RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 ATG9BQ674R7 924 aa6.11□□□□□ -1.43
SDF2-205ENST00000587629 B3GNTL1Q67FW5 361 aaPredicted RBP6.11□□□□□ -1.43
SDF2-205ENST00000587629 NDUFAF7Q7L592 441 aa6.11□□□□□ -1.43
SDF2-205ENST00000587629 SLC13A5Q86YT5 568 aaPredicted RBP6.11□□□□□ -1.43
SDF2-205ENST00000587629 KBTBD2Q8IY47 623 aa6.11□□□□□ -1.43
SDF2-205ENST00000587629 RAB42Q8N4Z0 105 aa6.11□□□□□ -1.43
SDF2-205ENST00000587629 BCORP1Q8N888 145 aa6.11□□□□□ -1.43
SDF2-205ENST00000587629 SPC24Q8NBT2 197 aa6.11□□□□□ -1.43
SDF2-205ENST00000587629 PPFIBP2Q8ND30 876 aa6.11□□□□□ -1.43
SDF2-205ENST00000587629 OR2A1Q8NGT9 310 aa6.11□□□□□ -1.43
SDF2-205ENST00000587629 MMABQ96EY8 250 aaPredicted RBP6.11□□□□□ -1.43
SDF2-205ENST00000587629 VPS50Q96JG6 964 aa6.11□□□□□ -1.43
SDF2-205ENST00000587629 C10orf90Q96M02 699 aa6.11□□□□□ -1.43
SDF2-205ENST00000587629 FOPNLQ96NB1 174 aa6.11□□□□□ -1.43
SDF2-205ENST00000587629 ZNF285Q96NJ3 590 aa6.11□□□□□ -1.43
SDF2-205ENST00000587629 PANX3Q96QZ0 392 aa6.11□□□□□ -1.43
SDF2-205ENST00000587629 TAAR6Q96RI8 345 aa6.11□□□□□ -1.43
SDF2-205ENST00000587629 LMF1Q96S06 567 aa6.11□□□□□ -1.43
SDF2-205ENST00000587629 RAB11FIP5Q9BXF6 653 aa6.11□□□□□ -1.43
SDF2-205ENST00000587629 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.11□□□□□ -1.43
SDF2-205ENST00000587629 RBSNQ9H1K0 784 aa6.11□□□□□ -1.43
SDF2-205ENST00000587629 P2RY12Q9H244 342 aa6.11□□□□□ -1.43
SDF2-205ENST00000587629 SYNPO2LQ9H987 977 aa6.11□□□□□ -1.43
SDF2-205ENST00000587629 IL1RAPL1Q9NZN1 696 aa6.11□□□□□ -1.43
SDF2-205ENST00000587629 TRPC4Q9UBN4 977 aa6.11□□□□□ -1.43
SDF2-205ENST00000587629 SH3BGRL2Q9UJC5 107 aa6.11□□□□□ -1.43
SDF2-205ENST00000587629 GNPTGQ9UJJ9 305 aa6.11□□□□□ -1.43
SDF2-205ENST00000587629 RIMKLBQ9ULI2 386 aa6.11□□□□□ -1.43
SDF2-205ENST00000587629 CRYL1Q9Y2S2 319 aa6.11□□□□□ -1.43
SDF2-205ENST00000587629 FAM169AQ9Y6X4 670 aa6.11□□□□□ -1.43
SDF2-205ENST00000587629 SNRNP200O75643 2136 aaKnown RBP6.11□□□□□ -1.43
SDF2-205ENST00000587629 A0A0A6YYC8 382 aaPredicted RBP6.1□□□□□ -1.43
SDF2-205ENST00000587629 TRGV8A0A0C4DH27 118 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 IGKV1-8A0A0C4DH67 115 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 A0A1B0GUH1 482 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 DYTNA2CJ06 578 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 OR2A25A4D2G3 310 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 ARHGEF33A8MVX0 844 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 I3L1I5 382 aaPredicted RBP6.1□□□□□ -1.43
SDF2-205ENST00000587629 KPNA5O15131 536 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 WFS1O76024 890 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 WISP2O76076 250 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 USP1O94782 785 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 UNC5CO95185 931 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 WDPCPO95876 746 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 SYF2O95926 243 aaKnown RBP6.1□□□□□ -1.43
SDF2-205ENST00000587629 HEXBP07686 556 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 SNRPB2P08579 225 aaKnown RBP6.1□□□□□ -1.43
SDF2-205ENST00000587629 ANXA5P08758 320 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 ITGAMP11215 1152 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 COX6A1P12074 109 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 CXCR2P25025 360 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 MGAT1P26572 445 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 GRNP28799 593 aaKnown RBP6.1□□□□□ -1.43
SDF2-205ENST00000587629 CMPK1P30085 196 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 CCNFP41002 786 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 SNRPNP63162 240 aaKnown RBP6.1□□□□□ -1.43
SDF2-205ENST00000587629 MAT1AQ00266 395 aaKnown RBP6.1□□□□□ -1.43
SDF2-205ENST00000587629 TRIP13Q15645 432 aaPredicted RBP6.1□□□□□ -1.43
SDF2-205ENST00000587629 MUM1Q2TAK8 710 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 ACSBG2Q5FVE4 666 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.1□□□□□ -1.43
SDF2-205ENST00000587629 MFSD4BQ5TF39 518 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 PRMT9Q6P2P2 845 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 LRRC8BQ6P9F7 803 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 GFRALQ6UXV0 394 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 RNF44Q7L0R7 432 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 GSTA5Q7RTV2 222 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 ADCK2Q7Z695 626 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 SDCCAG8Q86SQ7 713 aaPredicted RBP6.1□□□□□ -1.43
SDF2-205ENST00000587629 TICAM1Q8IUC6 712 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 PLD3Q8IV08 490 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 TMEM139Q8IV31 216 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 SHISA5Q8N114 240 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 CSNK1A1LQ8N752 337 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 OR9A1PQ8NGU1 263 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 COG1Q8WTW3 980 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 PSMF1Q92530 271 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 MFSD3Q96ES6 412 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 MRFAP1L1Q96HT8 127 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 BIRC8Q96P09 236 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 ZFYVE21Q9BQ24 234 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 MACROD1Q9BQ69 325 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 SLX1AQ9BQ83 275 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 TRIM56Q9BRZ2 755 aaKnown RBP6.1□□□□□ -1.43
SDF2-205ENST00000587629 MRPS30Q9NP92 439 aaKnown RBP6.1□□□□□ -1.43
SDF2-205ENST00000587629 TREX1Q9NSU2 369 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 SYBUQ9NX95 663 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 BFARQ9NZS9 450 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 PAK5Q9P286 719 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 COPG2Q9UBF2 871 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 TAC3Q9UHF0 121 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 MKL2Q9ULH7 1088 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 GUCA1BQ9UMX6 200 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 RUVBL1Q9Y265 456 aaKnown RBP6.1□□□□□ -1.43
SDF2-205ENST00000587629 CSMD1Q96PZ7 3565 aa6.1□□□□□ -1.43
SDF2-205ENST00000587629 IGHV1-45A0A0A0MS14 117 aa6.09□□□□□ -1.43
SDF2-205ENST00000587629 TRAV17A0A0B4J275 112 aa6.09□□□□□ -1.43
SDF2-205ENST00000587629 IGHV3-20A0A0C4DH32 117 aa6.09□□□□□ -1.43
SDF2-205ENST00000587629 TCRBV7S3A2A0A539 114 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms