted RBP3.13□□□□□ -1.91
SMAD4-207ENST00000589076 PCDH7O60245 1069 aa3.12□□□□□ -1.91
SMAD4-207ENST00000589076 CIDEAO60543 219 aa3.12□□□□□ -1.91
SMAD4-207ENST00000589076 DFFBO76075 338 aa3.12□□□□□ -1.91
SMAD4-207ENST00000589076 C9P02748 559 aa3.12□□□□□ -1.91
SMAD4-207ENST00000589076 GP1BBP13224 206 aa3.12□□□□□ -1.91
SMAD4-207ENST00000589076 EPORP19235 508 aa3.12□□□□□ -1.91
SMAD4-207ENST00000589076 ITGA3P26006 1051 aa3.12□□□□□ -1.91
SMAD4-207ENST00000589076 TIA1P31483 386 aaKnown RBP eCLIP3.12□□□□□ -1.91
SMAD4-207ENST00000589076 PTENP60484 403 aa3.12□□□□□ -1.91
SMAD4-207ENST00000589076 KCNJ10P78508 379 aa3.12□□□□□ -1.91
SMAD4-207ENST00000589076 YWHAHQ04917 246 aaPredicted RBP3.12□□□□□ -1.91
SMAD4-207ENST00000589076 RASGEF1BQ0VAM2 473 aa3.12□□□□□ -1.91
SMAD4-207ENST00000589076 RRS1Q15050 365 aaKnown RBP3.12□□□□□ -1.91
SMAD4-207ENST00000589076 UGP2Q16851 508 aa3.12□□□□□ -1.91
SMAD4-207ENST00000589076 CTU2Q2VPK5 515 aaKnown RBP3.12□□□□□ -1.91
SMAD4-207ENST00000589076 KIAA1644Q3SXP7 199 aa3.12□□□□□ -1.91
SMAD4-207ENST00000589076 TXNRD3NBQ6F5E7 133 aa3.12□□□□□ -1.91
SMAD4-207ENST00000589076 C15orf39Q6ZRI6 1047 aa3.12□□□□□ -1.91
SMAD4-207ENST00000589076 LINC00696Q6ZRV3 163 aa3.12□□□□□ -1.91
SMAD4-207ENST00000589076 FAM9BQ8IZU0 186 aa3.12□□□□□ -1.91
SMAD4-207ENST00000589076 LYG1Q8N1E2 194 aa3.12□□□□□ -1.91
SMAD4-207ENST00000589076 MARVELD2Q8N4S9 558 aa3.12□□□□□ -1.91
SMAD4-207ENST00000589076 TMCO5AQ8N6Q1 288 aa3.12□□□□□ -1.91
SMAD4-207ENST00000589076 ZNF383Q8NA42 475 aa3.12□□□□□ -1.91
SMAD4-207ENST00000589076 NHLRC2Q8NBF2 726 aa3.12□□□□□ -1.91
SMAD4-207ENST00000589076 ATAD1Q8NBU5 361 aa3.12□□□□□ -1.91
SMAD4-207ENST00000589076 OR10V1Q8NGI7 309 aa3.12□□□□□ -1.91
SMAD4-207ENST00000589076 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.12□□□□□ -1.91
SMAD4-207ENST00000589076 SLC26A7Q8TE54 656 aa3.12□□□□□ -1.91
SMAD4-207ENST00000589076 SEPT1Q8WYJ6 367 aa3.12□□□□□ -1.91
SMAD4-207ENST00000589076 ST6GALNAC6Q969X2 333 aa3.12□□□□□ -1.91
SMAD4-207ENST00000589076 DESI2Q9BSY9 194 aa3.12□□□□□ -1.91
SMAD4-207ENST00000589076 OR2B2Q9GZK3 357 aa3.12□□□□□ -1.91
SMAD4-207ENST00000589076 C2orf40Q9H1Z8 148 aa3.12□□□□□ -1.91
SMAD4-207ENST00000589076 MINDY3Q9H8M7 445 aa3.12□□□□□ -1.91
SMAD4-207ENST00000589076 LMAN1LQ9HAT1 526 aa3.12□□□□□ -1.91
SMAD4-207ENST00000589076 CHST11Q9NPF2 352 aa3.12□□□□□ -1.91
SMAD4-207ENST00000589076 FAM207AQ9NSI2 230 aaPredicted RBP3.12□□□□□ -1.91
SMAD4-207ENST00000589076 ARMCX3Q9UH62 379 aaPredicted RBP3.12□□□□□ -1.91
SMAD4-207ENST00000589076 ITGA11Q9UKX5 1188 aa3.12□□□□□ -1.91
SMAD4-207ENST00000589076 LIPT1Q9Y234 373 aa3.12□□□□□ -1.91
SMAD4-207ENST00000589076 CHKBQ9Y259 395 aa3.12□□□□□ -1.91
SMAD4-207ENST00000589076 MYH15Q9Y2K3 1946 aa3.12□□□□□ -1.91
SMAD4-207ENST00000589076 IL16Q14005 1332 aa3.12□□□□□ -1.91
SMAD4-207ENST00000589076 HEG1Q9ULI3 1381 aa3.12□□□□□ -1.91
SMAD4-207ENST00000589076 IGHV4-61A0A0C4DH41 118 aa3.11□□□□□ -1.91
SMAD4-207ENST00000589076 H0YAE9 185 aa3.11□□□□□ -1.91
SMAD4-207ENST00000589076 PRAF2O60831 178 aa3.11□□□□□ -1.91
SMAD4-207ENST00000589076 FCGR3BO75015 233 aa3.11□□□□□ -1.91
SMAD4-207ENST00000589076 IGHV4-59P01825 116 aa3.11□□□□□ -1.91
SMAD4-207ENST00000589076 RLN1P04808 185 aa3.11□□□□□ -1.91
SMAD4-207ENST00000589076 TIMP3P35625 211 aa3.11□□□□□ -1.91
SMAD4-207ENST00000589076 CACNG1Q06432 222 aa3.11□□□□□ -1.91
SMAD4-207ENST00000589076 SULT2A1Q06520 285 aa3.11□□□□□ -1.91
SMAD4-207ENST00000589076 GPR17Q13304 367 aa3.11□□□□□ -1.91
SMAD4-207ENST00000589076 HERC3Q15034 1050 aa3.11□□□□□ -1.91
SMAD4-207ENST00000589076 NONOQ15233 471 aaKnown RBP eCLIP3.11□□□□□ -1.91
SMAD4-207ENST00000589076 E2F5Q15329 346 aa3.11□□□□□ -1.91
SMAD4-207ENST00000589076 RBBP7Q16576 425 aa3.11□□□□□ -1.91
SMAD4-207ENST00000589076 ANKRD20A4Q4UJ75 823 aa3.11□□□□□ -1.91
SMAD4-207ENST00000589076 ANKRD20A8PQ5CZ79 823 aa3.11□□□□□ -1.91
SMAD4-207ENST00000589076 ANKRD20A2Q5SQ80 823 aa3.11□□□□□ -1.91
SMAD4-207ENST00000589076 ANKRD20A1Q5TYW2 823 aa3.11□□□□□ -1.91
SMAD4-207ENST00000589076 ANKRD20A3Q5VUR7 823 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms