RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 RIT1Q92963 219 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 HEPHQ9BQS7 1158 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 WACQ9BTA9 647 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 ZNF395Q9H8N7 513 aaPredicted RBP12.73□□□□□ -0.37
RNF43-208ENST00000584437 YJEFN3A6XGL0 299 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 INMT-MINDY4F8WBC2 141 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 PIGRP01833 764 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 OR4Q2P0C623 313 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 RPS3P23396 243 aaKnown RBP eCLIP12.73□□□□□ -0.37
RNF43-208ENST00000584437 ZMYND11Q15326 602 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 BTBD16Q32M84 506 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 CRY2Q49AN0 593 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 EMC10Q5UCC4 262 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 OR4F3Q6IEY1 312 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 CHST9Q7L1S5 443 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 FAM46DQ8NEK8 389 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 THRSPQ92748 146 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 NXPE2Q96DL1 559 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 TBX5Q99593 518 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 OSER1Q9NX31 292 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 EMC3Q9P0I2 261 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 DEC1Q9P2X7 70 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 PLIN4Q96Q06 1357 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 FOSL2P15408 326 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 NPR2P20594 1047 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 CDK6Q00534 326 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 LSAMPQ13449 338 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 NPY5RQ15761 445 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 CTC1Q2NKJ3 1217 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 ANKRD26P1Q6NSI1 321 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 ZNF367Q7RTV3 350 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 CCDC106Q9BWC9 280 aa12.73□□□□□ -0.37
RNF43-208ENST00000584437 EXOSC1Q9Y3B2 195 aaKnown RBP12.73□□□□□ -0.37
RNF43-208ENST00000584437 TBC1D3DA0A087WVF3 549 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 TBC1D3IA0A087WXS9 549 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 TBC1D3EA0A087X179 549 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 TBC1D3KA0A087X1G2 549 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 TBC1D3FA6NER0 549 aaPredicted RBP12.72□□□□□ -0.37
RNF43-208ENST00000584437 TBC1D3LB9A6J9 549 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 AHSGP02765 367 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 TBC1D3HP0C7X1 549 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 PROZP22891 400 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 UFM1P61960 85 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 TCEAL1Q15170 157 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 UBXN11Q5T124 520 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 TBC1D3GQ6DHY5 549 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 TBC1D3CQ6IPX1 549 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 SYVN1Q86TM6 617 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 TBC1D3Q8IZP1 549 aaPredicted RBP12.72□□□□□ -0.37
RNF43-208ENST00000584437 FIBCD1Q8N539 461 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 CDK15Q96Q40 435 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 BARD1Q99728 777 aaKnown RBP12.72□□□□□ -0.37
RNF43-208ENST00000584437 ENAMQ9NRM1 1142 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.72□□□□□ -0.37
RNF43-208ENST00000584437 HAS3O00219 553 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 CSNK2A2P19784 350 aaPredicted RBP12.72□□□□□ -0.37
RNF43-208ENST00000584437 EDNRAP25101 427 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 NCBP2P52298 156 aaKnown RBP eCLIP12.72□□□□□ -0.374e-15■■□□□ 11.7
RNF43-208ENST00000584437 DSG2Q14126 1118 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 GARNL3Q5VVW2 1013 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 CDKN2AIPNLQ96HQ2 116 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 HSH2DQ96JZ2 352 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 COL5A2P05997 1499 aaPredicted RBP12.72□□□□□ -0.37
RNF43-208ENST00000584437 IRAK2O43187 625 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 B3GALT2O43825 422 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 UBXN7O94888 489 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 CBSLP0DN79 551 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 CBSP35520 551 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 AVPR1BP47901 424 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 VAMP2P63027 116 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 PUM1Q14671 1186 aaKnown RBP eCLIP12.72□□□□□ -0.37
RNF43-208ENST00000584437 SLC10A6Q3KNW5 377 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 SLC24A5Q71RS6 500 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 IQCHQ86VS3 1027 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 GHDCQ8N2G8 530 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 OR13C4Q8NGS5 318 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 FAM110BQ8TC76 370 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 RANBP3Q9H6Z4 567 aaPredicted RBP12.72□□□□□ -0.37
RNF43-208ENST00000584437 XPNPEP1Q9NQW7 623 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 ERVW-1Q9UQF0 538 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 FCF1Q9Y324 198 aaKnown RBP12.72□□□□□ -0.37
RNF43-208ENST00000584437 ST14Q9Y5Y6 855 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 ELOA3DA6NLF2 546 aaPredicted RBP12.72□□□□□ -0.37
RNF43-208ENST00000584437 HLA-DQB2P05538 268 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 PSMA6P60900 246 aaKnown RBP12.72□□□□□ -0.37
RNF43-208ENST00000584437 ZNF33AQ06730 810 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 MOGSQ13724 837 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 ELOA3BQ3SY89 546 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 ATAT1Q5SQI0 421 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 MEDAGQ5VYS4 303 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 GOLM1Q8NBJ4 401 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 ELOA3Q8NG57 546 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 TMED9Q9BVK6 235 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 DERL2Q9GZP9 239 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 FZD8Q9H461 694 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 CD84Q9UIB8 345 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 HCN4Q9Y3Q4 1203 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 FBP2O00757 339 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 NIPSNAP2O75323 286 aa12.72□□□□□ -0.37
RNF43-208ENST00000584437 GLUD1P00367 558 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms