RNA–Protein interactions for RNA: ENST00000585879.1

RPRD1A-203, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 425 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-203ENST00000585879 KIRREL3Q8IZU9 778 aa3.33□□□□□ -1.88
RPRD1A-203ENST00000585879 LGI2Q8N0V4 545 aa3.33□□□□□ -1.88
RPRD1A-203ENST00000585879 RYBPQ8N488 228 aaPredicted RBP3.33□□□□□ -1.88
RPRD1A-203ENST00000585879 ZNF611Q8N823 705 aa3.33□□□□□ -1.88
RPRD1A-203ENST00000585879 OR4K1Q8NGD4 311 aa3.33□□□□□ -1.88
RPRD1A-203ENST00000585879 HPSE2Q8WWQ2 592 aa3.33□□□□□ -1.88
RPRD1A-203ENST00000585879 DYRK2Q92630 601 aa3.33□□□□□ -1.88
RPRD1A-203ENST00000585879 ARSGQ96EG1 525 aa3.33□□□□□ -1.88
RPRD1A-203ENST00000585879 SPATA33Q96N06 139 aa3.33□□□□□ -1.88
RPRD1A-203ENST00000585879 FOXN4Q96NZ1 517 aa3.33□□□□□ -1.88
RPRD1A-203ENST00000585879 ZNF300Q96RE9 604 aaPredicted RBP3.33□□□□□ -1.88
RPRD1A-203ENST00000585879 IWS1Q96ST2 819 aa3.33□□□□□ -1.88
RPRD1A-203ENST00000585879 CCDC3Q9BQI4 270 aa3.33□□□□□ -1.88
RPRD1A-203ENST00000585879 SLC25A23Q9BV35 468 aa3.33□□□□□ -1.88
RPRD1A-203ENST00000585879 SHARPINQ9H0F6 387 aa3.33□□□□□ -1.88
RPRD1A-203ENST00000585879 FZD8Q9H461 694 aa3.33□□□□□ -1.88
RPRD1A-203ENST00000585879 CDH20Q9HBT6 801 aa3.33□□□□□ -1.88
RPRD1A-203ENST00000585879 TBC1D7Q9P0N9 293 aa3.33□□□□□ -1.88
RPRD1A-203ENST00000585879 TRIM17Q9Y577 477 aa3.33□□□□□ -1.88
RPRD1A-203ENST00000585879 A0A087WW49 117 aa3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 A0A1W2PPK0 400 aa3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 DFFBO76075 338 aa3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 GSRP00390 522 aa3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 RAF1P04049 648 aa3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 CSN3P07498 182 aa3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 FAM157CP0CG43 387 aa3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 EPCAMP16422 314 aa3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 LHCGRP22888 699 aa3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 CSTF2P33240 577 aaKnown RBP eCLIP3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 MAZP56270 477 aaKnown RBP3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 POLR2LP62875 67 aaKnown RBP3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 HYAL4Q2M3T9 481 aa3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 SLC35D3Q5M8T2 416 aa3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 ADAMTSL4-AS1Q5T5F5 129 aa3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 TMEM207Q6UWW9 146 aa3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 CCDC186Q7Z3E2 898 aa3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 SLFN11Q7Z7L1 901 aa3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 CDC20BQ86Y33 519 aa3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 NIPA2Q8N8Q9 360 aa3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 GPRC5AQ8NFJ5 357 aa3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 KCNE4Q8WWG9 221 aa3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 PROX1Q92786 737 aa3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 C18orf12Q96KH6 178 aa3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 RMDN2Q96LZ7 410 aa3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 FER1L6-AS2Q96M78 137 aa3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 FEVQ99581 238 aa3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 PIGQQ9BRB3 760 aa3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 KATNB1Q9BVA0 655 aa3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 GTPBP2Q9BX10 602 aaKnown RBP3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 XAB2Q9HCS7 855 aaKnown RBP3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 CHST11Q9NPF2 352 aa3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 PPANQ9NQ55 473 aaKnown RBP3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 C19orf25Q9UFG5 118 aaPredicted RBP3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 GRID1Q9ULK0 1009 aa3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 PPP2R2CQ9Y2T4 447 aa3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 CSAG2Q9Y5P2 127 aa3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 LIPGQ9Y5X9 500 aa3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 R4GN57 208 aa3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 PCNX3Q9H6A9 2034 aa3.32□□□□□ -1.88
RPRD1A-203ENST00000585879 CCL24O00175 119 aa3.31□□□□□ -1.88
RPRD1A-203ENST00000585879 KLF11O14901 512 aa3.31□□□□□ -1.88
RPRD1A-203ENST00000585879 RPS6KA5O75582 802 aa3.31□□□□□ -1.88
RPRD1A-203ENST00000585879 AP2A2O94973 939 aa3.31□□□□□ -1.88
RPRD1A-203ENST00000585879 CLDN1O95832 211 aa3.31□□□□□ -1.88
RPRD1A-203ENST00000585879 KRTAP1-4P0C5Y4 121 aa3.31□□□□□ -1.88
RPRD1A-203ENST00000585879 TYMPP19971 482 aa3.31□□□□□ -1.88
RPRD1A-203ENST00000585879 SHC1P29353 583 aa3.31□□□□□ -1.88
RPRD1A-203ENST00000585879 PRKCIP41743 596 aa3.31□□□□□ -1.88
RPRD1A-203ENST00000585879 SLC6A12P48065 614 aa3.31□□□□□ -1.88
RPRD1A-203ENST00000585879 KLC1Q07866 573 aa3.31□□□□□ -1.88
RPRD1A-203ENST00000585879 NONOQ15233 471 aaKnown RBP eCLIP3.31□□□□□ -1.88
RPRD1A-203ENST00000585879 LBHQ53QV2 105 aaPredicted RBP3.31□□□□□ -1.88
RPRD1A-203ENST00000585879 C20orf194Q5TEA3 1177 aa3.31□□□□□ -1.88
RPRD1A-203ENST00000585879 OR4A47Q6IF82 309 aa3.31□□□□□ -1.88
RPRD1A-203ENST00000585879 ENPP7Q6UWV6 458 aa3.31□□□□□ -1.88
RPRD1A-203ENST00000585879 BTN2A1Q7KYR7 527 aa3.31□□□□□ -1.88
RPRD1A-203ENST00000585879 LACC1Q8IV20 430 aa3.31□□□□□ -1.88
RPRD1A-203ENST00000585879 MAML2Q8IZL2 1156 aaPredicted RBP3.31□□□□□ -1.88
RPRD1A-203ENST00000585879 CCAR2Q8N163 923 aaKnown RBP3.31□□□□□ -1.88
RPRD1A-203ENST00000585879 RASGEF1AQ8N9B8 481 aa3.31□□□□□ -1.88
RPRD1A-203ENST00000585879 IQUBQ8NA54 791 aa3.31□□□□□ -1.88
RPRD1A-203ENST00000585879 Q8NFD4 153 aa3.31□□□□□ -1.88
RPRD1A-203ENST00000585879 SMAP2Q8WU79 429 aaPredicted RBP3.31□□□□□ -1.88
RPRD1A-203ENST00000585879 SNRNP27Q8WVK2 155 aaKnown RBP3.31□□□□□ -1.88
RPRD1A-203ENST00000585879 SIPA1Q96FS4 1042 aa3.31□□□□□ -1.88
RPRD1A-203ENST00000585879 C4orf45Q96LM5 186 aa3.31□□□□□ -1.88
RPRD1A-203ENST00000585879 ZMYND12Q9H0C1 365 aa3.31□□□□□ -1.88
RPRD1A-203ENST00000585879 P2RY12Q9H244 342 aa3.31□□□□□ -1.88
RPRD1A-203ENST00000585879 TLE6Q9H808 572 aa3.31□□□□□ -1.88
RPRD1A-203ENST00000585879 PLCXD1Q9NUJ7 323 aa3.31□□□□□ -1.88
RPRD1A-203ENST00000585879 ATAD3AQ9NVI7 634 aa3.31□□□□□ -1.88
RPRD1A-203ENST00000585879 CHCHD3Q9NX63 227 aaKnown RBP3.31□□□□□ -1.88
RPRD1A-203ENST00000585879 KLHL8Q9P2G9 620 aaPredicted RBP3.31□□□□□ -1.88
RPRD1A-203ENST00000585879 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.31□□□□□ -1.88
RPRD1A-203ENST00000585879 POLLQ9UGP5 575 aa3.31□□□□□ -1.88
RPRD1A-203ENST00000585879 WDR37Q9Y2I8 494 aa3.31□□□□□ -1.88
RPRD1A-203ENST00000585879 CCL27Q9Y4X3 112 aa3.31□□□□□ -1.88
RPRD1A-203ENST00000585879 RECQL5O94762 991 aaPredicted RBP3.3□□□□□ -1.88
RPRD1A-203ENST00000585879 BAG3O95817 575 aa3.3□□□□□ -1.88
RPRD1A-203ENST00000585879 CENPBP07199 599 aaPredicted RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms